RNA–Protein interactions for RNA: ENST00000270570.8

SLC47A1-201, Transcript of solute carrier family 47 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC47A1, Length 3,280 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1-201ENST00000270570 NEFMP07197 916 aa17.43■□□□□ 0.38
SLC47A1-201ENST00000270570 PDE4AP27815 886 aa17.43■□□□□ 0.38
SLC47A1-201ENST00000270570 C9orf84Q5VXU9 1444 aa17.42■□□□□ 0.38
SLC47A1-201ENST00000270570 BCORL1Q5H9F3 1711 aa17.42■□□□□ 0.38
SLC47A1-201ENST00000270570 ADAMTS12P58397 1594 aa17.42■□□□□ 0.38
SLC47A1-201ENST00000270570 RALBP1Q15311 655 aa17.41■□□□□ 0.38
SLC47A1-201ENST00000270570 MRC2Q9UBG0 1479 aa17.41■□□□□ 0.38
SLC47A1-201ENST00000270570 KIF14Q15058 1648 aa17.41■□□□□ 0.38
SLC47A1-201ENST00000270570 TNNT2P45379 298 aaPredicted RBP17.41■□□□□ 0.38
SLC47A1-201ENST00000270570 DNMT1P26358 1616 aaKnown RBP17.39■□□□□ 0.37
SLC47A1-201ENST00000270570 PBRM1Q86U86 1689 aa17.39■□□□□ 0.37
SLC47A1-201ENST00000270570 NEUROD2Q15784 382 aa17.39■□□□□ 0.37
SLC47A1-201ENST00000270570 GRIN2AQ12879 1464 aa17.39■□□□□ 0.37
SLC47A1-201ENST00000270570 WDR43Q15061 677 aaKnown RBP eCLIP17.39■□□□□ 0.37
SLC47A1-201ENST00000270570 ADAMTS8Q9UP79 889 aa17.38■□□□□ 0.37
SLC47A1-201ENST00000270570 DAXXQ9UER7 740 aaPredicted RBP17.38■□□□□ 0.37
SLC47A1-201ENST00000270570 IL27Q8NEV9 243 aa17.38■□□□□ 0.37
SLC47A1-201ENST00000270570 CARMIL2Q6F5E8 1435 aa17.37■□□□□ 0.37
SLC47A1-201ENST00000270570 CCDC144AA2RUR9 1427 aa17.37■□□□□ 0.37
SLC47A1-201ENST00000270570 KIAA0556O60303 1618 aa17.37■□□□□ 0.37
SLC47A1-201ENST00000270570 RAPGEF6Q8TEU7 1601 aa17.36■□□□□ 0.37
SLC47A1-201ENST00000270570 CHGAP10645 457 aaKnown RBP17.36■□□□□ 0.37
SLC47A1-201ENST00000270570 KNSTRNQ9Y448 316 aa17.36■□□□□ 0.37
SLC47A1-201ENST00000270570 DISP3Q9P2K9 1392 aa17.34■□□□□ 0.37
SLC47A1-201ENST00000270570 TMF1P82094 1093 aa17.34■□□□□ 0.37
SLC47A1-201ENST00000270570 BRD4O60885 1362 aaPredicted RBP17.33■□□□□ 0.36
SLC47A1-201ENST00000270570 IFT140Q96RY7 1462 aa17.31■□□□□ 0.36
SLC47A1-201ENST00000270570 EIF5BO60841 1220 aaKnown RBP17.29■□□□□ 0.36
SLC47A1-201ENST00000270570 RNF123Q5XPI4 1314 aa17.29■□□□□ 0.36
SLC47A1-201ENST00000270570 TCERG1O14776 1098 aaKnown RBP17.29■□□□□ 0.36
SLC47A1-201ENST00000270570 PTPRGP23470 1445 aa17.28■□□□□ 0.36
SLC47A1-201ENST00000270570 PER1O15534 1290 aaPredicted RBP17.28■□□□□ 0.36
SLC47A1-201ENST00000270570 CANXP27824 592 aaKnown RBP17.28■□□□□ 0.36
SLC47A1-201ENST00000270570 ARXQ96QS3 562 aa17.28■□□□□ 0.36
SLC47A1-201ENST00000270570 ATP10BO94823 1461 aa17.26■□□□□ 0.35
SLC47A1-201ENST00000270570 MAGI1Q96QZ7 1491 aaPredicted RBP17.26■□□□□ 0.35
SLC47A1-201ENST00000270570 BACH2Q9BYV9 841 aa17.26■□□□□ 0.35
SLC47A1-201ENST00000270570 ARID4BQ4LE39 1312 aaPredicted RBP17.26■□□□□ 0.35
SLC47A1-201ENST00000270570 RRP7AQ9Y3A4 280 aaKnown RBP17.25■□□□□ 0.35
SLC47A1-201ENST00000270570 RALGAPBQ86X10 1494 aa17.25■□□□□ 0.35
SLC47A1-201ENST00000270570 KDM5CP41229 1560 aa17.25■□□□□ 0.35
SLC47A1-201ENST00000270570 APAF1O14727 1248 aa17.25■□□□□ 0.35
SLC47A1-201ENST00000270570 AFAP1Q8N556 730 aa17.25■□□□□ 0.35
SLC47A1-201ENST00000270570 FRAT1Q92837 279 aaPredicted RBP17.25■□□□□ 0.35
SLC47A1-201ENST00000270570 MBD5Q9P267 1494 aa17.25■□□□□ 0.35
SLC47A1-201ENST00000270570 TESK2Q96S53 571 aa17.25■□□□□ 0.35
SLC47A1-201ENST00000270570 LRPPRCP42704 1394 aaKnown RBP17.23■□□□□ 0.35
SLC47A1-201ENST00000270570 NUTM2DQ5VT03 806 aaPredicted RBP17.23■□□□□ 0.35
SLC47A1-201ENST00000270570 BCL2L13Q9BXK5 485 aa17.22■□□□□ 0.35
SLC47A1-201ENST00000270570 BCAR3O75815 825 aa17.22■□□□□ 0.35
SLC47A1-201ENST00000270570 EIF4G3O43432 1585 aaKnown RBP17.21■□□□□ 0.35
SLC47A1-201ENST00000270570 PPP2R1AP30153 589 aa17.21■□□□□ 0.35
SLC47A1-201ENST00000270570 PLEKHH2Q8IVE3 1493 aa17.2■□□□□ 0.34
SLC47A1-201ENST00000270570 PDE3BQ13370 1112 aa17.2■□□□□ 0.34
SLC47A1-201ENST00000270570 CEP170Q5SW79 1584 aa17.2■□□□□ 0.34
SLC47A1-201ENST00000270570 GOLGA2Q08379 1002 aa17.19■□□□□ 0.34
SLC47A1-201ENST00000270570 SAFB2Q14151 953 aaKnown RBP eCLIP17.18■□□□□ 0.34
SLC47A1-201ENST00000270570 SPINK5Q9NQ38 1064 aaPredicted RBP17.18■□□□□ 0.34
SLC47A1-201ENST00000270570 PARD3Q8TEW0 1356 aa17.18■□□□□ 0.34
SLC47A1-201ENST00000270570 PRAG1Q86YV5 1406 aa17.17■□□□□ 0.34
SLC47A1-201ENST00000270570 CLUAP1Q96AJ1 413 aa17.17■□□□□ 0.34
SLC47A1-201ENST00000270570 SYNJ2O15056 1496 aa17.17■□□□□ 0.34
SLC47A1-201ENST00000270570 ERBINQ96RT1 1412 aa17.17■□□□□ 0.34
SLC47A1-201ENST00000270570 ARHGAP5Q13017 1502 aa17.16■□□□□ 0.34
SLC47A1-201ENST00000270570 CFAP70Q5T0N1 1121 aa17.16■□□□□ 0.34
SLC47A1-201ENST00000270570 PLEKHH1Q9ULM0 1364 aa17.15■□□□□ 0.34
SLC47A1-201ENST00000270570 KIF3BO15066 747 aa17.15■□□□□ 0.34
SLC47A1-201ENST00000270570 UHRF1BP1Q6BDS2 1440 aa17.15■□□□□ 0.34
SLC47A1-201ENST00000270570 SPRYD3Q8NCJ5 442 aa17.15■□□□□ 0.34
SLC47A1-201ENST00000270570 FAM135AQ9P2D6 1515 aa17.14■□□□□ 0.33
SLC47A1-201ENST00000270570 ADGRL2O95490 1459 aa17.14■□□□□ 0.33
SLC47A1-201ENST00000270570 COG6Q9Y2V7 657 aa17.14■□□□□ 0.33
SLC47A1-201ENST00000270570 DMRT2Q9Y5R5 561 aa17.14■□□□□ 0.33
SLC47A1-201ENST00000270570 PANK1Q8TE04 598 aa17.13■□□□□ 0.33
SLC47A1-201ENST00000270570 DUSP27Q5VZP5 1158 aa17.13■□□□□ 0.33
SLC47A1-201ENST00000270570 ITSN2Q9NZM3 1697 aa17.12■□□□□ 0.33
SLC47A1-201ENST00000270570 BRPF3Q9ULD4 1205 aa17.12■□□□□ 0.33
SLC47A1-201ENST00000270570 A2MP01023 1474 aa17.12■□□□□ 0.33
SLC47A1-201ENST00000270570 SLKQ9H2G2 1235 aaPredicted RBP17.12■□□□□ 0.33
SLC47A1-201ENST00000270570 TRAK1Q9UPV9 953 aa17.12■□□□□ 0.33
SLC47A1-201ENST00000270570 CCDC141Q6ZP82 1450 aa17.12■□□□□ 0.33
SLC47A1-201ENST00000270570 SYCP2Q9BX26 1530 aa17.11■□□□□ 0.33
SLC47A1-201ENST00000270570 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.11■□□□□ 0.33
SLC47A1-201ENST00000270570 SPAG9O60271 1321 aaKnown RBP17.09■□□□□ 0.33
SLC47A1-201ENST00000270570 PLA2R1Q13018 1463 aa17.09■□□□□ 0.33
SLC47A1-201ENST00000270570 NFKBIBQ15653 356 aa17.09■□□□□ 0.33
SLC47A1-201ENST00000270570 EFCAB2Q5VUJ9 269 aa17.09■□□□□ 0.33
SLC47A1-201ENST00000270570 ABCC10Q5T3U5 1492 aa17.08■□□□□ 0.33
SLC47A1-201ENST00000270570 TMEM132EQ6IEE7 984 aa17.08■□□□□ 0.32
SLC47A1-201ENST00000270570 ADGBQ8N7X0 1667 aa17.08■□□□□ 0.32
SLC47A1-201ENST00000270570 MS4A1P11836 297 aa17.08■□□□□ 0.32
SLC47A1-201ENST00000270570 PPM1GO15355 546 aaPredicted RBP17.07■□□□□ 0.32
SLC47A1-201ENST00000270570 AMER1Q5JTC6 1135 aaPredicted RBP17.07■□□□□ 0.32
SLC47A1-201ENST00000270570 DDRGK1Q96HY6 314 aa17.06■□□□□ 0.32
SLC47A1-201ENST00000270570 TNNQ9UQP3 1299 aa17.06■□□□□ 0.32
SLC47A1-201ENST00000270570 CDC42BPAQ5VT25 1732 aa17.06■□□□□ 0.32
SLC47A1-201ENST00000270570 FRAT2O75474 233 aaPredicted RBP17.06■□□□□ 0.32
SLC47A1-201ENST00000270570 RSPH4AQ5TD94 716 aa17.06■□□□□ 0.32
SLC47A1-201ENST00000270570 GGT6Q6P531 493 aa17.05■□□□□ 0.32
SLC47A1-201ENST00000270570 CENPQQ7L2Z9 268 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms