RNA–Protein interactions for RNA: ENST00000296181.8

ITGB5-201, Transcript of integrin subunit beta 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB5, Length 4,372 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-201ENST00000296181 PLCB2Q00722 1185 aa23.39■■□□□ 1.34
ITGB5-201ENST00000296181 FOXD4L1Q9NU39 408 aa23.39■■□□□ 1.34
ITGB5-201ENST00000296181 PLEKHG5O94827 1062 aa23.39■■□□□ 1.33
ITGB5-201ENST00000296181 PMFBP1Q8TBY8 1022 aa23.39■■□□□ 1.33
ITGB5-201ENST00000296181 POGKQ9P215 609 aa23.38■■□□□ 1.33
ITGB5-201ENST00000296181 POLA1P09884 1462 aaPredicted RBP23.38■■□□□ 1.33
ITGB5-201ENST00000296181 APBB1O00213 710 aa23.38■■□□□ 1.33
ITGB5-201ENST00000296181 TIAM1Q13009 1591 aa23.36■■□□□ 1.33
ITGB5-201ENST00000296181 KIF3BO15066 747 aa23.36■■□□□ 1.33
ITGB5-201ENST00000296181 SKAP1Q86WV1 359 aa23.36■■□□□ 1.33
ITGB5-201ENST00000296181 SRPK2P78362 688 aaKnown RBP23.36■■□□□ 1.33
ITGB5-201ENST00000296181 BACH2Q9BYV9 841 aa23.36■■□□□ 1.33
ITGB5-201ENST00000296181 HFM1A2PYH4 1435 aa23.35■■□□□ 1.33
ITGB5-201ENST00000296181 SMC4Q9NTJ3 1288 aa23.35■■□□□ 1.33
ITGB5-201ENST00000296181 ZBTB7CA1YPR0 619 aa23.35■■□□□ 1.33
ITGB5-201ENST00000296181 CASC1Q6TDU7 716 aa23.35■■□□□ 1.33
ITGB5-201ENST00000296181 ADAMTS8Q9UP79 889 aa23.34■■□□□ 1.33
ITGB5-201ENST00000296181 HMGXB3Q12766 1538 aa23.34■■□□□ 1.33
ITGB5-201ENST00000296181 TOPBP1Q92547 1522 aa23.33■■□□□ 1.33
ITGB5-201ENST00000296181 CCDC144AA2RUR9 1427 aa23.33■■□□□ 1.33
ITGB5-201ENST00000296181 MSNP26038 577 aaKnown RBP23.33■■□□□ 1.32
ITGB5-201ENST00000296181 STK26Q9P289 416 aa23.32■■□□□ 1.32
ITGB5-201ENST00000296181 ARID3AQ99856 593 aa23.32■■□□□ 1.32
ITGB5-201ENST00000296181 FRAT2O75474 233 aaPredicted RBP23.31■■□□□ 1.32
ITGB5-201ENST00000296181 FYCO1Q9BQS8 1478 aa23.31■■□□□ 1.32
ITGB5-201ENST00000296181 GBP4Q96PP9 640 aa23.31■■□□□ 1.32
ITGB5-201ENST00000296181 NUTM2DQ5VT03 806 aaPredicted RBP23.29■■□□□ 1.32
ITGB5-201ENST00000296181 BRD4O60885 1362 aaPredicted RBP23.29■■□□□ 1.32
ITGB5-201ENST00000296181 NAIPQ13075 1403 aa23.28■■□□□ 1.32
ITGB5-201ENST00000296181 SMG6Q86US8 1419 aaKnown RBP23.28■■□□□ 1.32
ITGB5-201ENST00000296181 E9PSI1 815 aa23.27■■□□□ 1.32
ITGB5-201ENST00000296181 IPO8O15397 1037 aaKnown RBP23.26■■□□□ 1.31
ITGB5-201ENST00000296181 KANK1Q14678 1352 aa23.26■■□□□ 1.31
ITGB5-201ENST00000296181 PTPRGP23470 1445 aa23.26■■□□□ 1.31
ITGB5-201ENST00000296181 CGNL1Q0VF96 1302 aa23.26■■□□□ 1.31
ITGB5-201ENST00000296181 NBPF1Q3BBV0 1214 aa23.25■■□□□ 1.31
ITGB5-201ENST00000296181 CHMP4BQ9H444 224 aaKnown RBP23.25■■□□□ 1.31
ITGB5-201ENST00000296181 UNC13AQ9UPW8 1703 aa23.25■■□□□ 1.31
ITGB5-201ENST00000296181 SPAG9O60271 1321 aaKnown RBP23.25■■□□□ 1.31
ITGB5-201ENST00000296181 CC2D2AQ9P2K1 1620 aa23.25■■□□□ 1.31
ITGB5-201ENST00000296181 MLECQ14165 292 aa23.24■■□□□ 1.31
ITGB5-201ENST00000296181 PANK1Q8TE04 598 aa23.24■■□□□ 1.31
ITGB5-201ENST00000296181 RSPH6AQ9H0K4 717 aa23.24■■□□□ 1.31
ITGB5-201ENST00000296181 TRAK1Q9UPV9 953 aa23.23■■□□□ 1.31
ITGB5-201ENST00000296181 SOX12O15370 315 aa23.21■■□□□ 1.31
ITGB5-201ENST00000296181 RSPH4AQ5TD94 716 aa23.2■■□□□ 1.3
ITGB5-201ENST00000296181 MAPKBP1O60336 1514 aa23.19■■□□□ 1.3
ITGB5-201ENST00000296181 PEG3Q9GZU2 1588 aa23.19■■□□□ 1.3
ITGB5-201ENST00000296181 C14orf37Q86TY3 774 aa23.17■■□□□ 1.3
ITGB5-201ENST00000296181 ANKRD50Q9ULJ7 1429 aa23.17■■□□□ 1.3
ITGB5-201ENST00000296181 ELL2O00472 640 aaPredicted RBP23.16■■□□□ 1.3
ITGB5-201ENST00000296181 PRDM2Q13029 1718 aa23.16■■□□□ 1.3
ITGB5-201ENST00000296181 HSP90AA2PQ14568 343 aaPredicted RBP23.15■■□□□ 1.3
ITGB5-201ENST00000296181 PRG4Q92954 1404 aaPredicted RBP23.14■■□□□ 1.29
ITGB5-201ENST00000296181 BCAR3O75815 825 aa23.13■■□□□ 1.29
ITGB5-201ENST00000296181 PCF11O94913 1555 aaKnown RBP23.13■■□□□ 1.29
ITGB5-201ENST00000296181 ZKSCAN2Q63HK3 967 aa23.12■■□□□ 1.29
ITGB5-201ENST00000296181 EIF3AQ14152 1382 aaKnown RBP23.12■■□□□ 1.29
ITGB5-201ENST00000296181 VSIG10Q8N0Z9 540 aa23.12■■□□□ 1.29
ITGB5-201ENST00000296181 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.12■■□□□ 1.29
ITGB5-201ENST00000296181 CALD1Q05682 793 aaKnown RBP23.11■■□□□ 1.29
ITGB5-201ENST00000296181 EFCAB5A4FU69 1503 aa23.11■■□□□ 1.29
ITGB5-201ENST00000296181 C20orf194Q5TEA3 1177 aa23.1■■□□□ 1.29
ITGB5-201ENST00000296181 FOXD4L5Q5VV16 416 aaPredicted RBP23.1■■□□□ 1.29
ITGB5-201ENST00000296181 FOXD4L4Q8WXT5 416 aaPredicted RBP23.1■■□□□ 1.29
ITGB5-201ENST00000296181 GRIN2BQ13224 1484 aa23.1■■□□□ 1.29
ITGB5-201ENST00000296181 ANKRD45Q5TZF3 282 aa23.09■■□□□ 1.29
ITGB5-201ENST00000296181 PPP2R1AP30153 589 aa23.08■■□□□ 1.29
ITGB5-201ENST00000296181 CDK13Q14004 1512 aaKnown RBP23.08■■□□□ 1.29
ITGB5-201ENST00000296181 DDX49Q9Y6V7 483 aaKnown RBP23.08■■□□□ 1.29
ITGB5-201ENST00000296181 DDX11L8A8MPP1 907 aa23.08■■□□□ 1.28
ITGB5-201ENST00000296181 MIA2Q96PC5 1412 aa23.08■■□□□ 1.28
ITGB5-201ENST00000296181 NOL8Q76FK4 1167 aaKnown RBP23.07■■□□□ 1.28
ITGB5-201ENST00000296181 CHMP5Q9NZZ3 219 aa23.06■■□□□ 1.28
ITGB5-201ENST00000296181 ABCA10Q8WWZ4 1543 aa23.06■■□□□ 1.28
ITGB5-201ENST00000296181 DNMBPQ6XZF7 1577 aa23.05■■□□□ 1.28
ITGB5-201ENST00000296181 DZIP1LQ8IYY4 767 aaKnown RBP23.04■■□□□ 1.28
ITGB5-201ENST00000296181 HDGFL2Q7Z4V5 671 aaPredicted RBP23.03■■□□□ 1.28
ITGB5-201ENST00000296181 C22orf23Q9BZE7 217 aa23.03■■□□□ 1.28
ITGB5-201ENST00000296181 NCOA1Q15788 1441 aa23.03■■□□□ 1.28
ITGB5-201ENST00000296181 LNPKQ9C0E8 428 aa23.03■■□□□ 1.28
ITGB5-201ENST00000296181 ANKRD30BQ9BXX2 1392 aa23.02■■□□□ 1.28
ITGB5-201ENST00000296181 KCNJ4P48050 445 aa23.02■■□□□ 1.28
ITGB5-201ENST00000296181 AFAP1Q8N556 730 aa23.02■■□□□ 1.28
ITGB5-201ENST00000296181 OS9Q13438 667 aaPredicted RBP23.02■■□□□ 1.28
ITGB5-201ENST00000296181 KIAA1107Q9UPP5 1409 aa23.02■■□□□ 1.28
ITGB5-201ENST00000296181 WASHC2CQ9Y4E1 1318 aa23.02■■□□□ 1.27
ITGB5-201ENST00000296181 PTMSP20962 102 aa23.01■■□□□ 1.27
ITGB5-201ENST00000296181 FOXD4L6Q3SYB3 417 aaPredicted RBP23■■□□□ 1.27
ITGB5-201ENST00000296181 FOXD4L3Q6VB84 417 aaPredicted RBP23■■□□□ 1.27
ITGB5-201ENST00000296181 TAOK2Q9UL54 1235 aa22.99■■□□□ 1.27
ITGB5-201ENST00000296181 MCCP23508 829 aa22.99■■□□□ 1.27
ITGB5-201ENST00000296181 EHBP1L1Q8N3D4 1523 aa22.99■■□□□ 1.27
ITGB5-201ENST00000296181 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.99■■□□□ 1.275e-7■□□□□ 10.6
ITGB5-201ENST00000296181 BIVM-ERCC5R4GMW8 1640 aa22.98■■□□□ 1.27
ITGB5-201ENST00000296181 PDZRN3Q9UPQ7 1066 aa22.98■■□□□ 1.27
ITGB5-201ENST00000296181 PTPRKQ15262 1439 aa22.97■■□□□ 1.27
ITGB5-201ENST00000296181 TCP11L2Q8N4U5 519 aa22.97■■□□□ 1.27
ITGB5-201ENST00000296181 PRKCSHP14314 528 aaPredicted RBP22.97■■□□□ 1.27
ITGB5-201ENST00000296181 EPRSP07814 1512 aaKnown RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms