RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 NPM1P06748 294 aaKnown RBP eCLIP32.54■■■□□ 2.8
RAB40B-201ENST00000269347 BCORL1Q5H9F3 1711 aa32.53■■■□□ 2.8
RAB40B-201ENST00000269347 CCDC7Q96M83 1385 aa32.52■■■□□ 2.8
RAB40B-201ENST00000269347 DCAF11Q8TEB1 546 aa32.52■■■□□ 2.8
RAB40B-201ENST00000269347 CCDC144AA2RUR9 1427 aa32.51■■■□□ 2.79
RAB40B-201ENST00000269347 KDM5CP41229 1560 aa32.51■■■□□ 2.79
RAB40B-201ENST00000269347 E9PCH4 1651 aa32.49■■■□□ 2.79
RAB40B-201ENST00000269347 KIDINS220Q9ULH0 1771 aa32.49■■■□□ 2.79
RAB40B-201ENST00000269347 DEPDC5O75140 1603 aa32.48■■■□□ 2.79
RAB40B-201ENST00000269347 ANP32CO43423 234 aa32.48■■■□□ 2.79
RAB40B-201ENST00000269347 RALGAPBQ86X10 1494 aa32.48■■■□□ 2.79
RAB40B-201ENST00000269347 POLR1AO95602 1720 aaPredicted RBP32.47■■■□□ 2.79
RAB40B-201ENST00000269347 KIF7Q2M1P5 1343 aa32.46■■■□□ 2.79
RAB40B-201ENST00000269347 USP47Q96K76 1375 aa32.46■■■□□ 2.79
RAB40B-201ENST00000269347 CD109Q6YHK3 1445 aa32.46■■■□□ 2.79
RAB40B-201ENST00000269347 RGL3Q3MIN7 710 aa32.46■■■□□ 2.79
RAB40B-201ENST00000269347 A2MP01023 1474 aa32.44■■■□□ 2.78
RAB40B-201ENST00000269347 ATP10AO60312 1499 aa32.42■■■□□ 2.78
RAB40B-201ENST00000269347 MROH1Q8NDA8 1641 aa32.41■■■□□ 2.78
RAB40B-201ENST00000269347 CNTLNQ9NXG0 1405 aa32.41■■■□□ 2.78
RAB40B-201ENST00000269347 MYT1LQ9UL68 1186 aa32.39■■■□□ 2.78
RAB40B-201ENST00000269347 CCER2I3L3R5 266 aa32.37■■■□□ 2.77
RAB40B-201ENST00000269347 CYB5RLQ6IPT4 315 aa32.37■■■□□ 2.77
RAB40B-201ENST00000269347 VWDEQ8N2E2 1590 aa32.37■■■□□ 2.77
RAB40B-201ENST00000269347 PRAG1Q86YV5 1406 aa32.36■■■□□ 2.77
RAB40B-201ENST00000269347 DHX29Q7Z478 1369 aaKnown RBP32.36■■■□□ 2.77
RAB40B-201ENST00000269347 KIF3BO15066 747 aa32.36■■■□□ 2.77
RAB40B-201ENST00000269347 TRPM1Q7Z4N2 1603 aa32.36■■■□□ 2.77
RAB40B-201ENST00000269347 CARD11Q9BXL7 1154 aa32.34■■■□□ 2.77
RAB40B-201ENST00000269347 ZNF518AQ6AHZ1 1483 aa32.33■■■□□ 2.77
RAB40B-201ENST00000269347 RIMBP3CA6NJZ7 1639 aa32.33■■■□□ 2.77
RAB40B-201ENST00000269347 RIMBP3BA6NNM3 1639 aa32.33■■■□□ 2.77
RAB40B-201ENST00000269347 RIMBP3Q9UFD9 1639 aa32.33■■■□□ 2.77
RAB40B-201ENST00000269347 NBPF1Q3BBV0 1214 aa32.31■■■□□ 2.76
RAB40B-201ENST00000269347 POGZQ7Z3K3 1410 aa32.31■■■□□ 2.76
RAB40B-201ENST00000269347 TET3O43151 1660 aa32.31■■■□□ 2.76
RAB40B-201ENST00000269347 EIF2AK4Q9P2K8 1649 aaKnown RBP32.3■■■□□ 2.76
RAB40B-201ENST00000269347 SPHKAPQ2M3C7 1700 aa32.3■■■□□ 2.76
RAB40B-201ENST00000269347 PRDM15P57071 1507 aaPredicted RBP32.29■■■□□ 2.76
RAB40B-201ENST00000269347 FRMPD1Q5SYB0 1578 aa32.28■■■□□ 2.76
RAB40B-201ENST00000269347 CLTCL1P53675 1640 aa32.27■■■□□ 2.76
RAB40B-201ENST00000269347 CFAP74Q9C0B2 1584 aa32.27■■■□□ 2.76
RAB40B-201ENST00000269347 CCDC184Q52MB2 194 aa32.26■■■□□ 2.75
RAB40B-201ENST00000269347 TRPM2O94759 1503 aa32.25■■■□□ 2.75
RAB40B-201ENST00000269347 ST20-MTHFSA0A0A6YYL1 179 aa32.25■■■□□ 2.75
RAB40B-201ENST00000269347 PTPRTO14522 1441 aa32.25■■■□□ 2.75
RAB40B-201ENST00000269347 ROCK2O75116 1388 aaKnown RBP32.25■■■□□ 2.75
RAB40B-201ENST00000269347 RAPGEF3O95398 923 aa32.24■■■□□ 2.75
RAB40B-201ENST00000269347 ABCA6Q8N139 1617 aa32.21■■■□□ 2.75
RAB40B-201ENST00000269347 UGGT1Q9NYU2 1555 aa32.21■■■□□ 2.75
RAB40B-201ENST00000269347 CEP152O94986 1710 aa32.21■■■□□ 2.75
RAB40B-201ENST00000269347 POLR3GLQ9BT43 218 aa32.2■■■□□ 2.75
RAB40B-201ENST00000269347 HECW2Q9P2P5 1572 aa32.2■■■□□ 2.74
RAB40B-201ENST00000269347 MAP3K4Q9Y6R4 1608 aa32.2■■■□□ 2.74
RAB40B-201ENST00000269347 MLH3Q9UHC1 1453 aa32.19■■■□□ 2.74
RAB40B-201ENST00000269347 PPRC1Q5VV67 1664 aaKnown RBP32.18■■■□□ 2.74
RAB40B-201ENST00000269347 PRKRIP1Q9H875 184 aaPredicted RBP32.17■■■□□ 2.74
RAB40B-201ENST00000269347 KANK1Q14678 1352 aa32.15■■■□□ 2.74
RAB40B-201ENST00000269347 RNF17Q9BXT8 1623 aaKnown RBP32.15■■■□□ 2.74
RAB40B-201ENST00000269347 GPRASP1Q5JY77 1395 aa32.14■■■□□ 2.74
RAB40B-201ENST00000269347 NEO1Q92859 1461 aa32.14■■■□□ 2.74
RAB40B-201ENST00000269347 EFCAB6Q5THR3 1501 aa32.13■■■□□ 2.73
RAB40B-201ENST00000269347 RICTORQ6R327 1708 aa32.12■■■□□ 2.73
RAB40B-201ENST00000269347 MADDQ8WXG6 1647 aa32.11■■■□□ 2.73
RAB40B-201ENST00000269347 CFAP65Q6ZU64 1925 aaKnown RBP32.1■■■□□ 2.73
RAB40B-201ENST00000269347 LAMC1P11047 1609 aa32.07■■■□□ 2.72
RAB40B-201ENST00000269347 CNGB1Q14028 1251 aaPredicted RBP32.05■■■□□ 2.72
RAB40B-201ENST00000269347 DIP2CQ9Y2E4 1556 aa32.05■■■□□ 2.72
RAB40B-201ENST00000269347 LMTK2Q8IWU2 1503 aa32.04■■■□□ 2.72
RAB40B-201ENST00000269347 GGT6Q6P531 493 aa32.04■■■□□ 2.72
RAB40B-201ENST00000269347 GLI2P10070 1586 aa32.04■■■□□ 2.72
RAB40B-201ENST00000269347 MROH2AA6NES4 1674 aa32.03■■■□□ 2.72
RAB40B-201ENST00000269347 DIP2BQ9P265 1576 aa32.02■■■□□ 2.72
RAB40B-201ENST00000269347 ARID4BQ4LE39 1312 aaPredicted RBP32.02■■■□□ 2.72
RAB40B-201ENST00000269347 YEATS2Q9ULM3 1422 aa32.02■■■□□ 2.72
RAB40B-201ENST00000269347 TESK2Q96S53 571 aa32■■■□□ 2.71
RAB40B-201ENST00000269347 TSPOAP1O95153 1857 aa31.99■■■□□ 2.71
RAB40B-201ENST00000269347 NPATQ14207 1427 aa31.98■■■□□ 2.71
RAB40B-201ENST00000269347 FAM69CQ0P6D2 419 aa31.98■■■□□ 2.71
RAB40B-201ENST00000269347 DISP3Q9P2K9 1392 aa31.97■■■□□ 2.71
RAB40B-201ENST00000269347 KIF1BO60333 1816 aa31.95■■■□□ 2.7
RAB40B-201ENST00000269347 SIGLEC1Q9BZZ2 1709 aa31.95■■■□□ 2.7
RAB40B-201ENST00000269347 ABCC3O15438 1527 aa31.94■■■□□ 2.7
RAB40B-201ENST00000269347 IQGAP1P46940 1657 aa31.92■■■□□ 2.7
RAB40B-201ENST00000269347 IFT172Q9UG01 1749 aa31.91■■■□□ 2.7
RAB40B-201ENST00000269347 COL17A1Q9UMD9 1497 aaPredicted RBP31.91■■■□□ 2.7
RAB40B-201ENST00000269347 NEURL4Q96JN8 1562 aa31.89■■■□□ 2.7
RAB40B-201ENST00000269347 MRS2Q9HD23 443 aa31.89■■■□□ 2.7
RAB40B-201ENST00000269347 ADGRF5Q8IZF2 1346 aa31.88■■■□□ 2.69
RAB40B-201ENST00000269347 CAMSAP1Q5T5Y3 1602 aa31.87■■■□□ 2.69
RAB40B-201ENST00000269347 HNRNPUQ00839 825 aaKnown RBP eCLIP31.87■■■□□ 2.69
RAB40B-201ENST00000269347 WASHC2CQ9Y4E1 1318 aa31.86■■■□□ 2.69
RAB40B-201ENST00000269347 PELP1Q8IZL8 1130 aaKnown RBP31.85■■■□□ 2.69
RAB40B-201ENST00000269347 FAM9BQ8IZU0 186 aa31.85■■■□□ 2.69
RAB40B-201ENST00000269347 ADGRB3O60242 1522 aa31.83■■■□□ 2.69
RAB40B-201ENST00000269347 SUPT16HQ9Y5B9 1047 aaKnown RBP31.81■■■□□ 2.68
RAB40B-201ENST00000269347 CFAP70Q5T0N1 1121 aa31.81■■■□□ 2.68
RAB40B-201ENST00000269347 MYOM2P54296 1465 aa31.79■■■□□ 2.68
RAB40B-201ENST00000269347 SYNMO15061 1565 aa31.79■■■□□ 2.68
RAB40B-201ENST00000269347 KIAA1210Q9ULL0 1709 aa31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms