RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 ITGAEP38570 1179 aa28.26■■■□□ 2.11
COPE-201ENST00000262812 DUOX2Q9NRD8 1548 aa28.26■■■□□ 2.11
COPE-201ENST00000262812 FBXO31Q5XUX0 539 aaPredicted RBP28.24■■■□□ 2.11
COPE-201ENST00000262812 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.24■■■□□ 2.114e-6■■■□□ 15.1
COPE-201ENST00000262812 MROH2AA6NES4 1674 aa28.23■■■□□ 2.11
COPE-201ENST00000262812 CROCC2H7BZ55 1655 aa28.23■■■□□ 2.11
COPE-201ENST00000262812 NPATQ14207 1427 aa28.22■■■□□ 2.11
COPE-201ENST00000262812 PTPRKQ15262 1439 aa28.22■■■□□ 2.11
COPE-201ENST00000262812 NCOA1Q15788 1441 aa28.22■■■□□ 2.11
COPE-201ENST00000262812 PREX1Q8TCU6 1659 aa28.21■■■□□ 2.11
COPE-201ENST00000262812 KDM5DQ9BY66 1539 aa28.19■■■□□ 2.1
COPE-201ENST00000262812 ERBINQ96RT1 1412 aa28.18■■■□□ 2.1
COPE-201ENST00000262812 SETD1BQ9UPS6 1966 aaKnown RBP28.16■■■□□ 2.1
COPE-201ENST00000262812 EIF2AK4Q9P2K8 1649 aaKnown RBP28.14■■■□□ 2.1
COPE-201ENST00000262812 RNF17Q9BXT8 1623 aaKnown RBP28.13■■■□□ 2.09
COPE-201ENST00000262812 ADGRL2O95490 1459 aa28.13■■■□□ 2.09
COPE-201ENST00000262812 PZPP20742 1482 aa28.1■■■□□ 2.09
COPE-201ENST00000262812 ABCC3O15438 1527 aa28.1■■■□□ 2.09
COPE-201ENST00000262812 FAM135AQ9P2D6 1515 aa28.1■■■□□ 2.09
COPE-201ENST00000262812 TNRQ92752 1358 aa28.1■■■□□ 2.09
COPE-201ENST00000262812 MROH1Q8NDA8 1641 aa28.08■■■□□ 2.09
COPE-201ENST00000262812 KANK1Q14678 1352 aa28.08■■■□□ 2.09
COPE-201ENST00000262812 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.08■■■□□ 2.092e-7■■□□□ 12.9
COPE-201ENST00000262812 ANKRD50Q9ULJ7 1429 aa28.06■■■□□ 2.08
COPE-201ENST00000262812 DMRT2Q9Y5R5 561 aa28.04■■■□□ 2.08
COPE-201ENST00000262812 ROCK1Q13464 1354 aa28.02■■■□□ 2.08
COPE-201ENST00000262812 NCKAP5LQ9HCH0 1330 aa28.02■■■□□ 2.08
COPE-201ENST00000262812 RRBP1Q9P2E9 1410 aaKnown RBP28.01■■■□□ 2.08
COPE-201ENST00000262812 MYO3AQ8NEV4 1616 aa28■■■□□ 2.07
COPE-201ENST00000262812 PRDM15P57071 1507 aaPredicted RBP27.99■■■□□ 2.07
COPE-201ENST00000262812 ZC3H13Q5T200 1668 aaKnown RBP27.98■■■□□ 2.07
COPE-201ENST00000262812 CAMSAP1Q5T5Y3 1602 aa27.98■■■□□ 2.07
COPE-201ENST00000262812 CEP170BQ9Y4F5 1589 aaPredicted RBP27.98■■■□□ 2.07
COPE-201ENST00000262812 CEP152O94986 1710 aa27.98■■■□□ 2.07
COPE-201ENST00000262812 A2ML1A8K2U0 1454 aa27.97■■■□□ 2.07
COPE-201ENST00000262812 ERVK-7P63135 1459 aa27.95■■■□□ 2.06
COPE-201ENST00000262812 STRCQ7RTU9 1775 aa27.94■■■□□ 2.06
COPE-201ENST00000262812 DEPDC5O75140 1603 aa27.94■■■□□ 2.06
COPE-201ENST00000262812 ARHGAP31Q2M1Z3 1444 aa27.92■■■□□ 2.06
COPE-201ENST00000262812 THEMISQ8N1K5 641 aaPredicted RBP27.92■■■□□ 2.06
COPE-201ENST00000262812 PKD2Q13563 968 aa27.91■■■□□ 2.06
COPE-201ENST00000262812 NLRP1Q9C000 1473 aa27.9■■■□□ 2.06
COPE-201ENST00000262812 SPATA31D1Q6ZQQ2 1576 aa27.9■■■□□ 2.06
COPE-201ENST00000262812 ZNF142P52746 1687 aaPredicted RBP27.89■■■□□ 2.06
COPE-201ENST00000262812 PTPRTO14522 1441 aa27.88■■■□□ 2.05
COPE-201ENST00000262812 VWDEQ8N2E2 1590 aa27.88■■■□□ 2.05
COPE-201ENST00000262812 LMTK2Q8IWU2 1503 aa27.87■■■□□ 2.05
COPE-201ENST00000262812 PLA2R1Q13018 1463 aa27.85■■■□□ 2.05
COPE-201ENST00000262812 ILDR1Q86SU0 546 aaPredicted RBP27.85■■■□□ 2.05
COPE-201ENST00000262812 NUP155O75694 1391 aa27.85■■■□□ 2.05
COPE-201ENST00000262812 CFAP65Q6ZU64 1925 aaKnown RBP27.84■■■□□ 2.05
COPE-201ENST00000262812 ANKLE2Q86XL3 938 aa27.84■■■□□ 2.05
COPE-201ENST00000262812 UGGT1Q9NYU2 1555 aa27.84■■■□□ 2.05
COPE-201ENST00000262812 IDI1Q13907 227 aa27.81■■■□□ 2.04
COPE-201ENST00000262812 CERKQ8TCT0 537 aa27.81■■■□□ 2.04
COPE-201ENST00000262812 STAG3Q9UJ98 1225 aa27.81■■■□□ 2.04
COPE-201ENST00000262812 EFCAB6Q5THR3 1501 aa27.78■■■□□ 2.04
COPE-201ENST00000262812 NAIPQ13075 1403 aa27.76■■■□□ 2.04
COPE-201ENST00000262812 UNC13BO14795 1591 aa27.76■■■□□ 2.03
COPE-201ENST00000262812 NOS1P29475 1434 aa27.74■■■□□ 2.03
COPE-201ENST00000262812 TRIM52Q96A61 297 aa27.73■■■□□ 2.03
COPE-201ENST00000262812 ZNF335Q9H4Z2 1342 aaPredicted RBP27.72■■■□□ 2.03
COPE-201ENST00000262812 SLC52A1Q9NWF4 448 aa27.72■■■□□ 2.03
COPE-201ENST00000262812 TXNDC2Q86VQ3 553 aa27.71■■■□□ 2.03
COPE-201ENST00000262812 FBXO41Q8TF61 875 aa27.71■■■□□ 2.03
COPE-201ENST00000262812 RPRD2Q5VT52 1461 aaKnown RBP27.7■■■□□ 2.02
COPE-201ENST00000262812 TET3O43151 1660 aa27.69■■■□□ 2.02
COPE-201ENST00000262812 LTKP29376 864 aa27.69■■■□□ 2.02
COPE-201ENST00000262812 SYNMO15061 1565 aa27.69■■■□□ 2.02
COPE-201ENST00000262812 HFM1A2PYH4 1435 aa27.68■■■□□ 2.02
COPE-201ENST00000262812 CHGAP10645 457 aaKnown RBP27.67■■■□□ 2.02
COPE-201ENST00000262812 EID1Q9Y6B2 187 aa27.67■■■□□ 2.02
COPE-201ENST00000262812 NPHP4O75161 1426 aaPredicted RBP27.67■■■□□ 2.02
COPE-201ENST00000262812 IQGAP3Q86VI3 1631 aa27.66■■■□□ 2.02
COPE-201ENST00000262812 UBR1Q8IWV7 1749 aa27.65■■■□□ 2.02
COPE-201ENST00000262812 PIK3C2BO00750 1634 aa27.65■■■□□ 2.02
COPE-201ENST00000262812 NEURL4Q96JN8 1562 aa27.65■■■□□ 2.02
COPE-201ENST00000262812 TMEM2Q9UHN6 1383 aa27.63■■■□□ 2.01
COPE-201ENST00000262812 GCC2Q8IWJ2 1684 aa27.61■■■□□ 2.01
COPE-201ENST00000262812 LTBP4Q8N2S1 1624 aa27.6■■■□□ 2.01
COPE-201ENST00000262812 E9PCH4 1651 aa27.6■■■□□ 2.01
COPE-201ENST00000262812 MED14O60244 1454 aa27.6■■■□□ 2.01
COPE-201ENST00000262812 SCAF11Q99590 1463 aaKnown RBP27.59■■■□□ 2.01
COPE-201ENST00000262812 POLR1AO95602 1720 aaPredicted RBP27.59■■■□□ 2.01
COPE-201ENST00000262812 ARHGAP23Q9P227 1491 aa27.58■■■□□ 2.01
COPE-201ENST00000262812 SENP3Q9H4L4 574 aaPredicted RBP27.58■■■□□ 2.01
COPE-201ENST00000262812 SLIT1O75093 1534 aa27.57■■■□□ 2
COPE-201ENST00000262812 SLC4A1APQ9BWU0 796 aaKnown RBP27.57■■■□□ 2
COPE-201ENST00000262812 BCANQ96GW7 911 aa27.55■■■□□ 2
COPE-201ENST00000262812 ADGRB3O60242 1522 aa27.53■■■□□ 2
COPE-201ENST00000262812 NUTM2DQ5VT03 806 aaPredicted RBP27.51■■□□□ 1.99
COPE-201ENST00000262812 IQGAP1P46940 1657 aa27.5■■□□□ 1.99
COPE-201ENST00000262812 PPP1R15AO75807 674 aaPredicted RBP27.5■■□□□ 1.99
COPE-201ENST00000262812 HDGFP51858 240 aaKnown RBP27.5■■□□□ 1.99
COPE-201ENST00000262812 SLC26A8Q96RN1 970 aa27.49■■□□□ 1.99
COPE-201ENST00000262812 FOXD1Q16676 465 aa27.48■■□□□ 1.99
COPE-201ENST00000262812 RIMS2Q9UQ26 1411 aa27.47■■□□□ 1.99
COPE-201ENST00000262812 KDM5AP29375 1690 aaKnown RBP27.46■■□□□ 1.99
COPE-201ENST00000262812 SETD5Q9C0A6 1442 aa27.46■■□□□ 1.99
COPE-201ENST00000262812 TMEM131LA2VDJ0 1609 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms