RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 UNC13BO14795 1591 aa22.78■■□□□ 1.24
UBQLN1-201ENST00000257468 PLEKHH2Q8IVE3 1493 aa22.77■■□□□ 1.24
UBQLN1-201ENST00000257468 PLXNC1O60486 1568 aa22.75■■□□□ 1.23
UBQLN1-201ENST00000257468 CCDC144AA2RUR9 1427 aa22.74■■□□□ 1.23
UBQLN1-201ENST00000257468 ST20-MTHFSA0A0A6YYL1 179 aa22.73■■□□□ 1.23
UBQLN1-201ENST00000257468 PLA2R1Q13018 1463 aa22.73■■□□□ 1.23
UBQLN1-201ENST00000257468 IRX6P78412 446 aaPredicted RBP22.73■■□□□ 1.23
UBQLN1-201ENST00000257468 RGL3Q3MIN7 710 aa22.73■■□□□ 1.23
UBQLN1-201ENST00000257468 PLCH2O75038 1416 aa22.72■■□□□ 1.23
UBQLN1-201ENST00000257468 ROCK2O75116 1388 aaKnown RBP22.7■■□□□ 1.22
UBQLN1-201ENST00000257468 IQGAP3Q86VI3 1631 aa22.69■■□□□ 1.22
UBQLN1-201ENST00000257468 DUOX2Q9NRD8 1548 aa22.68■■□□□ 1.22
UBQLN1-201ENST00000257468 ARID4BQ4LE39 1312 aaPredicted RBP22.67■■□□□ 1.22
UBQLN1-201ENST00000257468 TRAPPC8Q9Y2L5 1435 aa22.67■■□□□ 1.22
UBQLN1-201ENST00000257468 ABCC1P33527 1531 aa22.67■■□□□ 1.22
UBQLN1-201ENST00000257468 PRAG1Q86YV5 1406 aa22.67■■□□□ 1.22
UBQLN1-201ENST00000257468 TRPM1Q7Z4N2 1603 aa22.66■■□□□ 1.22
UBQLN1-201ENST00000257468 EFCAB2Q5VUJ9 269 aa22.66■■□□□ 1.22
UBQLN1-201ENST00000257468 A2MP01023 1474 aa22.65■■□□□ 1.22
UBQLN1-201ENST00000257468 NBPF1Q3BBV0 1214 aa22.64■■□□□ 1.22
UBQLN1-201ENST00000257468 ZBED9Q6R2W3 1325 aa22.64■■□□□ 1.21
UBQLN1-201ENST00000257468 MAGI2Q86UL8 1455 aa22.62■■□□□ 1.21
UBQLN1-201ENST00000257468 ERBINQ96RT1 1412 aa22.62■■□□□ 1.21
UBQLN1-201ENST00000257468 OSCARQ8IYS5 282 aa22.59■■□□□ 1.21
UBQLN1-201ENST00000257468 AFAP1Q8N556 730 aa22.59■■□□□ 1.21
UBQLN1-201ENST00000257468 SENP3-EIF4A1A0A087X0R7 540 aa22.59■■□□□ 1.21
UBQLN1-201ENST00000257468 E9PCH4 1651 aa22.57■■□□□ 1.2
UBQLN1-201ENST00000257468 ARAP3Q8WWN8 1544 aa22.55■■□□□ 1.2
UBQLN1-201ENST00000257468 SPAG9O60271 1321 aaKnown RBP22.55■■□□□ 1.2
UBQLN1-201ENST00000257468 ZFYVE16Q7Z3T8 1539 aa22.53■■□□□ 1.2
UBQLN1-201ENST00000257468 ATP10AO60312 1499 aa22.52■■□□□ 1.2
UBQLN1-201ENST00000257468 GPRASP1Q5JY77 1395 aa22.51■■□□□ 1.19
UBQLN1-201ENST00000257468 WDR7Q9Y4E6 1490 aa22.51■■□□□ 1.19
UBQLN1-201ENST00000257468 PRDM15P57071 1507 aaPredicted RBP22.5■■□□□ 1.19
UBQLN1-201ENST00000257468 TMC1Q8TDI8 760 aa22.5■■□□□ 1.19
UBQLN1-201ENST00000257468 PNISRQ8TF01 805 aaKnown RBP22.5■■□□□ 1.19
UBQLN1-201ENST00000257468 DISP3Q9P2K9 1392 aa22.48■■□□□ 1.19
UBQLN1-201ENST00000257468 LAMC1P11047 1609 aa22.47■■□□□ 1.19
UBQLN1-201ENST00000257468 EIF2AK4Q9P2K8 1649 aaKnown RBP22.47■■□□□ 1.19
UBQLN1-201ENST00000257468 FANCAO15360 1455 aa22.46■■□□□ 1.19
UBQLN1-201ENST00000257468 ABCA9Q8IUA7 1624 aa22.46■■□□□ 1.19
UBQLN1-201ENST00000257468 TESK2Q96S53 571 aa22.46■■□□□ 1.19
UBQLN1-201ENST00000257468 RTEL1-TNFRSF6BF6WH68 1400 aa22.45■■□□□ 1.19
UBQLN1-201ENST00000257468 MYBBP1AQ9BQG0 1328 aaKnown RBP22.45■■□□□ 1.18
UBQLN1-201ENST00000257468 COL17A1Q9UMD9 1497 aaPredicted RBP22.45■■□□□ 1.18
UBQLN1-201ENST00000257468 ATP7AQ04656 1500 aa22.43■■□□□ 1.18
UBQLN1-201ENST00000257468 RALBP1Q15311 655 aa22.42■■□□□ 1.18
UBQLN1-201ENST00000257468 MYT1LQ9UL68 1186 aa22.42■■□□□ 1.18
UBQLN1-201ENST00000257468 INO80Q9ULG1 1556 aaPredicted RBP22.42■■□□□ 1.18
UBQLN1-201ENST00000257468 SMG6Q86US8 1419 aaKnown RBP22.41■■□□□ 1.18
UBQLN1-201ENST00000257468 RNF17Q9BXT8 1623 aaKnown RBP22.41■■□□□ 1.18
UBQLN1-201ENST00000257468 DEPDC5O75140 1603 aa22.41■■□□□ 1.18
UBQLN1-201ENST00000257468 BRD4O60885 1362 aaPredicted RBP22.4■■□□□ 1.18
UBQLN1-201ENST00000257468 TRPM2O94759 1503 aa22.4■■□□□ 1.18
UBQLN1-201ENST00000257468 SPHKAPQ2M3C7 1700 aa22.4■■□□□ 1.18
UBQLN1-201ENST00000257468 RBM19Q9Y4C8 960 aaKnown RBP22.4■■□□□ 1.18
UBQLN1-201ENST00000257468 CLTCL1P53675 1640 aa22.4■■□□□ 1.18
UBQLN1-201ENST00000257468 SCAPERQ9BY12 1400 aa22.39■■□□□ 1.18
UBQLN1-201ENST00000257468 ADGRL1O94910 1474 aa22.39■■□□□ 1.18
UBQLN1-201ENST00000257468 MADDQ8WXG6 1647 aa22.39■■□□□ 1.17
UBQLN1-201ENST00000257468 PER1O15534 1290 aaPredicted RBP22.39■■□□□ 1.17
UBQLN1-201ENST00000257468 PPP4R2Q9NY27 417 aa22.39■■□□□ 1.17
UBQLN1-201ENST00000257468 LRPPRCP42704 1394 aaKnown RBP22.39■■□□□ 1.17
UBQLN1-201ENST00000257468 ASXL2Q76L83 1435 aa22.38■■□□□ 1.17
UBQLN1-201ENST00000257468 KTN1Q86UP2 1357 aaKnown RBP22.38■■□□□ 1.17
UBQLN1-201ENST00000257468 NUDCQ9Y266 331 aa22.38■■□□□ 1.17
UBQLN1-201ENST00000257468 PARD3Q8TEW0 1356 aa22.38■■□□□ 1.17
UBQLN1-201ENST00000257468 CEP152O94986 1710 aa22.37■■□□□ 1.17
UBQLN1-201ENST00000257468 KIF3BO15066 747 aa22.37■■□□□ 1.17
UBQLN1-201ENST00000257468 ERICH6BQ5W0A0 696 aa22.37■■□□□ 1.17
UBQLN1-201ENST00000257468 TET3O43151 1660 aa22.36■■□□□ 1.17
UBQLN1-201ENST00000257468 CC2D1BQ5T0F9 858 aaKnown RBP22.35■■□□□ 1.17
UBQLN1-201ENST00000257468 B4GALNT3Q6L9W6 998 aa22.35■■□□□ 1.17
UBQLN1-201ENST00000257468 PTPRTO14522 1441 aa22.35■■□□□ 1.17
UBQLN1-201ENST00000257468 PANK3Q9H999 370 aa22.34■■□□□ 1.17
UBQLN1-201ENST00000257468 TMF1P82094 1093 aa22.33■■□□□ 1.17
UBQLN1-201ENST00000257468 NLRP13Q86W25 1043 aa22.32■■□□□ 1.16
UBQLN1-201ENST00000257468 VWDEQ8N2E2 1590 aa22.32■■□□□ 1.16
UBQLN1-201ENST00000257468 MROH1Q8NDA8 1641 aa22.31■■□□□ 1.16
UBQLN1-201ENST00000257468 IQGAP1P46940 1657 aa22.31■■□□□ 1.16
UBQLN1-201ENST00000257468 KANK1Q14678 1352 aa22.31■■□□□ 1.16
UBQLN1-201ENST00000257468 UGGT1Q9NYU2 1555 aa22.3■■□□□ 1.16
UBQLN1-201ENST00000257468 SALL2Q9Y467 1007 aaPredicted RBP22.29■■□□□ 1.16
UBQLN1-201ENST00000257468 KIDINS220Q9ULH0 1771 aa22.27■■□□□ 1.16
UBQLN1-201ENST00000257468 NPM1P06748 294 aaKnown RBP eCLIP22.24■■□□□ 1.15
UBQLN1-201ENST00000257468 RNF123Q5XPI4 1314 aa22.24■■□□□ 1.15
UBQLN1-201ENST00000257468 SCAF11Q99590 1463 aaKnown RBP22.23■■□□□ 1.15
UBQLN1-201ENST00000257468 MYT1Q01538 1121 aa22.22■■□□□ 1.15
UBQLN1-201ENST00000257468 WASHC2CQ9Y4E1 1318 aa22.21■■□□□ 1.15
UBQLN1-201ENST00000257468 CFAP74Q9C0B2 1584 aa22.21■■□□□ 1.15
UBQLN1-201ENST00000257468 PPRC1Q5VV67 1664 aaKnown RBP22.2■■□□□ 1.15
UBQLN1-201ENST00000257468 EFCAB6Q5THR3 1501 aa22.2■■□□□ 1.14
UBQLN1-201ENST00000257468 ZNF518AQ6AHZ1 1483 aa22.19■■□□□ 1.14
UBQLN1-201ENST00000257468 MROH2AA6NES4 1674 aa22.18■■□□□ 1.14
UBQLN1-201ENST00000257468 CFAP70Q5T0N1 1121 aa22.18■■□□□ 1.14
UBQLN1-201ENST00000257468 ADGRF5Q8IZF2 1346 aa22.17■■□□□ 1.14
UBQLN1-201ENST00000257468 ABCA6Q8N139 1617 aa22.16■■□□□ 1.14
UBQLN1-201ENST00000257468 MAP3K4Q9Y6R4 1608 aa22.15■■□□□ 1.14
UBQLN1-201ENST00000257468 KIF1BO60333 1816 aa22.15■■□□□ 1.14
UBQLN1-201ENST00000257468 CD109Q6YHK3 1445 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms