RNA–Protein interactions for RNA: ENST00000294785.9

NCSTN-201, Transcript of nicastrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCSTN, Length 2,936 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-201ENST00000294785 LAMC1P11047 1609 aa18.57■□□□□ 0.56
NCSTN-201ENST00000294785 CHD1O14646 1710 aa18.56■□□□□ 0.56
NCSTN-201ENST00000294785 MYO5CQ9NQX4 1742 aa18.56■□□□□ 0.56
NCSTN-201ENST00000294785 SYCP2Q9BX26 1530 aa18.56■□□□□ 0.56
NCSTN-201ENST00000294785 PLEKHH2Q8IVE3 1493 aa18.56■□□□□ 0.56
NCSTN-201ENST00000294785 NUDCQ9Y266 331 aa18.56■□□□□ 0.56
NCSTN-201ENST00000294785 IQGAP3Q86VI3 1631 aa18.55■□□□□ 0.56
NCSTN-201ENST00000294785 CCDC144AA2RUR9 1427 aa18.55■□□□□ 0.56
NCSTN-201ENST00000294785 POLR3GLQ9BT43 218 aa18.55■□□□□ 0.56
NCSTN-201ENST00000294785 TTC37Q6PGP7 1564 aa18.55■□□□□ 0.56
NCSTN-201ENST00000294785 BRD4O60885 1362 aaPredicted RBP18.54■□□□□ 0.56
NCSTN-201ENST00000294785 DCAF11Q8TEB1 546 aa18.54■□□□□ 0.56
NCSTN-201ENST00000294785 PRAG1Q86YV5 1406 aa18.54■□□□□ 0.56
NCSTN-201ENST00000294785 RNF123Q5XPI4 1314 aa18.54■□□□□ 0.56
NCSTN-201ENST00000294785 PNISRQ8TF01 805 aaKnown RBP18.54■□□□□ 0.56
NCSTN-201ENST00000294785 ARHGAP5Q13017 1502 aa18.54■□□□□ 0.56
NCSTN-201ENST00000294785 RALBP1Q15311 655 aa18.53■□□□□ 0.56
NCSTN-201ENST00000294785 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.53■□□□□ 0.56
NCSTN-201ENST00000294785 ST20-MTHFSA0A0A6YYL1 179 aa18.53■□□□□ 0.56
NCSTN-201ENST00000294785 LRPPRCP42704 1394 aaKnown RBP18.52■□□□□ 0.56
NCSTN-201ENST00000294785 EIF2AK4Q9P2K8 1649 aaKnown RBP18.52■□□□□ 0.55
NCSTN-201ENST00000294785 MYBBP1AQ9BQG0 1328 aaKnown RBP18.51■□□□□ 0.55
NCSTN-201ENST00000294785 TMC1Q8TDI8 760 aa18.51■□□□□ 0.55
NCSTN-201ENST00000294785 GPRASP1Q5JY77 1395 aa18.51■□□□□ 0.55
NCSTN-201ENST00000294785 ABCC2Q92887 1545 aa18.51■□□□□ 0.55
NCSTN-201ENST00000294785 KDM2AQ9Y2K7 1162 aa18.5■□□□□ 0.55
NCSTN-201ENST00000294785 MAGI2Q86UL8 1455 aa18.49■□□□□ 0.55
NCSTN-201ENST00000294785 ATP10AO60312 1499 aa18.49■□□□□ 0.55
NCSTN-201ENST00000294785 DUOX2Q9NRD8 1548 aa18.49■□□□□ 0.55
NCSTN-201ENST00000294785 PRDM15P57071 1507 aaPredicted RBP18.48■□□□□ 0.55
NCSTN-201ENST00000294785 PLA2R1Q13018 1463 aa18.47■□□□□ 0.55
NCSTN-201ENST00000294785 ERBINQ96RT1 1412 aa18.46■□□□□ 0.55
NCSTN-201ENST00000294785 B4GALNT3Q6L9W6 998 aa18.46■□□□□ 0.55
NCSTN-201ENST00000294785 A2MP01023 1474 aa18.46■□□□□ 0.55
NCSTN-201ENST00000294785 COL17A1Q9UMD9 1497 aaPredicted RBP18.44■□□□□ 0.54
NCSTN-201ENST00000294785 PARD3Q8TEW0 1356 aa18.44■□□□□ 0.54
NCSTN-201ENST00000294785 WASHC2CQ9Y4E1 1318 aa18.43■□□□□ 0.54
NCSTN-201ENST00000294785 MSH5O43196 834 aa18.43■□□□□ 0.54
NCSTN-201ENST00000294785 ZMYM4Q5VZL5 1548 aa18.42■□□□□ 0.54
NCSTN-201ENST00000294785 RNF17Q9BXT8 1623 aaKnown RBP18.41■□□□□ 0.54
NCSTN-201ENST00000294785 NLRP13Q86W25 1043 aa18.41■□□□□ 0.54
NCSTN-201ENST00000294785 INSRP06213 1382 aa18.41■□□□□ 0.54
NCSTN-201ENST00000294785 CNGB1Q14028 1251 aaPredicted RBP18.4■□□□□ 0.54
NCSTN-201ENST00000294785 PLCH2O75038 1416 aa18.39■□□□□ 0.53
NCSTN-201ENST00000294785 ABCC1P33527 1531 aa18.38■□□□□ 0.53
NCSTN-201ENST00000294785 UHRF1BP1LA0JNW5 1464 aa18.38■□□□□ 0.53
NCSTN-201ENST00000294785 ZCCHC11Q5TAX3 1644 aaKnown RBP18.37■□□□□ 0.53
NCSTN-201ENST00000294785 ERCC6L2Q5T890 1561 aa18.36■□□□□ 0.53
NCSTN-201ENST00000294785 PER1O15534 1290 aaPredicted RBP18.36■□□□□ 0.53
NCSTN-201ENST00000294785 PDE3BQ13370 1112 aa18.36■□□□□ 0.53
NCSTN-201ENST00000294785 CCDC136Q96JN2 1154 aa18.35■□□□□ 0.53
NCSTN-201ENST00000294785 ARAP3Q8WWN8 1544 aa18.35■□□□□ 0.53
NCSTN-201ENST00000294785 NBPF1Q3BBV0 1214 aa18.34■□□□□ 0.53
NCSTN-201ENST00000294785 RGL3Q3MIN7 710 aa18.34■□□□□ 0.53
NCSTN-201ENST00000294785 TESK2Q96S53 571 aa18.34■□□□□ 0.53
NCSTN-201ENST00000294785 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.34■□□□□ 0.53
NCSTN-201ENST00000294785 ERICH6Q7L0X2 663 aa18.33■□□□□ 0.53
NCSTN-201ENST00000294785 EFCAB2Q5VUJ9 269 aa18.32■□□□□ 0.52
NCSTN-201ENST00000294785 DISP3Q9P2K9 1392 aa18.31■□□□□ 0.52
NCSTN-201ENST00000294785 TMF1P82094 1093 aa18.31■□□□□ 0.52
NCSTN-201ENST00000294785 RTEL1-TNFRSF6BF6WH68 1400 aa18.31■□□□□ 0.52
NCSTN-201ENST00000294785 IQGAP1P46940 1657 aa18.31■□□□□ 0.52
NCSTN-201ENST00000294785 MADDQ8WXG6 1647 aa18.3■□□□□ 0.52
NCSTN-201ENST00000294785 CEP152O94986 1710 aa18.3■□□□□ 0.52
NCSTN-201ENST00000294785 CLASP1Q7Z460 1538 aa18.3■□□□□ 0.52
NCSTN-201ENST00000294785 SPHKAPQ2M3C7 1700 aa18.3■□□□□ 0.52
NCSTN-201ENST00000294785 TRPM2O94759 1503 aa18.29■□□□□ 0.52
NCSTN-201ENST00000294785 BLMP54132 1417 aaPredicted RBP18.29■□□□□ 0.52
NCSTN-201ENST00000294785 STAC3Q96MF2 364 aa18.29■□□□□ 0.52
NCSTN-201ENST00000294785 DEPDC5O75140 1603 aa18.29■□□□□ 0.52
NCSTN-201ENST00000294785 RRP1P56182 461 aaKnown RBP18.28■□□□□ 0.52
NCSTN-201ENST00000294785 ZFYVE16Q7Z3T8 1539 aa18.26■□□□□ 0.51
NCSTN-201ENST00000294785 TRAPPC8Q9Y2L5 1435 aa18.25■□□□□ 0.51
NCSTN-201ENST00000294785 RCAN3Q9UKA8 241 aa18.25■□□□□ 0.51
NCSTN-201ENST00000294785 NEURL4Q96JN8 1562 aa18.25■□□□□ 0.51
NCSTN-201ENST00000294785 TET3O43151 1660 aa18.25■□□□□ 0.51
NCSTN-201ENST00000294785 PTPRTO14522 1441 aa18.24■□□□□ 0.51
NCSTN-201ENST00000294785 SCAPERQ9BY12 1400 aa18.24■□□□□ 0.51
NCSTN-201ENST00000294785 PANK3Q9H999 370 aa18.23■□□□□ 0.51
NCSTN-201ENST00000294785 SYNMO15061 1565 aa18.23■□□□□ 0.51
NCSTN-201ENST00000294785 MYT1LQ9UL68 1186 aa18.23■□□□□ 0.51
NCSTN-201ENST00000294785 KIAA1210Q9ULL0 1709 aa18.23■□□□□ 0.51
NCSTN-201ENST00000294785 WDR7Q9Y4E6 1490 aa18.21■□□□□ 0.51
NCSTN-201ENST00000294785 SPAG9O60271 1321 aaKnown RBP18.21■□□□□ 0.51
NCSTN-201ENST00000294785 CLTCL1P53675 1640 aa18.2■□□□□ 0.5
NCSTN-201ENST00000294785 INO80Q9ULG1 1556 aaPredicted RBP18.2■□□□□ 0.5
NCSTN-201ENST00000294785 SCAF11Q99590 1463 aaKnown RBP18.2■□□□□ 0.5
NCSTN-201ENST00000294785 VWDEQ8N2E2 1590 aa18.2■□□□□ 0.5
NCSTN-201ENST00000294785 CDCA8Q53HL2 280 aa18.19■□□□□ 0.5
NCSTN-201ENST00000294785 CC2D1BQ5T0F9 858 aaKnown RBP18.19■□□□□ 0.5
NCSTN-201ENST00000294785 ABCA9Q8IUA7 1624 aa18.19■□□□□ 0.5
NCSTN-201ENST00000294785 SENP3-EIF4A1A0A087X0R7 540 aa18.18■□□□□ 0.5
NCSTN-201ENST00000294785 ATP7AQ04656 1500 aa18.17■□□□□ 0.5
NCSTN-201ENST00000294785 NOP58Q9Y2X3 529 aaKnown RBP18.16■□□□□ 0.5
NCSTN-201ENST00000294785 EIF3AQ14152 1382 aaKnown RBP18.15■□□□□ 0.5
NCSTN-201ENST00000294785 KANK1Q14678 1352 aa18.15■□□□□ 0.5
NCSTN-201ENST00000294785 ANP32AP39687 249 aaKnown RBP18.15■□□□□ 0.5
NCSTN-201ENST00000294785 EXOC6Q8TAG9 804 aa18.15■□□□□ 0.5
NCSTN-201ENST00000294785 MYOM1P52179 1685 aa18.15■□□□□ 0.5
NCSTN-201ENST00000294785 NPC1L1Q9UHC9 1359 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms