RNA–Protein interactions for RNA: ENST00000264741.9

ITGA9-201, Transcript of integrin subunit alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA9, Length 7,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-201ENST00000264741 SLKQ9H2G2 1235 aaPredicted RBP20.4■□□□□ 0.86
ITGA9-201ENST00000264741 KAT6BQ8WYB5 2073 aa20.4■□□□□ 0.86
ITGA9-201ENST00000264741 DCAF11Q8TEB1 546 aa20.39■□□□□ 0.85
ITGA9-201ENST00000264741 NAP1L1P55209 391 aaKnown RBP20.39■□□□□ 0.85
ITGA9-201ENST00000264741 CSPP1Q1MSJ5 1256 aa20.38■□□□□ 0.85
ITGA9-201ENST00000264741 NGDNQ8NEJ9 315 aaKnown RBP20.38■□□□□ 0.85
ITGA9-201ENST00000264741 PPP4R2Q9NY27 417 aa20.38■□□□□ 0.85
ITGA9-201ENST00000264741 APPP05067 770 aa20.38■□□□□ 0.85
ITGA9-201ENST00000264741 TPM1P09493 284 aa20.38■□□□□ 0.85
ITGA9-201ENST00000264741 IPO8O15397 1037 aaKnown RBP20.37■□□□□ 0.85
ITGA9-201ENST00000264741 SLC4A3P48751 1232 aa20.37■□□□□ 0.85
ITGA9-201ENST00000264741 AMPHP49418 695 aa20.36■□□□□ 0.85
ITGA9-201ENST00000264741 ZNF592Q92610 1267 aa20.35■□□□□ 0.85
ITGA9-201ENST00000264741 KIF16BQ96L93 1317 aa20.35■□□□□ 0.85
ITGA9-201ENST00000264741 SKIDA1Q1XH10 827 aa20.34■□□□□ 0.85
ITGA9-201ENST00000264741 HSP90AB2PQ58FF8 381 aa20.34■□□□□ 0.85
ITGA9-201ENST00000264741 MCTP1Q6DN14 999 aa20.34■□□□□ 0.85
ITGA9-201ENST00000264741 U2AF1L5P0DN76 240 aaPredicted RBP20.34■□□□□ 0.85
ITGA9-201ENST00000264741 U2AF1Q01081 240 aaKnown RBP eCLIP20.34■□□□□ 0.85
ITGA9-201ENST00000264741 MFAP1P55081 439 aaKnown RBP20.33■□□□□ 0.85
ITGA9-201ENST00000264741 BCL11BQ9C0K0 894 aaPredicted RBP20.33■□□□□ 0.85
ITGA9-201ENST00000264741 WWC2Q6AWC2 1192 aa20.33■□□□□ 0.85
ITGA9-201ENST00000264741 NUTM2DQ5VT03 806 aaPredicted RBP20.33■□□□□ 0.84
ITGA9-201ENST00000264741 FAM184AQ8NB25 1140 aa20.33■□□□□ 0.84
ITGA9-201ENST00000264741 GOLGA6L19H0YKK7 550 aa20.32■□□□□ 0.84
ITGA9-201ENST00000264741 SYNE3Q6ZMZ3 975 aa20.32■□□□□ 0.84
ITGA9-201ENST00000264741 MAP7D2Q96T17 732 aa20.31■□□□□ 0.84
ITGA9-201ENST00000264741 IBSPP21815 317 aaPredicted RBP20.31■□□□□ 0.84
ITGA9-201ENST00000264741 MTMR7Q9Y216 660 aa20.3■□□□□ 0.84
ITGA9-201ENST00000264741 RSF1Q96T23 1441 aaPredicted RBP20.3■□□□□ 0.84
ITGA9-201ENST00000264741 FYB1O15117 783 aa20.29■□□□□ 0.84
ITGA9-201ENST00000264741 CALD1Q05682 793 aaKnown RBP20.29■□□□□ 0.84
ITGA9-201ENST00000264741 PLCD4Q9BRC7 762 aa20.29■□□□□ 0.84
ITGA9-201ENST00000264741 EID1Q9Y6B2 187 aa20.29■□□□□ 0.84
ITGA9-201ENST00000264741 RILPL2Q969X0 211 aa20.28■□□□□ 0.84
ITGA9-201ENST00000264741 EPS15P42566 896 aa20.28■□□□□ 0.84
ITGA9-201ENST00000264741 ZCCHC6Q5VYS8 1495 aaKnown RBP20.27■□□□□ 0.84
ITGA9-201ENST00000264741 IKQ13123 557 aaPredicted RBP20.27■□□□□ 0.84
ITGA9-201ENST00000264741 DEKP35659 375 aaKnown RBP20.26■□□□□ 0.83
ITGA9-201ENST00000264741 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.26■□□□□ 0.83
ITGA9-201ENST00000264741 PHF14O94880 888 aa20.26■□□□□ 0.83
ITGA9-201ENST00000264741 GPS2Q13227 327 aa20.26■□□□□ 0.83
ITGA9-201ENST00000264741 ZNF771Q7L3S4 317 aaPredicted RBP20.26■□□□□ 0.83
ITGA9-201ENST00000264741 RBM33Q96EV2 1170 aaKnown RBP20.25■□□□□ 0.83
ITGA9-201ENST00000264741 HOMER1Q86YM7 354 aa20.24■□□□□ 0.83
ITGA9-201ENST00000264741 RUFY1Q96T51 708 aa20.24■□□□□ 0.83
ITGA9-201ENST00000264741 IPO7O95373 1038 aaKnown RBP20.23■□□□□ 0.83
ITGA9-201ENST00000264741 C1orf141Q5JVX7 400 aa20.23■□□□□ 0.83
ITGA9-201ENST00000264741 TRIM29Q14134 588 aa20.23■□□□□ 0.83
ITGA9-201ENST00000264741 SMC4Q9NTJ3 1288 aa20.22■□□□□ 0.83
ITGA9-201ENST00000264741 FOSBP53539 338 aa20.22■□□□□ 0.83
ITGA9-201ENST00000264741 BECN2A8MW95 431 aa20.21■□□□□ 0.83
ITGA9-201ENST00000264741 KIF3AQ9Y496 699 aa20.21■□□□□ 0.83
ITGA9-201ENST00000264741 EIF4G1Q04637 1599 aaKnown RBP20.21■□□□□ 0.83
ITGA9-201ENST00000264741 CCDC47Q96A33 483 aaKnown RBP20.2■□□□□ 0.82
ITGA9-201ENST00000264741 HMMRO75330 724 aa20.2■□□□□ 0.82
ITGA9-201ENST00000264741 DHX37Q8IY37 1157 aaKnown RBP20.2■□□□□ 0.82
ITGA9-201ENST00000264741 ANKRD62A6NC57 917 aa20.18■□□□□ 0.82
ITGA9-201ENST00000264741 HDAC5Q9UQL6 1122 aa20.18■□□□□ 0.82
ITGA9-201ENST00000264741 NFXL1Q6ZNB6 911 aa20.18■□□□□ 0.82
ITGA9-201ENST00000264741 KDM4AO75164 1064 aa20.17■□□□□ 0.82
ITGA9-201ENST00000264741 NEFHP12036 1026 aa20.17■□□□□ 0.82
ITGA9-201ENST00000264741 CCDC27Q2M243 656 aa20.17■□□□□ 0.82
ITGA9-201ENST00000264741 GOLGA6L3A6NEY3 463 aa20.16■□□□□ 0.82
ITGA9-201ENST00000264741 ANKRD20A12PQ8NF67 263 aa20.16■□□□□ 0.82
ITGA9-201ENST00000264741 NECTIN2Q92692 538 aa20.16■□□□□ 0.82
ITGA9-201ENST00000264741 CHMP4AQ9BY43 222 aa20.16■□□□□ 0.82
ITGA9-201ENST00000264741 RWDD1Q9H446 243 aaPredicted RBP20.15■□□□□ 0.82
ITGA9-201ENST00000264741 TTC5Q8N0Z6 440 aa20.13■□□□□ 0.81
ITGA9-201ENST00000264741 ERICH2A1L162 156 aa20.13■□□□□ 0.81
ITGA9-201ENST00000264741 SF3B2Q13435 895 aaKnown RBP20.13■□□□□ 0.81
ITGA9-201ENST00000264741 CCDC180Q9P1Z9 1646 aa20.12■□□□□ 0.81
ITGA9-201ENST00000264741 EIF2S2P20042 333 aaKnown RBP20.12■□□□□ 0.81
ITGA9-201ENST00000264741 TTLL5Q6EMB2 1281 aa20.12■□□□□ 0.81
ITGA9-201ENST00000264741 CLUAP1Q96AJ1 413 aa20.12■□□□□ 0.81
ITGA9-201ENST00000264741 CCDC146Q8IYE0 955 aa20.12■□□□□ 0.81
ITGA9-201ENST00000264741 SPDYE4A6NLX3 237 aa20.11■□□□□ 0.81
ITGA9-201ENST00000264741 ST18O60284 1047 aa20.1■□□□□ 0.81
ITGA9-201ENST00000264741 PLIN1O60240 522 aa20.09■□□□□ 0.81
ITGA9-201ENST00000264741 TEX35Q5T0J7 233 aa20.08■□□□□ 0.8
ITGA9-201ENST00000264741 SIN3AQ96ST3 1273 aa20.08■□□□□ 0.8
ITGA9-201ENST00000264741 RDXP35241 583 aaKnown RBP20.07■□□□□ 0.8
ITGA9-201ENST00000264741 CCDC191Q8NCU4 936 aa20.07■□□□□ 0.8
ITGA9-201ENST00000264741 OFD1O75665 1012 aa20.07■□□□□ 0.8
ITGA9-201ENST00000264741 CDR1P51861 262 aa20.06■□□□□ 0.8
ITGA9-201ENST00000264741 ZRSR2Q15696 482 aaKnown RBP20.06■□□□□ 0.8
ITGA9-201ENST00000264741 C9orf78Q9NZ63 289 aaPredicted RBP20.06■□□□□ 0.8
ITGA9-201ENST00000264741 HOOK1Q9UJC3 728 aaKnown RBP20.06■□□□□ 0.8
ITGA9-201ENST00000264741 CPLX1O14810 134 aa20.06■□□□□ 0.8
ITGA9-201ENST00000264741 CPLX2Q6PUV4 134 aaKnown RBP20.05■□□□□ 0.8
ITGA9-201ENST00000264741 TRDNQ13061 729 aa20.05■□□□□ 0.8
ITGA9-201ENST00000264741 CCDC173Q0VFZ6 552 aa20.05■□□□□ 0.8
ITGA9-201ENST00000264741 LRRFIP1Q32MZ4 808 aaKnown RBP20.05■□□□□ 0.8
ITGA9-201ENST00000264741 FAM177BA6PVY3 158 aa20.04■□□□□ 0.8
ITGA9-201ENST00000264741 TCERG1O14776 1098 aaKnown RBP20.04■□□□□ 0.8
ITGA9-201ENST00000264741 PMFBP1Q8TBY8 1022 aa20.04■□□□□ 0.8
ITGA9-201ENST00000264741 CAGE1Q8TC20 777 aa20.04■□□□□ 0.8
ITGA9-201ENST00000264741 SEPT7Q16181 437 aaKnown RBP20.04■□□□□ 0.8
ITGA9-201ENST00000264741 ATP2B2Q01814 1243 aa20.03■□□□□ 0.8
ITGA9-201ENST00000264741 MYCNP04198 464 aaPredicted RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms