RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 RPRD2Q5VT52 1461 aaKnown RBP21.02■□□□□ 0.95
TRIM23-202ENST00000274327 DHX29Q7Z478 1369 aaKnown RBP21.02■□□□□ 0.95
TRIM23-202ENST00000274327 TEX14Q8IWB6 1497 aa21■□□□□ 0.95
TRIM23-202ENST00000274327 PPP1R15AO75807 674 aaPredicted RBP20.99■□□□□ 0.95
TRIM23-202ENST00000274327 FRMPD1Q5SYB0 1578 aa20.98■□□□□ 0.95
TRIM23-202ENST00000274327 ABCA6Q8N139 1617 aa20.98■□□□□ 0.95
TRIM23-202ENST00000274327 ZNF316A6NFI3 1004 aaPredicted RBP20.97■□□□□ 0.95
TRIM23-202ENST00000274327 MYT1LQ9UL68 1186 aa20.97■□□□□ 0.95
TRIM23-202ENST00000274327 A2MP01023 1474 aa20.96■□□□□ 0.95
TRIM23-202ENST00000274327 VWDEQ8N2E2 1590 aa20.95■□□□□ 0.94
TRIM23-202ENST00000274327 MROH1Q8NDA8 1641 aa20.95■□□□□ 0.94
TRIM23-202ENST00000274327 RAPGEF3O95398 923 aa20.94■□□□□ 0.94
TRIM23-202ENST00000274327 BCORL1Q5H9F3 1711 aa20.94■□□□□ 0.94
TRIM23-202ENST00000274327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.94■□□□□ 0.94
TRIM23-202ENST00000274327 PRDM15P57071 1507 aaPredicted RBP20.93■□□□□ 0.94
TRIM23-202ENST00000274327 ZMYM4Q5VZL5 1548 aa20.93■□□□□ 0.94
TRIM23-202ENST00000274327 DIP2CQ9Y2E4 1556 aa20.93■□□□□ 0.94
TRIM23-202ENST00000274327 RNF17Q9BXT8 1623 aaKnown RBP20.92■□□□□ 0.94
TRIM23-202ENST00000274327 TET3O43151 1660 aa20.89■□□□□ 0.93
TRIM23-202ENST00000274327 KIF3BO15066 747 aa20.88■□□□□ 0.93
TRIM23-202ENST00000274327 ATP10AO60312 1499 aa20.88■□□□□ 0.93
TRIM23-202ENST00000274327 E9PCH4 1651 aa20.87■□□□□ 0.93
TRIM23-202ENST00000274327 PLA2R1Q13018 1463 aa20.87■□□□□ 0.93
TRIM23-202ENST00000274327 L3MBTL2Q969R5 705 aa20.87■□□□□ 0.93
TRIM23-202ENST00000274327 KANK1Q14678 1352 aa20.86■□□□□ 0.93
TRIM23-202ENST00000274327 LMTK2Q8IWU2 1503 aa20.84■□□□□ 0.93
TRIM23-202ENST00000274327 YEATS2Q9ULM3 1422 aa20.84■□□□□ 0.93
TRIM23-202ENST00000274327 AEBP2Q6ZN18 517 aaPredicted RBP20.82■□□□□ 0.92
TRIM23-202ENST00000274327 CEP152O94986 1710 aa20.8■□□□□ 0.92
TRIM23-202ENST00000274327 CCDC144AA2RUR9 1427 aa20.8■□□□□ 0.92
TRIM23-202ENST00000274327 SPHKAPQ2M3C7 1700 aa20.79■□□□□ 0.92
TRIM23-202ENST00000274327 COL17A1Q9UMD9 1497 aaPredicted RBP20.79■□□□□ 0.92
TRIM23-202ENST00000274327 REREQ9P2R6 1566 aa20.79■□□□□ 0.92
TRIM23-202ENST00000274327 PTPRTO14522 1441 aa20.78■□□□□ 0.92
TRIM23-202ENST00000274327 EFCAB6Q5THR3 1501 aa20.78■□□□□ 0.92
TRIM23-202ENST00000274327 TRPM2O94759 1503 aa20.78■□□□□ 0.92
TRIM23-202ENST00000274327 DNAJC5Q9H3Z4 198 aa20.76■□□□□ 0.91
TRIM23-202ENST00000274327 ABCC3O15438 1527 aa20.73■□□□□ 0.91
TRIM23-202ENST00000274327 NBPF8Q3BBV2 869 aa20.73■□□□□ 0.91
TRIM23-202ENST00000274327 UHRF1BP1Q6BDS2 1440 aa20.72■□□□□ 0.91
TRIM23-202ENST00000274327 AGLP35573 1532 aa20.72■□□□□ 0.91
TRIM23-202ENST00000274327 ARHGEF40Q8TER5 1519 aa20.72■□□□□ 0.91
TRIM23-202ENST00000274327 DIEXFQ68CQ4 756 aaKnown RBP20.71■□□□□ 0.91
TRIM23-202ENST00000274327 ZC3H13Q5T200 1668 aaKnown RBP20.71■□□□□ 0.91
TRIM23-202ENST00000274327 CLTCL1P53675 1640 aa20.7■□□□□ 0.9
TRIM23-202ENST00000274327 GGT6Q6P531 493 aa20.7■□□□□ 0.9
TRIM23-202ENST00000274327 CAMSAP1Q5T5Y3 1602 aa20.69■□□□□ 0.9
TRIM23-202ENST00000274327 SPATA31E1Q6ZUB1 1445 aa20.67■□□□□ 0.9
TRIM23-202ENST00000274327 SIGLEC1Q9BZZ2 1709 aa20.67■□□□□ 0.9
TRIM23-202ENST00000274327 NEURL4Q96JN8 1562 aa20.66■□□□□ 0.9
TRIM23-202ENST00000274327 NPATQ14207 1427 aa20.66■□□□□ 0.9
TRIM23-202ENST00000274327 WASHC2CQ9Y4E1 1318 aa20.64■□□□□ 0.89
TRIM23-202ENST00000274327 ARHGAP31Q2M1Z3 1444 aa20.63■□□□□ 0.89
TRIM23-202ENST00000274327 RALGAPBQ86X10 1494 aa20.62■□□□□ 0.89
TRIM23-202ENST00000274327 DCAF11Q8TEB1 546 aa20.62■□□□□ 0.89
TRIM23-202ENST00000274327 CNTLNQ9NXG0 1405 aa20.6■□□□□ 0.89
TRIM23-202ENST00000274327 KIF1BO60333 1816 aa20.6■□□□□ 0.89
TRIM23-202ENST00000274327 CFAP65Q6ZU64 1925 aaKnown RBP20.6■□□□□ 0.89
TRIM23-202ENST00000274327 UGGT1Q9NYU2 1555 aa20.59■□□□□ 0.89
TRIM23-202ENST00000274327 NOS1P29475 1434 aa20.59■□□□□ 0.89
TRIM23-202ENST00000274327 PRAG1Q86YV5 1406 aa20.59■□□□□ 0.89
TRIM23-202ENST00000274327 RGL3Q3MIN7 710 aa20.58■□□□□ 0.89
TRIM23-202ENST00000274327 PPP6R1Q9UPN7 881 aa20.58■□□□□ 0.89
TRIM23-202ENST00000274327 TRHP20396 242 aaPredicted RBP20.57■□□□□ 0.88
TRIM23-202ENST00000274327 TRPM1Q7Z4N2 1603 aa20.57■□□□□ 0.88
TRIM23-202ENST00000274327 HSPA5P11021 654 aaKnown RBP20.57■□□□□ 0.88
TRIM23-202ENST00000274327 EIF4G2P78344 907 aaKnown RBP eCLIP20.57■□□□□ 0.88
TRIM23-202ENST00000274327 KDM2AQ9Y2K7 1162 aa20.57■□□□□ 0.88
TRIM23-202ENST00000274327 HIRIP3Q9BW71 556 aaPredicted RBP20.56■□□□□ 0.88
TRIM23-202ENST00000274327 PIK3C2BO00750 1634 aa20.55■□□□□ 0.88
TRIM23-202ENST00000274327 MROH2AA6NES4 1674 aa20.55■□□□□ 0.88
TRIM23-202ENST00000274327 SYNMO15061 1565 aa20.55■□□□□ 0.88
TRIM23-202ENST00000274327 ZNF326Q5BKZ1 582 aaKnown RBP20.55■□□□□ 0.88
TRIM23-202ENST00000274327 PREX1Q8TCU6 1659 aa20.53■□□□□ 0.88
TRIM23-202ENST00000274327 ADGRB3O60242 1522 aa20.53■□□□□ 0.88
TRIM23-202ENST00000274327 IFT172Q9UG01 1749 aa20.53■□□□□ 0.88
TRIM23-202ENST00000274327 CLTCQ00610 1675 aaKnown RBP20.52■□□□□ 0.88
TRIM23-202ENST00000274327 STAC3Q96MF2 364 aa20.52■□□□□ 0.88
TRIM23-202ENST00000274327 MADDQ8WXG6 1647 aa20.52■□□□□ 0.88
TRIM23-202ENST00000274327 PELP1Q8IZL8 1130 aaKnown RBP20.51■□□□□ 0.87
TRIM23-202ENST00000274327 LAMC1P11047 1609 aa20.51■□□□□ 0.87
TRIM23-202ENST00000274327 GPRASP1Q5JY77 1395 aa20.48■□□□□ 0.87
TRIM23-202ENST00000274327 MYOM2P54296 1465 aa20.47■□□□□ 0.87
TRIM23-202ENST00000274327 USP47Q96K76 1375 aa20.47■□□□□ 0.87
TRIM23-202ENST00000274327 POLR1AO95602 1720 aaPredicted RBP20.46■□□□□ 0.87
TRIM23-202ENST00000274327 ERVK-7P63135 1459 aa20.45■□□□□ 0.86
TRIM23-202ENST00000274327 ROCK2O75116 1388 aaKnown RBP20.45■□□□□ 0.86
TRIM23-202ENST00000274327 CARD11Q9BXL7 1154 aa20.45■□□□□ 0.86
TRIM23-202ENST00000274327 PPLO60437 1756 aa20.44■□□□□ 0.86
TRIM23-202ENST00000274327 KIAA1210Q9ULL0 1709 aa20.44■□□□□ 0.86
TRIM23-202ENST00000274327 SPATA31D1Q6ZQQ2 1576 aa20.43■□□□□ 0.86
TRIM23-202ENST00000274327 NRXN1Q9ULB1 1477 aa20.42■□□□□ 0.86
TRIM23-202ENST00000274327 MLECQ14165 292 aa20.42■□□□□ 0.86
TRIM23-202ENST00000274327 SLC52A1Q9NWF4 448 aa20.42■□□□□ 0.86
TRIM23-202ENST00000274327 NBPF1Q3BBV0 1214 aa20.41■□□□□ 0.86
TRIM23-202ENST00000274327 WASHC2AQ641Q2 1341 aa20.4■□□□□ 0.86
TRIM23-202ENST00000274327 DDX10Q13206 875 aaKnown RBP20.4■□□□□ 0.86
TRIM23-202ENST00000274327 MIER1Q8N108 512 aa20.4■□□□□ 0.86
TRIM23-202ENST00000274327 RPGRIP1LQ68CZ1 1315 aa20.4■□□□□ 0.86
TRIM23-202ENST00000274327 IDI1Q13907 227 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms