RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 ADAMTSL3P82987 1691 aa33.84■■■■□ 3.01
LINC01116-201ENST00000295549 KDM4FA0A1W2PPD8 638 aa33.84■■■■□ 3.01
LINC01116-201ENST00000295549 DEPDC5O75140 1603 aa33.82■■■■□ 3
LINC01116-201ENST00000295549 ESF1Q9H501 851 aaKnown RBP33.8■■■■□ 3
LINC01116-201ENST00000295549 MROH1Q8NDA8 1641 aa33.8■■■■□ 3
LINC01116-201ENST00000295549 PRDM15P57071 1507 aaPredicted RBP33.8■■■■□ 3
LINC01116-201ENST00000295549 FAM135AQ9P2D6 1515 aa33.8■■■■□ 3
LINC01116-201ENST00000295549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.79■■■■□ 3
LINC01116-201ENST00000295549 WASHC2CQ9Y4E1 1318 aa33.78■■■■□ 3
LINC01116-201ENST00000295549 CNTLNQ9NXG0 1405 aa33.78■■■■□ 3
LINC01116-201ENST00000295549 KANK1Q14678 1352 aa33.77■■■■□ 3
LINC01116-201ENST00000295549 MADDQ8WXG6 1647 aa33.75■■■□□ 2.99
LINC01116-201ENST00000295549 KDM5DQ9BY66 1539 aa33.75■■■□□ 2.99
LINC01116-201ENST00000295549 ACIN1Q9UKV3 1341 aaKnown RBP33.74■■■□□ 2.99
LINC01116-201ENST00000295549 UNC13BO14795 1591 aa33.74■■■□□ 2.99
LINC01116-201ENST00000295549 HRCP23327 699 aa33.73■■■□□ 2.99
LINC01116-201ENST00000295549 RAB3GAP2Q9H2M9 1393 aa33.73■■■□□ 2.99
LINC01116-201ENST00000295549 VWDEQ8N2E2 1590 aa33.72■■■□□ 2.99
LINC01116-201ENST00000295549 NUP155O75694 1391 aa33.72■■■□□ 2.99
LINC01116-201ENST00000295549 FER1L4A9Z1Z3 1794 aa33.71■■■□□ 2.99
LINC01116-201ENST00000295549 ABCC3O15438 1527 aa33.7■■■□□ 2.99
LINC01116-201ENST00000295549 ZMYM3Q14202 1370 aa33.67■■■□□ 2.98
LINC01116-201ENST00000295549 LMTK2Q8IWU2 1503 aa33.66■■■□□ 2.98
LINC01116-201ENST00000295549 ZC3H13Q5T200 1668 aaKnown RBP33.66■■■□□ 2.98
LINC01116-201ENST00000295549 TRIM52Q96A61 297 aa33.65■■■□□ 2.98
LINC01116-201ENST00000295549 PTPRMP28827 1452 aa33.64■■■□□ 2.98
LINC01116-201ENST00000295549 CLTCQ00610 1675 aaKnown RBP33.64■■■□□ 2.98
LINC01116-201ENST00000295549 RIMS1Q86UR5 1692 aaKnown RBP33.64■■■□□ 2.98
LINC01116-201ENST00000295549 PCGF6Q9BYE7 350 aa33.62■■■□□ 2.97
LINC01116-201ENST00000295549 MROH2AA6NES4 1674 aa33.61■■■□□ 2.97
LINC01116-201ENST00000295549 IQGAP3Q86VI3 1631 aa33.61■■■□□ 2.97
LINC01116-201ENST00000295549 ARHGAP31Q2M1Z3 1444 aa33.58■■■□□ 2.97
LINC01116-201ENST00000295549 CEBPAP49715 358 aaPredicted RBP33.57■■■□□ 2.96
LINC01116-201ENST00000295549 CEP152O94986 1710 aa33.56■■■□□ 2.96
LINC01116-201ENST00000295549 PZPP20742 1482 aa33.54■■■□□ 2.96
LINC01116-201ENST00000295549 CAMSAP1Q5T5Y3 1602 aa33.54■■■□□ 2.96
LINC01116-201ENST00000295549 EFCAB6Q5THR3 1501 aa33.52■■■□□ 2.96
LINC01116-201ENST00000295549 NPATQ14207 1427 aa33.52■■■□□ 2.96
LINC01116-201ENST00000295549 SLC4A1APQ9BWU0 796 aaKnown RBP33.52■■■□□ 2.96
LINC01116-201ENST00000295549 TET3O43151 1660 aa33.52■■■□□ 2.96
LINC01116-201ENST00000295549 C3P01024 1663 aa33.51■■■□□ 2.95
LINC01116-201ENST00000295549 RPRD2Q5VT52 1461 aaKnown RBP33.48■■■□□ 2.95
LINC01116-201ENST00000295549 PLPPR3Q6T4P5 718 aa33.48■■■□□ 2.95
LINC01116-201ENST00000295549 MPHOSPH9Q99550 1183 aa33.48■■■□□ 2.95
LINC01116-201ENST00000295549 FBXO31Q5XUX0 539 aaPredicted RBP33.46■■■□□ 2.95
LINC01116-201ENST00000295549 PKD2Q13563 968 aa33.44■■■□□ 2.94
LINC01116-201ENST00000295549 ERVK-7P63135 1459 aa33.4■■■□□ 2.94
LINC01116-201ENST00000295549 E9PCH4 1651 aa33.39■■■□□ 2.94
LINC01116-201ENST00000295549 SPATA31D1Q6ZQQ2 1576 aa33.38■■■□□ 2.93
LINC01116-201ENST00000295549 NOS1P29475 1434 aa33.38■■■□□ 2.93
LINC01116-201ENST00000295549 TNRQ92752 1358 aa33.36■■■□□ 2.93
LINC01116-201ENST00000295549 PREX1Q8TCU6 1659 aa33.33■■■□□ 2.93
LINC01116-201ENST00000295549 SETD1BQ9UPS6 1966 aaKnown RBP33.32■■■□□ 2.92
LINC01116-201ENST00000295549 PTPRTO14522 1441 aa33.32■■■□□ 2.92
LINC01116-201ENST00000295549 AEBP2Q6ZN18 517 aaPredicted RBP33.3■■■□□ 2.92
LINC01116-201ENST00000295549 FOXD1Q16676 465 aa33.29■■■□□ 2.92
LINC01116-201ENST00000295549 CFAP65Q6ZU64 1925 aaKnown RBP33.28■■■□□ 2.92
LINC01116-201ENST00000295549 SLC52A1Q9NWF4 448 aa33.27■■■□□ 2.92
LINC01116-201ENST00000295549 PLA2R1Q13018 1463 aa33.25■■■□□ 2.91
LINC01116-201ENST00000295549 NLRP1Q9C000 1473 aa33.25■■■□□ 2.91
LINC01116-201ENST00000295549 SYNMO15061 1565 aa33.25■■■□□ 2.91
LINC01116-201ENST00000295549 UHRF1BP1Q6BDS2 1440 aa33.23■■■□□ 2.91
LINC01116-201ENST00000295549 IDI1Q13907 227 aa33.21■■■□□ 2.91
LINC01116-201ENST00000295549 DHX57Q6P158 1386 aaKnown RBP33.2■■■□□ 2.91
LINC01116-201ENST00000295549 TRPM2O94759 1503 aa33.2■■■□□ 2.91
LINC01116-201ENST00000295549 SPHKAPQ2M3C7 1700 aa33.19■■■□□ 2.9
LINC01116-201ENST00000295549 MYO3AQ8NEV4 1616 aa33.18■■■□□ 2.9
LINC01116-201ENST00000295549 A2ML1A8K2U0 1454 aa33.17■■■□□ 2.9
LINC01116-201ENST00000295549 ANKRD30BQ9BXX2 1392 aa33.17■■■□□ 2.9
LINC01116-201ENST00000295549 PIK3C2BO00750 1634 aa33.14■■■□□ 2.89
LINC01116-201ENST00000295549 LMTK3Q96Q04 1460 aa33.13■■■□□ 2.89
LINC01116-201ENST00000295549 CEP170BQ9Y4F5 1589 aaPredicted RBP33.13■■■□□ 2.89
LINC01116-201ENST00000295549 UGGT1Q9NYU2 1555 aa33.12■■■□□ 2.89
LINC01116-201ENST00000295549 CCDC144AA2RUR9 1427 aa33.1■■■□□ 2.89
LINC01116-201ENST00000295549 ZNF142P52746 1687 aaPredicted RBP33.1■■■□□ 2.89
LINC01116-201ENST00000295549 THEMISQ8N1K5 641 aaPredicted RBP33.07■■■□□ 2.88
LINC01116-201ENST00000295549 STAG3Q9UJ98 1225 aa33.06■■■□□ 2.88
LINC01116-201ENST00000295549 CLTCL1P53675 1640 aa33.06■■■□□ 2.88
LINC01116-201ENST00000295549 ADGRB3O60242 1522 aa33.02■■■□□ 2.88
LINC01116-201ENST00000295549 KDM5AP29375 1690 aaKnown RBP33.02■■■□□ 2.88
LINC01116-201ENST00000295549 CHGAP10645 457 aaKnown RBP33■■■□□ 2.87
LINC01116-201ENST00000295549 UBR1Q8IWV7 1749 aa32.99■■■□□ 2.87
LINC01116-201ENST00000295549 HSPA2P54652 639 aa32.99■■■□□ 2.87
LINC01116-201ENST00000295549 TMEM131LA2VDJ0 1609 aa32.99■■■□□ 2.87
LINC01116-201ENST00000295549 TMEM2Q9UHN6 1383 aa32.95■■■□□ 2.86
LINC01116-201ENST00000295549 SPATA31E1Q6ZUB1 1445 aa32.93■■■□□ 2.86
LINC01116-201ENST00000295549 SLIT1O75093 1534 aa32.91■■■□□ 2.86
LINC01116-201ENST00000295549 ARHGAP23Q9P227 1491 aa32.91■■■□□ 2.86
LINC01116-201ENST00000295549 CLSPNQ9HAW4 1339 aa32.91■■■□□ 2.86
LINC01116-201ENST00000295549 NEURL4Q96JN8 1562 aa32.91■■■□□ 2.86
LINC01116-201ENST00000295549 KIF1BO60333 1816 aa32.9■■■□□ 2.86
LINC01116-201ENST00000295549 ZNF326Q5BKZ1 582 aaKnown RBP32.88■■■□□ 2.85
LINC01116-201ENST00000295549 ANKLE2Q86XL3 938 aa32.87■■■□□ 2.85
LINC01116-201ENST00000295549 HDGFP51858 240 aaKnown RBP32.86■■■□□ 2.85
LINC01116-201ENST00000295549 SIN3AQ96ST3 1273 aa32.86■■■□□ 2.85
LINC01116-201ENST00000295549 ZFYVE9O95405 1425 aa32.85■■■□□ 2.85
LINC01116-201ENST00000295549 RPGRIP1LQ68CZ1 1315 aa32.85■■■□□ 2.85
LINC01116-201ENST00000295549 CCER1Q8TC90 406 aaPredicted RBP32.85■■■□□ 2.85
LINC01116-201ENST00000295549 RGL3Q3MIN7 710 aa32.85■■■□□ 2.85
LINC01116-201ENST00000295549 EID1Q9Y6B2 187 aa32.85■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms