RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 MYBBP1AQ9BQG0 1328 aaKnown RBP15.76■□□□□ 0.11
SLC13A3-201ENST00000279027 NLRP13Q86W25 1043 aa15.76■□□□□ 0.11
SLC13A3-201ENST00000279027 CANXP27824 592 aaKnown RBP15.75■□□□□ 0.11
SLC13A3-201ENST00000279027 CCDC146Q8IYE0 955 aa15.75■□□□□ 0.11
SLC13A3-201ENST00000279027 PNISRQ8TF01 805 aaKnown RBP15.74■□□□□ 0.11
SLC13A3-201ENST00000279027 CDCA7LQ96GN5 454 aa15.74■□□□□ 0.11
SLC13A3-201ENST00000279027 STAG3Q9UJ98 1225 aa15.74■□□□□ 0.11
SLC13A3-201ENST00000279027 RCAN3Q9UKA8 241 aa15.73■□□□□ 0.11
SLC13A3-201ENST00000279027 ANP32AP39687 249 aaKnown RBP15.72■□□□□ 0.11
SLC13A3-201ENST00000279027 BCL11AQ9H165 835 aa15.72■□□□□ 0.11
SLC13A3-201ENST00000279027 DNMT1P26358 1616 aaKnown RBP15.72■□□□□ 0.11
SLC13A3-201ENST00000279027 PLEKHH2Q8IVE3 1493 aa15.71■□□□□ 0.11
SLC13A3-201ENST00000279027 TRAK1Q9UPV9 953 aa15.71■□□□□ 0.11
SLC13A3-201ENST00000279027 NUP160Q12769 1436 aa15.71■□□□□ 0.11
SLC13A3-201ENST00000279027 KANK1Q14678 1352 aa15.71■□□□□ 0.1
SLC13A3-201ENST00000279027 EXOC6Q8TAG9 804 aa15.7■□□□□ 0.1
SLC13A3-201ENST00000279027 STK26Q9P289 416 aa15.7■□□□□ 0.1
SLC13A3-201ENST00000279027 CCDC141Q6ZP82 1450 aa15.7■□□□□ 0.1
SLC13A3-201ENST00000279027 TEX14Q8IWB6 1497 aa15.7■□□□□ 0.1
SLC13A3-201ENST00000279027 CFAP70Q5T0N1 1121 aa15.69■□□□□ 0.1
SLC13A3-201ENST00000279027 DAXXQ9UER7 740 aaPredicted RBP15.68■□□□□ 0.1
SLC13A3-201ENST00000279027 CDCA8Q53HL2 280 aa15.67■□□□□ 0.1
SLC13A3-201ENST00000279027 MLECQ14165 292 aa15.67■□□□□ 0.1
SLC13A3-201ENST00000279027 GCC2Q8IWJ2 1684 aa15.66■□□□□ 0.1
SLC13A3-201ENST00000279027 SCAPERQ9BY12 1400 aa15.66■□□□□ 0.1
SLC13A3-201ENST00000279027 TMEM132EQ6IEE7 984 aa15.65■□□□□ 0.1
SLC13A3-201ENST00000279027 SYCP2Q9BX26 1530 aa15.63■□□□□ 0.09
SLC13A3-201ENST00000279027 KDM5BQ9UGL1 1544 aa15.63■□□□□ 0.09
SLC13A3-201ENST00000279027 ADAMTS8Q9UP79 889 aa15.63■□□□□ 0.09
SLC13A3-201ENST00000279027 WASHC2CQ9Y4E1 1318 aa15.62■□□□□ 0.09
SLC13A3-201ENST00000279027 ARID4BQ4LE39 1312 aaPredicted RBP15.62■□□□□ 0.09
SLC13A3-201ENST00000279027 RTL5Q5HYW3 569 aaPredicted RBP15.62■□□□□ 0.09
SLC13A3-201ENST00000279027 ERICH6BQ5W0A0 696 aa15.62■□□□□ 0.09
SLC13A3-201ENST00000279027 PPM1GO15355 546 aaPredicted RBP15.61■□□□□ 0.09
SLC13A3-201ENST00000279027 ZBTB47Q9UFB7 747 aaPredicted RBP15.61■□□□□ 0.09
SLC13A3-201ENST00000279027 DHX29Q7Z478 1369 aaKnown RBP15.61■□□□□ 0.09
SLC13A3-201ENST00000279027 RGS3P49796 1198 aa15.6■□□□□ 0.09
SLC13A3-201ENST00000279027 RRP1P56182 461 aaKnown RBP15.6■□□□□ 0.09
SLC13A3-201ENST00000279027 RRP7AQ9Y3A4 280 aaKnown RBP15.6■□□□□ 0.09
SLC13A3-201ENST00000279027 ITSN2Q9NZM3 1697 aa15.6■□□□□ 0.09
SLC13A3-201ENST00000279027 FRAT1Q92837 279 aaPredicted RBP15.6■□□□□ 0.09
SLC13A3-201ENST00000279027 DISP3Q9P2K9 1392 aa15.6■□□□□ 0.09
SLC13A3-201ENST00000279027 CYB5RLQ6IPT4 315 aa15.59■□□□□ 0.09
SLC13A3-201ENST00000279027 SPATA31E1Q6ZUB1 1445 aa15.59■□□□□ 0.09
SLC13A3-201ENST00000279027 MORC1Q86VD1 984 aa15.59■□□□□ 0.09
SLC13A3-201ENST00000279027 SKAP1Q86WV1 359 aa15.59■□□□□ 0.09
SLC13A3-201ENST00000279027 RAPGEF3O95398 923 aa15.58■□□□□ 0.08
SLC13A3-201ENST00000279027 TRAPPC8Q9Y2L5 1435 aa15.58■□□□□ 0.08
SLC13A3-201ENST00000279027 APAF1O14727 1248 aa15.57■□□□□ 0.08
SLC13A3-201ENST00000279027 OSCARQ8IYS5 282 aa15.57■□□□□ 0.08
SLC13A3-201ENST00000279027 BRD4O60885 1362 aaPredicted RBP15.57■□□□□ 0.08
SLC13A3-201ENST00000279027 ABCC10Q5T3U5 1492 aa15.57■□□□□ 0.08
SLC13A3-201ENST00000279027 CRBNQ96SW2 442 aa15.56■□□□□ 0.08
SLC13A3-201ENST00000279027 SRPK2P78362 688 aaKnown RBP15.56■□□□□ 0.08
SLC13A3-201ENST00000279027 FAM135AQ9P2D6 1515 aa15.56■□□□□ 0.08
SLC13A3-201ENST00000279027 U2SURPO15042 1029 aaKnown RBP15.55■□□□□ 0.08
SLC13A3-201ENST00000279027 ERBINQ96RT1 1412 aa15.55■□□□□ 0.08
SLC13A3-201ENST00000279027 ADGRL2O95490 1459 aa15.55■□□□□ 0.08
SLC13A3-201ENST00000279027 MSH5O43196 834 aa15.55■□□□□ 0.08
SLC13A3-201ENST00000279027 POGKQ9P215 609 aa15.55■□□□□ 0.08
SLC13A3-201ENST00000279027 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.54■□□□□ 0.08
SLC13A3-201ENST00000279027 PPP2R1AP30153 589 aa15.54■□□□□ 0.08
SLC13A3-201ENST00000279027 LAS1LQ9Y4W2 734 aaKnown RBP15.54■□□□□ 0.08
SLC13A3-201ENST00000279027 ESF1Q9H501 851 aaKnown RBP15.53■□□□□ 0.08
SLC13A3-201ENST00000279027 MBD5Q9P267 1494 aa15.53■□□□□ 0.08
SLC13A3-201ENST00000279027 RALGAPBQ86X10 1494 aa15.53■□□□□ 0.08
SLC13A3-201ENST00000279027 TESK2Q96S53 571 aa15.52■□□□□ 0.08
SLC13A3-201ENST00000279027 ERCC6L2Q5T890 1561 aa15.52■□□□□ 0.08
SLC13A3-201ENST00000279027 ADGRF5Q8IZF2 1346 aa15.52■□□□□ 0.08
SLC13A3-201ENST00000279027 GOLGA2Q08379 1002 aa15.52■□□□□ 0.08
SLC13A3-201ENST00000279027 NOP58Q9Y2X3 529 aaKnown RBP15.52■□□□□ 0.08
SLC13A3-201ENST00000279027 ABCA8O94911 1581 aa15.52■□□□□ 0.07
SLC13A3-201ENST00000279027 SMG6Q86US8 1419 aaKnown RBP15.51■□□□□ 0.07
SLC13A3-201ENST00000279027 PRAG1Q86YV5 1406 aa15.51■□□□□ 0.07
SLC13A3-201ENST00000279027 SLC12A5Q9H2X9 1139 aa15.51■□□□□ 0.07
SLC13A3-201ENST00000279027 BCL2L13Q9BXK5 485 aa15.5■□□□□ 0.07
SLC13A3-201ENST00000279027 PDE3BQ13370 1112 aa15.49■□□□□ 0.07
SLC13A3-201ENST00000279027 U2AF1L5P0DN76 240 aaPredicted RBP15.48■□□□□ 0.07
SLC13A3-201ENST00000279027 U2AF1Q01081 240 aaKnown RBP eCLIP15.48■□□□□ 0.07
SLC13A3-201ENST00000279027 PLCH2O75038 1416 aa15.48■□□□□ 0.07
SLC13A3-201ENST00000279027 PER1O15534 1290 aaPredicted RBP15.48■□□□□ 0.07
SLC13A3-201ENST00000279027 EIF3AQ14152 1382 aaKnown RBP15.48■□□□□ 0.07
SLC13A3-201ENST00000279027 CLUAP1Q96AJ1 413 aa15.47■□□□□ 0.07
SLC13A3-201ENST00000279027 CFAP53Q96M91 514 aa15.46■□□□□ 0.07
SLC13A3-201ENST00000279027 SHANK2Q9UPX8 1470 aa15.46■□□□□ 0.07
SLC13A3-201ENST00000279027 C20orf194Q5TEA3 1177 aa15.46■□□□□ 0.07
SLC13A3-201ENST00000279027 CABP2Q9NPB3 220 aa15.46■□□□□ 0.07
SLC13A3-201ENST00000279027 MINK1Q8N4C8 1332 aaPredicted RBP15.46■□□□□ 0.07
SLC13A3-201ENST00000279027 A2MP01023 1474 aa15.46■□□□□ 0.06
SLC13A3-201ENST00000279027 CENPJQ9HC77 1338 aaPredicted RBP15.45■□□□□ 0.06
SLC13A3-201ENST00000279027 SAMD9LQ8IVG5 1584 aa15.45■□□□□ 0.06
SLC13A3-201ENST00000279027 CDC42BPAQ5VT25 1732 aa15.44■□□□□ 0.06
SLC13A3-201ENST00000279027 PLEKHG5O94827 1062 aa15.44■□□□□ 0.06
SLC13A3-201ENST00000279027 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.44■□□□□ 0.06
SLC13A3-201ENST00000279027 NEFMP07197 916 aa15.43■□□□□ 0.06
SLC13A3-201ENST00000279027 UHRF1BP1Q6BDS2 1440 aa15.43■□□□□ 0.06
SLC13A3-201ENST00000279027 SOX12O15370 315 aa15.43■□□□□ 0.06
SLC13A3-201ENST00000279027 PAK3O75914 559 aaPredicted RBP15.43■□□□□ 0.06
SLC13A3-201ENST00000279027 ADGBQ8N7X0 1667 aa15.43■□□□□ 0.06
SLC13A3-201ENST00000279027 FANCAO15360 1455 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms