RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 MAGI2Q86UL8 1455 aa12.08□□□□□ -0.48
COPS4-201ENST00000264389 MAPK8IP2Q13387 824 aaPredicted RBP12.08□□□□□ -0.48
COPS4-201ENST00000264389 FAM135AQ9P2D6 1515 aa12.08□□□□□ -0.48
COPS4-201ENST00000264389 AFAP1Q8N556 730 aa12.07□□□□□ -0.48
COPS4-201ENST00000264389 ABCA6Q8N139 1617 aa12.07□□□□□ -0.48
COPS4-201ENST00000264389 TEX14Q8IWB6 1497 aa12.06□□□□□ -0.48
COPS4-201ENST00000264389 SIN3AQ96ST3 1273 aa12.06□□□□□ -0.48
COPS4-201ENST00000264389 SLC4A1APQ9BWU0 796 aaKnown RBP12.06□□□□□ -0.48
COPS4-201ENST00000264389 NUP155O75694 1391 aa12.06□□□□□ -0.48
COPS4-201ENST00000264389 NEUROD1Q13562 356 aa12.06□□□□□ -0.48
COPS4-201ENST00000264389 FRMPD1Q5SYB0 1578 aa12.05□□□□□ -0.48
COPS4-201ENST00000264389 TONSLQ96HA7 1378 aa12.04□□□□□ -0.48
COPS4-201ENST00000264389 FAM69CQ0P6D2 419 aa12.04□□□□□ -0.48
COPS4-201ENST00000264389 MYT1LQ9UL68 1186 aa12.04□□□□□ -0.48
COPS4-201ENST00000264389 MLH3Q9UHC1 1453 aa12.04□□□□□ -0.48
COPS4-201ENST00000264389 BCORL1Q5H9F3 1711 aa12.04□□□□□ -0.48
COPS4-201ENST00000264389 DIP2CQ9Y2E4 1556 aa12.03□□□□□ -0.48
COPS4-201ENST00000264389 RNF17Q9BXT8 1623 aaKnown RBP12.02□□□□□ -0.48
COPS4-201ENST00000264389 PRDM15P57071 1507 aaPredicted RBP12.02□□□□□ -0.49
COPS4-201ENST00000264389 ZMYM4Q5VZL5 1548 aa12.02□□□□□ -0.49
COPS4-201ENST00000264389 CNKSR2Q8WXI2 1034 aa12.02□□□□□ -0.49
COPS4-201ENST00000264389 TIMELESSQ9UNS1 1208 aa12.02□□□□□ -0.49
COPS4-201ENST00000264389 TET3O43151 1660 aa12.02□□□□□ -0.49
COPS4-201ENST00000264389 ANKRD30BQ9BXX2 1392 aa12.01□□□□□ -0.49
COPS4-201ENST00000264389 RPRD2Q5VT52 1461 aaKnown RBP12.01□□□□□ -0.49
COPS4-201ENST00000264389 NPM3O75607 178 aaKnown RBP12.01□□□□□ -0.49
COPS4-201ENST00000264389 MROH1Q8NDA8 1641 aa12.01□□□□□ -0.49
COPS4-201ENST00000264389 CEP152O94986 1710 aa12.01□□□□□ -0.49
COPS4-201ENST00000264389 E9PCH4 1651 aa12.01□□□□□ -0.49
COPS4-201ENST00000264389 A2MP01023 1474 aa12.01□□□□□ -0.49
COPS4-201ENST00000264389 SPHKAPQ2M3C7 1700 aa12□□□□□ -0.49
COPS4-201ENST00000264389 PKD2Q13563 968 aa11.99□□□□□ -0.49
COPS4-201ENST00000264389 VWDEQ8N2E2 1590 aa11.98□□□□□ -0.49
COPS4-201ENST00000264389 DHX29Q7Z478 1369 aaKnown RBP11.98□□□□□ -0.49
COPS4-201ENST00000264389 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.97□□□□□ -0.49
COPS4-201ENST00000264389 ZC3H13Q5T200 1668 aaKnown RBP11.96□□□□□ -0.5
COPS4-201ENST00000264389 KANK1Q14678 1352 aa11.95□□□□□ -0.5
COPS4-201ENST00000264389 RAPGEF3O95398 923 aa11.95□□□□□ -0.5
COPS4-201ENST00000264389 EFCAB6Q5THR3 1501 aa11.94□□□□□ -0.5
COPS4-201ENST00000264389 ZNF316A6NFI3 1004 aaPredicted RBP11.94□□□□□ -0.5
COPS4-201ENST00000264389 ARHGEF40Q8TER5 1519 aa11.93□□□□□ -0.5
COPS4-201ENST00000264389 KIF3BO15066 747 aa11.93□□□□□ -0.5
COPS4-201ENST00000264389 CAMSAP1Q5T5Y3 1602 aa11.93□□□□□ -0.5
COPS4-201ENST00000264389 REREQ9P2R6 1566 aa11.93□□□□□ -0.5
COPS4-201ENST00000264389 PPP1R15AO75807 674 aaPredicted RBP11.92□□□□□ -0.5
COPS4-201ENST00000264389 CCDC144AA2RUR9 1427 aa11.92□□□□□ -0.5
COPS4-201ENST00000264389 YEATS2Q9ULM3 1422 aa11.92□□□□□ -0.5
COPS4-201ENST00000264389 TRPM2O94759 1503 aa11.91□□□□□ -0.5
COPS4-201ENST00000264389 LMTK2Q8IWU2 1503 aa11.91□□□□□ -0.5
COPS4-201ENST00000264389 ATP10AO60312 1499 aa11.9□□□□□ -0.5
COPS4-201ENST00000264389 KIF1BO60333 1816 aa11.9□□□□□ -0.5
COPS4-201ENST00000264389 CFAP65Q6ZU64 1925 aaKnown RBP11.89□□□□□ -0.51
COPS4-201ENST00000264389 CLTCL1P53675 1640 aa11.89□□□□□ -0.51
COPS4-201ENST00000264389 ABCC3O15438 1527 aa11.88□□□□□ -0.51
COPS4-201ENST00000264389 L3MBTL2Q969R5 705 aa11.88□□□□□ -0.51
COPS4-201ENST00000264389 PLA2R1Q13018 1463 aa11.88□□□□□ -0.51
COPS4-201ENST00000264389 SIGLEC1Q9BZZ2 1709 aa11.87□□□□□ -0.51
COPS4-201ENST00000264389 AGLP35573 1532 aa11.85□□□□□ -0.51
COPS4-201ENST00000264389 COL17A1Q9UMD9 1497 aaPredicted RBP11.85□□□□□ -0.51
COPS4-201ENST00000264389 PTPRTO14522 1441 aa11.84□□□□□ -0.51
COPS4-201ENST00000264389 MROH2AA6NES4 1674 aa11.84□□□□□ -0.51
COPS4-201ENST00000264389 POLR1AO95602 1720 aaPredicted RBP11.84□□□□□ -0.51
COPS4-201ENST00000264389 GGT6Q6P531 493 aa11.83□□□□□ -0.52
COPS4-201ENST00000264389 CLTCQ00610 1675 aaKnown RBP11.83□□□□□ -0.52
COPS4-201ENST00000264389 NEURL4Q96JN8 1562 aa11.83□□□□□ -0.52
COPS4-201ENST00000264389 IFT172Q9UG01 1749 aa11.83□□□□□ -0.52
COPS4-201ENST00000264389 PREX1Q8TCU6 1659 aa11.83□□□□□ -0.52
COPS4-201ENST00000264389 TRPM1Q7Z4N2 1603 aa11.82□□□□□ -0.52
COPS4-201ENST00000264389 DNAJC5Q9H3Z4 198 aa11.82□□□□□ -0.52
COPS4-201ENST00000264389 UGGT1Q9NYU2 1555 aa11.82□□□□□ -0.52
COPS4-201ENST00000264389 NPATQ14207 1427 aa11.81□□□□□ -0.52
COPS4-201ENST00000264389 DIEXFQ68CQ4 756 aaKnown RBP11.81□□□□□ -0.52
COPS4-201ENST00000264389 UHRF1BP1Q6BDS2 1440 aa11.81□□□□□ -0.52
COPS4-201ENST00000264389 RALGAPBQ86X10 1494 aa11.81□□□□□ -0.52
COPS4-201ENST00000264389 TRHP20396 242 aaPredicted RBP11.8□□□□□ -0.52
COPS4-201ENST00000264389 PIK3C2BO00750 1634 aa11.8□□□□□ -0.52
COPS4-201ENST00000264389 WASHC2CQ9Y4E1 1318 aa11.79□□□□□ -0.52
COPS4-201ENST00000264389 CNTLNQ9NXG0 1405 aa11.79□□□□□ -0.52
COPS4-201ENST00000264389 MADDQ8WXG6 1647 aa11.79□□□□□ -0.52
COPS4-201ENST00000264389 SYNMO15061 1565 aa11.79□□□□□ -0.52
COPS4-201ENST00000264389 SPATA31E1Q6ZUB1 1445 aa11.78□□□□□ -0.52
COPS4-201ENST00000264389 NBPF8Q3BBV2 869 aa11.78□□□□□ -0.52
COPS4-201ENST00000264389 DMRT2Q9Y5R5 561 aa11.78□□□□□ -0.52
COPS4-201ENST00000264389 LAMC1P11047 1609 aa11.78□□□□□ -0.52
COPS4-201ENST00000264389 ADGRB3O60242 1522 aa11.78□□□□□ -0.52
COPS4-201ENST00000264389 ARHGAP31Q2M1Z3 1444 aa11.78□□□□□ -0.52
COPS4-201ENST00000264389 PPLO60437 1756 aa11.78□□□□□ -0.52
COPS4-201ENST00000264389 ZNF326Q5BKZ1 582 aaKnown RBP11.77□□□□□ -0.52
COPS4-201ENST00000264389 MYO5BQ9ULV0 1848 aa11.77□□□□□ -0.53
COPS4-201ENST00000264389 DCAF11Q8TEB1 546 aa11.77□□□□□ -0.53
COPS4-201ENST00000264389 PRAG1Q86YV5 1406 aa11.77□□□□□ -0.53
COPS4-201ENST00000264389 RGL3Q3MIN7 710 aa11.75□□□□□ -0.53
COPS4-201ENST00000264389 KIAA1210Q9ULL0 1709 aa11.75□□□□□ -0.53
COPS4-201ENST00000264389 NOS1P29475 1434 aa11.75□□□□□ -0.53
COPS4-201ENST00000264389 KDM2AQ9Y2K7 1162 aa11.74□□□□□ -0.53
COPS4-201ENST00000264389 FER1L4A9Z1Z3 1794 aa11.74□□□□□ -0.53
COPS4-201ENST00000264389 EIF4G2P78344 907 aaKnown RBP eCLIP11.74□□□□□ -0.53
COPS4-201ENST00000264389 MYOM2P54296 1465 aa11.73□□□□□ -0.53
COPS4-201ENST00000264389 RNF216Q9NWF9 866 aaPredicted RBP11.73□□□□□ -0.53
COPS4-201ENST00000264389 HIRIP3Q9BW71 556 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms