RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 HECW2Q9P2P5 1572 aa16.56■□□□□ 0.24
SCAF11-201ENST00000266589 EIF2AK4Q9P2K8 1649 aaKnown RBP16.56■□□□□ 0.24
SCAF11-201ENST00000266589 L3MBTL2Q969R5 705 aa16.55■□□□□ 0.24
SCAF11-201ENST00000266589 MLH3Q9UHC1 1453 aa16.53■□□□□ 0.24
SCAF11-201ENST00000266589 FAM69CQ0P6D2 419 aa16.53■□□□□ 0.24
SCAF11-201ENST00000266589 DHX29Q7Z478 1369 aaKnown RBP16.52■□□□□ 0.24
SCAF11-201ENST00000266589 RICTORQ6R327 1708 aa16.52■□□□□ 0.23
SCAF11-201ENST00000266589 TSPOAP1O95153 1857 aa16.51■□□□□ 0.23
SCAF11-201ENST00000266589 ABCA6Q8N139 1617 aa16.5■□□□□ 0.23
SCAF11-201ENST00000266589 PPRC1Q5VV67 1664 aaKnown RBP16.5■□□□□ 0.23
SCAF11-201ENST00000266589 A2MP01023 1474 aa16.49■□□□□ 0.23
SCAF11-201ENST00000266589 PRDM15P57071 1507 aaPredicted RBP16.49■□□□□ 0.23
SCAF11-201ENST00000266589 MROH1Q8NDA8 1641 aa16.48■□□□□ 0.23
SCAF11-201ENST00000266589 RAPGEF3O95398 923 aa16.48■□□□□ 0.23
SCAF11-201ENST00000266589 E9PCH4 1651 aa16.48■□□□□ 0.23
SCAF11-201ENST00000266589 VWDEQ8N2E2 1590 aa16.47■□□□□ 0.23
SCAF11-201ENST00000266589 KIF3BO15066 747 aa16.47■□□□□ 0.23
SCAF11-201ENST00000266589 KIF13AQ9H1H9 1805 aa16.47■□□□□ 0.23
SCAF11-201ENST00000266589 FRMPD1Q5SYB0 1578 aa16.47■□□□□ 0.23
SCAF11-201ENST00000266589 TET3O43151 1660 aa16.47■□□□□ 0.23
SCAF11-201ENST00000266589 CCDC144AA2RUR9 1427 aa16.47■□□□□ 0.23
SCAF11-201ENST00000266589 KANK1Q14678 1352 aa16.46■□□□□ 0.23
SCAF11-201ENST00000266589 PLA2R1Q13018 1463 aa16.46■□□□□ 0.23
SCAF11-201ENST00000266589 RNF17Q9BXT8 1623 aaKnown RBP16.45■□□□□ 0.22
SCAF11-201ENST00000266589 DIP2CQ9Y2E4 1556 aa16.44■□□□□ 0.22
SCAF11-201ENST00000266589 ATP10AO60312 1499 aa16.44■□□□□ 0.22
SCAF11-201ENST00000266589 BCORL1Q5H9F3 1711 aa16.44■□□□□ 0.22
SCAF11-201ENST00000266589 NBPF8Q3BBV2 869 aa16.43■□□□□ 0.22
SCAF11-201ENST00000266589 HIRIP3Q9BW71 556 aaPredicted RBP16.42■□□□□ 0.22
SCAF11-201ENST00000266589 SPHKAPQ2M3C7 1700 aa16.42■□□□□ 0.22
SCAF11-201ENST00000266589 CEP152O94986 1710 aa16.4■□□□□ 0.22
SCAF11-201ENST00000266589 ZMYM4Q5VZL5 1548 aa16.4■□□□□ 0.22
SCAF11-201ENST00000266589 TRPM2O94759 1503 aa16.39■□□□□ 0.21
SCAF11-201ENST00000266589 EFCAB6Q5THR3 1501 aa16.38■□□□□ 0.21
SCAF11-201ENST00000266589 UHRF1BP1Q6BDS2 1440 aa16.38■□□□□ 0.21
SCAF11-201ENST00000266589 YEATS2Q9ULM3 1422 aa16.38■□□□□ 0.21
SCAF11-201ENST00000266589 LMTK2Q8IWU2 1503 aa16.38■□□□□ 0.21
SCAF11-201ENST00000266589 ZNF326Q5BKZ1 582 aaKnown RBP16.37■□□□□ 0.21
SCAF11-201ENST00000266589 PTPRTO14522 1441 aa16.36■□□□□ 0.21
SCAF11-201ENST00000266589 HSPA5P11021 654 aaKnown RBP16.36■□□□□ 0.21
SCAF11-201ENST00000266589 MIER1Q8N108 512 aa16.36■□□□□ 0.21
SCAF11-201ENST00000266589 CLTCL1P53675 1640 aa16.35■□□□□ 0.21
SCAF11-201ENST00000266589 EIF4G2P78344 907 aaKnown RBP eCLIP16.35■□□□□ 0.211e-13■■■■■ 57.3
SCAF11-201ENST00000266589 DCAF11Q8TEB1 546 aa16.34■□□□□ 0.21
SCAF11-201ENST00000266589 GGT6Q6P531 493 aa16.34■□□□□ 0.21
SCAF11-201ENST00000266589 RALGAPBQ86X10 1494 aa16.33■□□□□ 0.21
SCAF11-201ENST00000266589 KDM2AQ9Y2K7 1162 aa16.33■□□□□ 0.21
SCAF11-201ENST00000266589 RGL3Q3MIN7 710 aa16.33■□□□□ 0.2
SCAF11-201ENST00000266589 ABCC3O15438 1527 aa16.32■□□□□ 0.2
SCAF11-201ENST00000266589 SPATA31E1Q6ZUB1 1445 aa16.31■□□□□ 0.2
SCAF11-201ENST00000266589 CAMSAP1Q5T5Y3 1602 aa16.31■□□□□ 0.2
SCAF11-201ENST00000266589 DDX10Q13206 875 aaKnown RBP16.3■□□□□ 0.2
SCAF11-201ENST00000266589 ZC3H13Q5T200 1668 aaKnown RBP16.3■□□□□ 0.2
SCAF11-201ENST00000266589 TRPM1Q7Z4N2 1603 aa16.29■□□□□ 0.2
SCAF11-201ENST00000266589 PRAG1Q86YV5 1406 aa16.29■□□□□ 0.2
SCAF11-201ENST00000266589 WASHC2CQ9Y4E1 1318 aa16.28■□□□□ 0.2
SCAF11-201ENST00000266589 COL17A1Q9UMD9 1497 aaPredicted RBP16.28■□□□□ 0.2
SCAF11-201ENST00000266589 UGGT1Q9NYU2 1555 aa16.28■□□□□ 0.2
SCAF11-201ENST00000266589 REREQ9P2R6 1566 aa16.28■□□□□ 0.2
SCAF11-201ENST00000266589 NPATQ14207 1427 aa16.27■□□□□ 0.2
SCAF11-201ENST00000266589 KIF1BO60333 1816 aa16.27■□□□□ 0.19
SCAF11-201ENST00000266589 USP47Q96K76 1375 aa16.26■□□□□ 0.19
SCAF11-201ENST00000266589 POLR1AO95602 1720 aaPredicted RBP16.26■□□□□ 0.19
SCAF11-201ENST00000266589 NEURL4Q96JN8 1562 aa16.26■□□□□ 0.19
SCAF11-201ENST00000266589 ARHGEF40Q8TER5 1519 aa16.25■□□□□ 0.19
SCAF11-201ENST00000266589 CFAP65Q6ZU64 1925 aaKnown RBP16.25■□□□□ 0.19
SCAF11-201ENST00000266589 CARD11Q9BXL7 1154 aa16.23■□□□□ 0.19
SCAF11-201ENST00000266589 ROCK2O75116 1388 aaKnown RBP16.23■□□□□ 0.19
SCAF11-201ENST00000266589 SIGLEC1Q9BZZ2 1709 aa16.23■□□□□ 0.19
SCAF11-201ENST00000266589 WASHC2AQ641Q2 1341 aa16.23■□□□□ 0.19
SCAF11-201ENST00000266589 AGLP35573 1532 aa16.23■□□□□ 0.19
SCAF11-201ENST00000266589 MROH2AA6NES4 1674 aa16.23■□□□□ 0.19
SCAF11-201ENST00000266589 MADDQ8WXG6 1647 aa16.22■□□□□ 0.19
SCAF11-201ENST00000266589 CNTLNQ9NXG0 1405 aa16.22■□□□□ 0.19
SCAF11-201ENST00000266589 LAMC1P11047 1609 aa16.21■□□□□ 0.19
SCAF11-201ENST00000266589 ARHGAP31Q2M1Z3 1444 aa16.2■□□□□ 0.18
SCAF11-201ENST00000266589 CCDC7Q96M83 1385 aa16.19■□□□□ 0.18
SCAF11-201ENST00000266589 C11orf95C9JLR9 678 aaPredicted RBP16.19■□□□□ 0.18
SCAF11-201ENST00000266589 IFT172Q9UG01 1749 aa16.19■□□□□ 0.18
SCAF11-201ENST00000266589 ADGRB3O60242 1522 aa16.19■□□□□ 0.18
SCAF11-201ENST00000266589 NOS1P29475 1434 aa16.19■□□□□ 0.18
SCAF11-201ENST00000266589 SYNMO15061 1565 aa16.18■□□□□ 0.18
SCAF11-201ENST00000266589 GPRASP1Q5JY77 1395 aa16.18■□□□□ 0.18
SCAF11-201ENST00000266589 PIK3C2BO00750 1634 aa16.17■□□□□ 0.18
SCAF11-201ENST00000266589 NBPF1Q3BBV0 1214 aa16.17■□□□□ 0.18
SCAF11-201ENST00000266589 STAC3Q96MF2 364 aa16.17■□□□□ 0.18
SCAF11-201ENST00000266589 PREX1Q8TCU6 1659 aa16.16■□□□□ 0.18
SCAF11-201ENST00000266589 KIF7Q2M1P5 1343 aa16.15■□□□□ 0.18
SCAF11-201ENST00000266589 MYOM2P54296 1465 aa16.15■□□□□ 0.18
SCAF11-201ENST00000266589 CLTCQ00610 1675 aaKnown RBP16.15■□□□□ 0.18
SCAF11-201ENST00000266589 ST20-MTHFSA0A0A6YYL1 179 aa16.13■□□□□ 0.17
SCAF11-201ENST00000266589 CHGAP10645 457 aaKnown RBP16.13■□□□□ 0.17
SCAF11-201ENST00000266589 PPLO60437 1756 aa16.13■□□□□ 0.17
SCAF11-201ENST00000266589 KIAA1210Q9ULL0 1709 aa16.13■□□□□ 0.17
SCAF11-201ENST00000266589 TRHP20396 242 aaPredicted RBP16.12■□□□□ 0.17
SCAF11-201ENST00000266589 PPP6R1Q9UPN7 881 aa16.12■□□□□ 0.17
SCAF11-201ENST00000266589 ANP32CO43423 234 aa16.11■□□□□ 0.17
SCAF11-201ENST00000266589 YTHDC1Q96MU7 727 aaKnown RBP16.1■□□□□ 0.17
SCAF11-201ENST00000266589 IQGAP1P46940 1657 aa16.1■□□□□ 0.17
SCAF11-201ENST00000266589 MLECQ14165 292 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms