RNA–Protein interactions for RNA: ENST00000265260.7

PCNP-201, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNP, Length 2,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-201ENST00000265260 PARD3Q8TEW0 1356 aa21.64■■□□□ 1.06
PCNP-201ENST00000265260 C8orf34Q49A92 452 aa21.64■■□□□ 1.05
PCNP-201ENST00000265260 CENPQQ7L2Z9 268 aaPredicted RBP21.64■■□□□ 1.05
PCNP-201ENST00000265260 EIF4G3O43432 1585 aaKnown RBP21.63■■□□□ 1.05
PCNP-201ENST00000265260 CDCA7LQ96GN5 454 aa21.63■■□□□ 1.05
PCNP-201ENST00000265260 PLIN1O60240 522 aa21.62■■□□□ 1.05
PCNP-201ENST00000265260 BLMP54132 1417 aaPredicted RBP21.61■■□□□ 1.05
PCNP-201ENST00000265260 PLEKHH2Q8IVE3 1493 aa21.61■■□□□ 1.05
PCNP-201ENST00000265260 GAPVD1Q14C86 1478 aa21.59■■□□□ 1.05
PCNP-201ENST00000265260 ARHGEF12Q9NZN5 1544 aa21.59■■□□□ 1.05
PCNP-201ENST00000265260 CDK13Q14004 1512 aaKnown RBP21.56■■□□□ 1.04
PCNP-201ENST00000265260 CARD11Q9BXL7 1154 aa21.55■■□□□ 1.04
PCNP-201ENST00000265260 FBLN2P98095 1184 aa21.55■■□□□ 1.04
PCNP-201ENST00000265260 ZNF326Q5BKZ1 582 aaKnown RBP21.55■■□□□ 1.04
PCNP-201ENST00000265260 PKNOX2Q96KN3 472 aa21.55■■□□□ 1.04
PCNP-201ENST00000265260 ST20-MTHFSA0A0A6YYL1 179 aa21.52■■□□□ 1.04
PCNP-201ENST00000265260 GLIPR1L2Q4G1C9 344 aa21.52■■□□□ 1.04
PCNP-201ENST00000265260 RRAGDQ9NQL2 400 aaPredicted RBP21.52■■□□□ 1.04
PCNP-201ENST00000265260 C20orf194Q5TEA3 1177 aa21.51■■□□□ 1.03
PCNP-201ENST00000265260 L1TD1Q5T7N2 865 aaKnown RBP21.51■■□□□ 1.03
PCNP-201ENST00000265260 ADGBQ8N7X0 1667 aa21.5■■□□□ 1.03
PCNP-201ENST00000265260 PER1O15534 1290 aaPredicted RBP21.49■■□□□ 1.03
PCNP-201ENST00000265260 ADGRL2O95490 1459 aa21.48■■□□□ 1.03
PCNP-201ENST00000265260 VIRMAQ69YN4 1812 aaKnown RBP21.47■■□□□ 1.03
PCNP-201ENST00000265260 PKD2Q13563 968 aa21.47■■□□□ 1.03
PCNP-201ENST00000265260 POGKQ9P215 609 aa21.45■■□□□ 1.02
PCNP-201ENST00000265260 ZNF644Q9H582 1327 aaPredicted RBP21.45■■□□□ 1.02
PCNP-201ENST00000265260 DNAJC5Q9H3Z4 198 aa21.45■■□□□ 1.02
PCNP-201ENST00000265260 USP19O94966 1318 aa21.43■■□□□ 1.02
PCNP-201ENST00000265260 KIAA0586Q9BVV6 1533 aa21.42■■□□□ 1.02
PCNP-201ENST00000265260 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.4■■□□□ 1.02
PCNP-201ENST00000265260 IQGAP2Q13576 1575 aa21.4■■□□□ 1.02
PCNP-201ENST00000265260 DUSP27Q5VZP5 1158 aa21.39■■□□□ 1.01
PCNP-201ENST00000265260 CROCC2H7BZ55 1655 aa21.38■■□□□ 1.01
PCNP-201ENST00000265260 CEP170Q5SW79 1584 aa21.37■■□□□ 1.01
PCNP-201ENST00000265260 CAMSAP2Q08AD1 1489 aa21.37■■□□□ 1.01
PCNP-201ENST00000265260 CLCN1P35523 988 aa21.37■■□□□ 1.01
PCNP-201ENST00000265260 BECN1Q14457 450 aa21.37■■□□□ 1.01
PCNP-201ENST00000265260 EIF3AQ14152 1382 aaKnown RBP21.36■■□□□ 1.01
PCNP-201ENST00000265260 OSCARQ8IYS5 282 aa21.36■■□□□ 1.01
PCNP-201ENST00000265260 RRP9O43818 475 aaKnown RBP21.35■■□□□ 1.01
PCNP-201ENST00000265260 CHMP7Q8WUX9 453 aaPredicted RBP21.35■■□□□ 1.01
PCNP-201ENST00000265260 KDM5DQ9BY66 1539 aa21.35■■□□□ 1.01
PCNP-201ENST00000265260 PBRM1Q86U86 1689 aa21.35■■□□□ 1.01
PCNP-201ENST00000265260 ZNF521Q96K83 1311 aa21.35■■□□□ 1.01
PCNP-201ENST00000265260 RGS3P49796 1198 aa21.35■■□□□ 1.01
PCNP-201ENST00000265260 ANTXR1Q9H6X2 564 aa21.34■■□□□ 1.01
PCNP-201ENST00000265260 FSD2A1L4K1 749 aa21.34■■□□□ 1.01
PCNP-201ENST00000265260 COL17A1Q9UMD9 1497 aaPredicted RBP21.34■■□□□ 1.01
PCNP-201ENST00000265260 ANKRD30AQ9BXX3 1397 aa21.33■■□□□ 1
PCNP-201ENST00000265260 TRPM1Q7Z4N2 1603 aa21.32■■□□□ 1
PCNP-201ENST00000265260 CLASP1Q7Z460 1538 aa21.32■■□□□ 1
PCNP-201ENST00000265260 CHD1O14646 1710 aa21.32■■□□□ 1
PCNP-201ENST00000265260 ZMYND15Q9H091 742 aa21.32■■□□□ 1
PCNP-201ENST00000265260 ANKRD50Q9ULJ7 1429 aa21.31■■□□□ 1
PCNP-201ENST00000265260 ITSN2Q9NZM3 1697 aa21.31■■□□□ 1
PCNP-201ENST00000265260 PLEKHH1Q9ULM0 1364 aa21.31■■□□□ 1
PCNP-201ENST00000265260 PNNQ9H307 717 aaKnown RBP21.31■■□□□ 1
PCNP-201ENST00000265260 NLRP1Q9C000 1473 aa21.3■■□□□ 1
PCNP-201ENST00000265260 XRCC6P12956 609 aaKnown RBP eCLIP21.3■■□□□ 1
PCNP-201ENST00000265260 LAMC1P11047 1609 aa21.29■■□□□ 1
PCNP-201ENST00000265260 GPRASP1Q5JY77 1395 aa21.29■■□□□ 1
PCNP-201ENST00000265260 HSP90AA2PQ14568 343 aaPredicted RBP21.29■■□□□ 1
PCNP-201ENST00000265260 ADAMTS8Q9UP79 889 aa21.29■■□□□ 1
PCNP-201ENST00000265260 KDM2AQ9Y2K7 1162 aa21.28■■□□□ 1
PCNP-201ENST00000265260 HSP90AA1P07900 732 aaKnown RBP21.28■■□□□ 1
PCNP-201ENST00000265260 GOLGA2Q08379 1002 aa21.28■■□□□ 1
PCNP-201ENST00000265260 CC2D1BQ5T0F9 858 aaKnown RBP21.28■■□□□ 1
PCNP-201ENST00000265260 VSIG10Q8N0Z9 540 aa21.28■■□□□ 1
PCNP-201ENST00000265260 NUP153P49790 1475 aaKnown RBP21.27■■□□□ 1
PCNP-201ENST00000265260 MAGI1Q96QZ7 1491 aaPredicted RBP21.27■■□□□ 1
PCNP-201ENST00000265260 TRMT2AQ8IZ69 625 aaKnown RBP21.27■■□□□ 1
PCNP-201ENST00000265260 NAP1L5Q96NT1 182 aaPredicted RBP21.27■■□□□ 1
PCNP-201ENST00000265260 PRAG1Q86YV5 1406 aa21.27■■□□□ 1
PCNP-201ENST00000265260 GOLGA6L3A6NEY3 463 aa21.27■□□□□ 0.99
PCNP-201ENST00000265260 MAPK8IP3Q9UPT6 1336 aa21.27■□□□□ 0.99
PCNP-201ENST00000265260 NUP155O75694 1391 aa21.26■□□□□ 0.99
PCNP-201ENST00000265260 PTPRGP23470 1445 aa21.26■□□□□ 0.99
PCNP-201ENST00000265260 SLFN5Q08AF3 891 aa21.25■□□□□ 0.99
PCNP-201ENST00000265260 GPATCH8Q9UKJ3 1502 aaKnown RBP21.25■□□□□ 0.99
PCNP-201ENST00000265260 SYNJ2O15056 1496 aa21.25■□□□□ 0.99
PCNP-201ENST00000265260 ARID3CA6NKF2 412 aa21.24■□□□□ 0.99
PCNP-201ENST00000265260 CFDP1Q9UEE9 299 aaPredicted RBP21.24■□□□□ 0.99
PCNP-201ENST00000265260 SEC24BO95487 1268 aa21.23■□□□□ 0.99
PCNP-201ENST00000265260 PANK3Q9H999 370 aa21.23■□□□□ 0.99
PCNP-201ENST00000265260 TROQ12816 1431 aaPredicted RBP21.23■□□□□ 0.99
PCNP-201ENST00000265260 SLKQ9H2G2 1235 aaPredicted RBP21.23■□□□□ 0.99
PCNP-201ENST00000265260 ZMYM3Q14202 1370 aa21.23■□□□□ 0.99
PCNP-201ENST00000265260 PRDM15P57071 1507 aaPredicted RBP21.22■□□□□ 0.99
PCNP-201ENST00000265260 TESK2Q96S53 571 aa21.22■□□□□ 0.99
PCNP-201ENST00000265260 ADAMTS12P58397 1594 aa21.22■□□□□ 0.99
PCNP-201ENST00000265260 DISP3Q9P2K9 1392 aa21.21■□□□□ 0.99
PCNP-201ENST00000265260 SHANK2Q9UPX8 1470 aa21.21■□□□□ 0.99
PCNP-201ENST00000265260 RAPGEF6Q8TEU7 1601 aa21.21■□□□□ 0.99
PCNP-201ENST00000265260 IGHDP01880 384 aa21.21■□□□□ 0.99
PCNP-201ENST00000265260 ADCY10Q96PN6 1610 aa21.2■□□□□ 0.98
PCNP-201ENST00000265260 NKTRP30414 1462 aaKnown RBP21.18■□□□□ 0.98
PCNP-201ENST00000265260 ERBINQ96RT1 1412 aa21.18■□□□□ 0.98
PCNP-201ENST00000265260 MCM4P33991 863 aa21.18■□□□□ 0.98
PCNP-201ENST00000265260 TBC1D32Q96NH3 1257 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms