RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 GCC2Q8IWJ2 1684 aa23.17■■□□□ 1.3
GYPC-201ENST00000259254 DUOX2Q9NRD8 1548 aa23.17■■□□□ 1.3
GYPC-201ENST00000259254 A2MP01023 1474 aa23.13■■□□□ 1.29
GYPC-201ENST00000259254 DHX29Q7Z478 1369 aaKnown RBP23.13■■□□□ 1.29
GYPC-201ENST00000259254 HRCP23327 699 aa23.12■■□□□ 1.29
GYPC-201ENST00000259254 PLPPR3Q6T4P5 718 aa23.12■■□□□ 1.29
GYPC-201ENST00000259254 TRIM52Q96A61 297 aa23.12■■□□□ 1.29
GYPC-201ENST00000259254 ERBINQ96RT1 1412 aa23.12■■□□□ 1.29
GYPC-201ENST00000259254 C3P01024 1663 aa23.09■■□□□ 1.29
GYPC-201ENST00000259254 PREX1Q8TCU6 1659 aa23.09■■□□□ 1.29
GYPC-201ENST00000259254 ACIN1Q9UKV3 1341 aaKnown RBP23.07■■□□□ 1.28
GYPC-201ENST00000259254 KIF3BO15066 747 aa23.06■■□□□ 1.28
GYPC-201ENST00000259254 MROH2AA6NES4 1674 aa23.04■■□□□ 1.28
GYPC-201ENST00000259254 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.04■■□□□ 1.28
GYPC-201ENST00000259254 CEBPAP49715 358 aaPredicted RBP23.03■■□□□ 1.28
GYPC-201ENST00000259254 CNTLNQ9NXG0 1405 aa23.02■■□□□ 1.28
GYPC-201ENST00000259254 SETD1BQ9UPS6 1966 aaKnown RBP23.02■■□□□ 1.28
GYPC-201ENST00000259254 NUP155O75694 1391 aa23.01■■□□□ 1.27
GYPC-201ENST00000259254 CCER1Q8TC90 406 aaPredicted RBP23■■□□□ 1.27
GYPC-201ENST00000259254 ESF1Q9H501 851 aaKnown RBP22.99■■□□□ 1.27
GYPC-201ENST00000259254 EIF2AK4Q9P2K8 1649 aaKnown RBP22.98■■□□□ 1.27
GYPC-201ENST00000259254 CLTCQ00610 1675 aaKnown RBP22.98■■□□□ 1.27
GYPC-201ENST00000259254 HSPA2P54652 639 aa22.98■■□□□ 1.27
GYPC-201ENST00000259254 GGT6Q6P531 493 aa22.97■■□□□ 1.27
GYPC-201ENST00000259254 KANK1Q14678 1352 aa22.96■■□□□ 1.27
GYPC-201ENST00000259254 DHX57Q6P158 1386 aaKnown RBP22.96■■□□□ 1.27
GYPC-201ENST00000259254 UHRF1BP1Q6BDS2 1440 aa22.95■■□□□ 1.26
GYPC-201ENST00000259254 SLC4A1APQ9BWU0 796 aaKnown RBP22.95■■□□□ 1.26
GYPC-201ENST00000259254 UNC13BO14795 1591 aa22.93■■□□□ 1.26
GYPC-201ENST00000259254 MPHOSPH9Q99550 1183 aa22.93■■□□□ 1.26
GYPC-201ENST00000259254 PZPP20742 1482 aa22.91■■□□□ 1.26
GYPC-201ENST00000259254 KDM5DQ9BY66 1539 aa22.9■■□□□ 1.26
GYPC-201ENST00000259254 ZMYM3Q14202 1370 aa22.89■■□□□ 1.25
GYPC-201ENST00000259254 DEPDC5O75140 1603 aa22.88■■□□□ 1.25
GYPC-201ENST00000259254 RNF17Q9BXT8 1623 aaKnown RBP22.88■■□□□ 1.25
GYPC-201ENST00000259254 NPATQ14207 1427 aa22.88■■□□□ 1.25
GYPC-201ENST00000259254 PRDM15P57071 1507 aaPredicted RBP22.87■■□□□ 1.25
GYPC-201ENST00000259254 FAM135AQ9P2D6 1515 aa22.87■■□□□ 1.25
GYPC-201ENST00000259254 STRCQ7RTU9 1775 aa22.86■■□□□ 1.25
GYPC-201ENST00000259254 WASHC2CQ9Y4E1 1318 aa22.86■■□□□ 1.25
GYPC-201ENST00000259254 PKD2Q13563 968 aa22.86■■□□□ 1.25
GYPC-201ENST00000259254 PPP6R1Q9UPN7 881 aa22.86■■□□□ 1.25
GYPC-201ENST00000259254 MROH1Q8NDA8 1641 aa22.86■■□□□ 1.25
GYPC-201ENST00000259254 IQGAP3Q86VI3 1631 aa22.83■■□□□ 1.25
GYPC-201ENST00000259254 FOXD1Q16676 465 aa22.83■■□□□ 1.25
GYPC-201ENST00000259254 ILDR1Q86SU0 546 aaPredicted RBP22.83■■□□□ 1.25
GYPC-201ENST00000259254 MYO3AQ8NEV4 1616 aa22.82■■□□□ 1.24
GYPC-201ENST00000259254 ZNF142P52746 1687 aaPredicted RBP22.81■■□□□ 1.24
GYPC-201ENST00000259254 VWDEQ8N2E2 1590 aa22.81■■□□□ 1.24
GYPC-201ENST00000259254 ABCC3O15438 1527 aa22.78■■□□□ 1.24
GYPC-201ENST00000259254 LMTK2Q8IWU2 1503 aa22.77■■□□□ 1.24
GYPC-201ENST00000259254 CLSPNQ9HAW4 1339 aa22.77■■□□□ 1.24
GYPC-201ENST00000259254 CEP170BQ9Y4F5 1589 aaPredicted RBP22.75■■□□□ 1.23
GYPC-201ENST00000259254 ZC3H13Q5T200 1668 aaKnown RBP22.74■■□□□ 1.23
GYPC-201ENST00000259254 TET3O43151 1660 aa22.74■■□□□ 1.23
GYPC-201ENST00000259254 CAMSAP1Q5T5Y3 1602 aa22.73■■□□□ 1.23
GYPC-201ENST00000259254 EFCAB6Q5THR3 1501 aa22.72■■□□□ 1.23
GYPC-201ENST00000259254 CEP152O94986 1710 aa22.72■■□□□ 1.23
GYPC-201ENST00000259254 DMRT2Q9Y5R5 561 aa22.71■■□□□ 1.23
GYPC-201ENST00000259254 PTPRTO14522 1441 aa22.69■■□□□ 1.22
GYPC-201ENST00000259254 ANKRD30BQ9BXX2 1392 aa22.69■■□□□ 1.22
GYPC-201ENST00000259254 NEUROD1Q13562 356 aa22.69■■□□□ 1.22
GYPC-201ENST00000259254 SIN3AQ96ST3 1273 aa22.68■■□□□ 1.22
GYPC-201ENST00000259254 FBXO41Q8TF61 875 aa22.67■■□□□ 1.22
GYPC-201ENST00000259254 A2ML1A8K2U0 1454 aa22.66■■□□□ 1.22
GYPC-201ENST00000259254 PLA2R1Q13018 1463 aa22.66■■□□□ 1.22
GYPC-201ENST00000259254 RPRD2Q5VT52 1461 aaKnown RBP22.66■■□□□ 1.22
GYPC-201ENST00000259254 ARHGAP31Q2M1Z3 1444 aa22.65■■□□□ 1.22
GYPC-201ENST00000259254 E9PCH4 1651 aa22.65■■□□□ 1.22
GYPC-201ENST00000259254 TNRQ92752 1358 aa22.64■■□□□ 1.22
GYPC-201ENST00000259254 FBXO31Q5XUX0 539 aaPredicted RBP22.63■■□□□ 1.21
GYPC-201ENST00000259254 CCDC144AA2RUR9 1427 aa22.62■■□□□ 1.21
GYPC-201ENST00000259254 SPATA31D1Q6ZQQ2 1576 aa22.6■■□□□ 1.21
GYPC-201ENST00000259254 ZEB1P37275 1124 aaPredicted RBP22.6■■□□□ 1.21
GYPC-201ENST00000259254 CERKQ8TCT0 537 aa22.59■■□□□ 1.21
GYPC-201ENST00000259254 POLR1AO95602 1720 aaPredicted RBP22.59■■□□□ 1.21
GYPC-201ENST00000259254 TRPM2O94759 1503 aa22.58■■□□□ 1.21
GYPC-201ENST00000259254 NLRP1Q9C000 1473 aa22.57■■□□□ 1.2
GYPC-201ENST00000259254 ERVK-7P63135 1459 aa22.56■■□□□ 1.2
GYPC-201ENST00000259254 CFAP65Q6ZU64 1925 aaKnown RBP22.56■■□□□ 1.2
GYPC-201ENST00000259254 NOS1P29475 1434 aa22.56■■□□□ 1.2
GYPC-201ENST00000259254 NCKAP5LQ9HCH0 1330 aa22.56■■□□□ 1.2
GYPC-201ENST00000259254 TONSLQ96HA7 1378 aa22.55■■□□□ 1.2
GYPC-201ENST00000259254 LTBP4Q8N2S1 1624 aa22.54■■□□□ 1.2
GYPC-201ENST00000259254 SPHKAPQ2M3C7 1700 aa22.54■■□□□ 1.2
GYPC-201ENST00000259254 UGGT1Q9NYU2 1555 aa22.52■■□□□ 1.2
GYPC-201ENST00000259254 CHGAP10645 457 aaKnown RBP22.51■■□□□ 1.19
GYPC-201ENST00000259254 NEURL4Q96JN8 1562 aa22.5■■□□□ 1.19
GYPC-201ENST00000259254 SLC52A1Q9NWF4 448 aa22.49■■□□□ 1.19
GYPC-201ENST00000259254 SYNMO15061 1565 aa22.49■■□□□ 1.19
GYPC-201ENST00000259254 CLTCL1P53675 1640 aa22.49■■□□□ 1.19
GYPC-201ENST00000259254 TIMELESSQ9UNS1 1208 aa22.48■■□□□ 1.19
GYPC-201ENST00000259254 RGL3Q3MIN7 710 aa22.47■■□□□ 1.19
GYPC-201ENST00000259254 UBR1Q8IWV7 1749 aa22.47■■□□□ 1.19
GYPC-201ENST00000259254 IDI1Q13907 227 aa22.46■■□□□ 1.19
GYPC-201ENST00000259254 THEMISQ8N1K5 641 aaPredicted RBP22.45■■□□□ 1.18
GYPC-201ENST00000259254 IQSEC2Q5JU85 1478 aa22.44■■□□□ 1.18
GYPC-201ENST00000259254 L3MBTL2Q969R5 705 aa22.44■■□□□ 1.18
GYPC-201ENST00000259254 STAG3Q9UJ98 1225 aa22.44■■□□□ 1.18
GYPC-201ENST00000259254 ZNF326Q5BKZ1 582 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms