RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 PTPRKQ15262 1439 aa27.51■■□□□ 1.99
SNRPA1-201ENST00000254193 ITGAEP38570 1179 aa27.51■■□□□ 1.99
SNRPA1-201ENST00000254193 C3P01024 1663 aa27.48■■□□□ 1.99
SNRPA1-201ENST00000254193 ERBINQ96RT1 1412 aa27.47■■□□□ 1.99
SNRPA1-201ENST00000254193 CLTCQ00610 1675 aaKnown RBP27.46■■□□□ 1.99
SNRPA1-201ENST00000254193 ADGRL2O95490 1459 aa27.46■■□□□ 1.99
SNRPA1-201ENST00000254193 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.46■■□□□ 1.99
SNRPA1-201ENST00000254193 NPATQ14207 1427 aa27.44■■□□□ 1.98
SNRPA1-201ENST00000254193 UHRF1BP1Q6BDS2 1440 aa27.44■■□□□ 1.98
SNRPA1-201ENST00000254193 KDM5DQ9BY66 1539 aa27.44■■□□□ 1.98
SNRPA1-201ENST00000254193 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.43■■□□□ 1.982e-7■□□□□ 8
SNRPA1-201ENST00000254193 MROH2AA6NES4 1674 aa27.43■■□□□ 1.98
SNRPA1-201ENST00000254193 FBXO31Q5XUX0 539 aaPredicted RBP27.42■■□□□ 1.98
SNRPA1-201ENST00000254193 RRBP1Q9P2E9 1410 aaKnown RBP27.41■■□□□ 1.98
SNRPA1-201ENST00000254193 EIF2AK4Q9P2K8 1649 aaKnown RBP27.41■■□□□ 1.98
SNRPA1-201ENST00000254193 RNF17Q9BXT8 1623 aaKnown RBP27.41■■□□□ 1.98
SNRPA1-201ENST00000254193 FAM135AQ9P2D6 1515 aa27.39■■□□□ 1.98
SNRPA1-201ENST00000254193 MROH1Q8NDA8 1641 aa27.38■■□□□ 1.97
SNRPA1-201ENST00000254193 ROCK1Q13464 1354 aa27.37■■□□□ 1.97
SNRPA1-201ENST00000254193 ABCC3O15438 1527 aa27.37■■□□□ 1.97
SNRPA1-201ENST00000254193 ANKRD50Q9ULJ7 1429 aa27.37■■□□□ 1.97
SNRPA1-201ENST00000254193 PZPP20742 1482 aa27.35■■□□□ 1.97
SNRPA1-201ENST00000254193 PREX1Q8TCU6 1659 aa27.35■■□□□ 1.97
SNRPA1-201ENST00000254193 KANK1Q14678 1352 aa27.32■■□□□ 1.96
SNRPA1-201ENST00000254193 TNRQ92752 1358 aa27.31■■□□□ 1.96
SNRPA1-201ENST00000254193 PRDM15P57071 1507 aaPredicted RBP27.31■■□□□ 1.96
SNRPA1-201ENST00000254193 SETD1BQ9UPS6 1966 aaKnown RBP27.3■■□□□ 1.96
SNRPA1-201ENST00000254193 DEPDC5O75140 1603 aa27.24■■□□□ 1.95
SNRPA1-201ENST00000254193 ZC3H13Q5T200 1668 aaKnown RBP27.23■■□□□ 1.95
SNRPA1-201ENST00000254193 ARHGAP31Q2M1Z3 1444 aa27.21■■□□□ 1.95
SNRPA1-201ENST00000254193 MYO3AQ8NEV4 1616 aa27.19■■□□□ 1.94
SNRPA1-201ENST00000254193 A2ML1A8K2U0 1454 aa27.19■■□□□ 1.94
SNRPA1-201ENST00000254193 ERVK-7P63135 1459 aa27.19■■□□□ 1.94
SNRPA1-201ENST00000254193 CEP152O94986 1710 aa27.19■■□□□ 1.94
SNRPA1-201ENST00000254193 VWDEQ8N2E2 1590 aa27.19■■□□□ 1.94
SNRPA1-201ENST00000254193 CEP170BQ9Y4F5 1589 aaPredicted RBP27.18■■□□□ 1.94
SNRPA1-201ENST00000254193 LMTK2Q8IWU2 1503 aa27.18■■□□□ 1.94
SNRPA1-201ENST00000254193 CAMSAP1Q5T5Y3 1602 aa27.18■■□□□ 1.94
SNRPA1-201ENST00000254193 SPATA31D1Q6ZQQ2 1576 aa27.16■■□□□ 1.94
SNRPA1-201ENST00000254193 NCKAP5LQ9HCH0 1330 aa27.15■■□□□ 1.94
SNRPA1-201ENST00000254193 NLRP1Q9C000 1473 aa27.14■■□□□ 1.94
SNRPA1-201ENST00000254193 DMRT2Q9Y5R5 561 aa27.14■■□□□ 1.94
SNRPA1-201ENST00000254193 NAIPQ13075 1403 aa27.13■■□□□ 1.93
SNRPA1-201ENST00000254193 NUP155O75694 1391 aa27.12■■□□□ 1.93
SNRPA1-201ENST00000254193 ZNF142P52746 1687 aaPredicted RBP27.11■■□□□ 1.93
SNRPA1-201ENST00000254193 THEMISQ8N1K5 641 aaPredicted RBP27.1■■□□□ 1.93
SNRPA1-201ENST00000254193 UNC13BO14795 1591 aa27.09■■□□□ 1.93
SNRPA1-201ENST00000254193 EFCAB6Q5THR3 1501 aa27.08■■□□□ 1.93
SNRPA1-201ENST00000254193 PLA2R1Q13018 1463 aa27.07■■□□□ 1.92
SNRPA1-201ENST00000254193 STRCQ7RTU9 1775 aa27.07■■□□□ 1.92
SNRPA1-201ENST00000254193 PKD2Q13563 968 aa27.07■■□□□ 1.92
SNRPA1-201ENST00000254193 HFM1A2PYH4 1435 aa27.07■■□□□ 1.92
SNRPA1-201ENST00000254193 PTPRTO14522 1441 aa27.05■■□□□ 1.92
SNRPA1-201ENST00000254193 UGGT1Q9NYU2 1555 aa27.05■■□□□ 1.92
SNRPA1-201ENST00000254193 NOS1P29475 1434 aa27.04■■□□□ 1.92
SNRPA1-201ENST00000254193 IDI1Q13907 227 aa27.03■■□□□ 1.92
SNRPA1-201ENST00000254193 RPRD2Q5VT52 1461 aaKnown RBP27.01■■□□□ 1.91
SNRPA1-201ENST00000254193 ANKLE2Q86XL3 938 aa27.01■■□□□ 1.91
SNRPA1-201ENST00000254193 STAG3Q9UJ98 1225 aa26.99■■□□□ 1.91
SNRPA1-201ENST00000254193 TRIM52Q96A61 297 aa26.98■■□□□ 1.91
SNRPA1-201ENST00000254193 TET3O43151 1660 aa26.98■■□□□ 1.91
SNRPA1-201ENST00000254193 CFAP65Q6ZU64 1925 aaKnown RBP26.97■■□□□ 1.91
SNRPA1-201ENST00000254193 SLC52A1Q9NWF4 448 aa26.97■■□□□ 1.91
SNRPA1-201ENST00000254193 IQGAP3Q86VI3 1631 aa26.97■■□□□ 1.91
SNRPA1-201ENST00000254193 SYNMO15061 1565 aa26.96■■□□□ 1.91
SNRPA1-201ENST00000254193 GCC2Q8IWJ2 1684 aa26.93■■□□□ 1.9
SNRPA1-201ENST00000254193 LTKP29376 864 aa26.9■■□□□ 1.9
SNRPA1-201ENST00000254193 TXNDC2Q86VQ3 553 aa26.9■■□□□ 1.9
SNRPA1-201ENST00000254193 PIK3C2BO00750 1634 aa26.89■■□□□ 1.9
SNRPA1-201ENST00000254193 TMEM2Q9UHN6 1383 aa26.88■■□□□ 1.89
SNRPA1-201ENST00000254193 CERKQ8TCT0 537 aa26.88■■□□□ 1.89
SNRPA1-201ENST00000254193 E9PCH4 1651 aa26.88■■□□□ 1.89
SNRPA1-201ENST00000254193 NPHP4O75161 1426 aaPredicted RBP26.87■■□□□ 1.89
SNRPA1-201ENST00000254193 UBR1Q8IWV7 1749 aa26.87■■□□□ 1.89
SNRPA1-201ENST00000254193 ZNF335Q9H4Z2 1342 aaPredicted RBP26.87■■□□□ 1.89
SNRPA1-201ENST00000254193 NEURL4Q96JN8 1562 aa26.86■■□□□ 1.89
SNRPA1-201ENST00000254193 SLC4A1APQ9BWU0 796 aaKnown RBP26.86■■□□□ 1.89
SNRPA1-201ENST00000254193 EID1Q9Y6B2 187 aa26.86■■□□□ 1.89
SNRPA1-201ENST00000254193 ARHGAP23Q9P227 1491 aa26.86■■□□□ 1.89
SNRPA1-201ENST00000254193 CHGAP10645 457 aaKnown RBP26.85■■□□□ 1.89
SNRPA1-201ENST00000254193 SLIT1O75093 1534 aa26.84■■□□□ 1.89
SNRPA1-201ENST00000254193 SETD5Q9C0A6 1442 aa26.83■■□□□ 1.89
SNRPA1-201ENST00000254193 MED14O60244 1454 aa26.83■■□□□ 1.89
SNRPA1-201ENST00000254193 SCAF11Q99590 1463 aaKnown RBP26.83■■□□□ 1.89
SNRPA1-201ENST00000254193 ILDR1Q86SU0 546 aaPredicted RBP26.82■■□□□ 1.88
SNRPA1-201ENST00000254193 ADGRB3O60242 1522 aa26.81■■□□□ 1.88
SNRPA1-201ENST00000254193 LTBP4Q8N2S1 1624 aa26.77■■□□□ 1.88
SNRPA1-201ENST00000254193 POLR1AO95602 1720 aaPredicted RBP26.76■■□□□ 1.88
SNRPA1-201ENST00000254193 FOXD1Q16676 465 aa26.76■■□□□ 1.87
SNRPA1-201ENST00000254193 FBXO41Q8TF61 875 aa26.75■■□□□ 1.87
SNRPA1-201ENST00000254193 MPHOSPH9Q99550 1183 aa26.75■■□□□ 1.87
SNRPA1-201ENST00000254193 RAB3GAP2Q9H2M9 1393 aa26.74■■□□□ 1.87
SNRPA1-201ENST00000254193 SENP3Q9H4L4 574 aaPredicted RBP26.73■■□□□ 1.87
SNRPA1-201ENST00000254193 KDM5AP29375 1690 aaKnown RBP26.73■■□□□ 1.87
SNRPA1-201ENST00000254193 RIMS2Q9UQ26 1411 aa26.72■■□□□ 1.87
SNRPA1-201ENST00000254193 NUTM2DQ5VT03 806 aaPredicted RBP26.71■■□□□ 1.87
SNRPA1-201ENST00000254193 TMEM131LA2VDJ0 1609 aa26.71■■□□□ 1.87
SNRPA1-201ENST00000254193 ZFYVE9O95405 1425 aa26.71■■□□□ 1.87
SNRPA1-201ENST00000254193 PPP1R15AO75807 674 aaPredicted RBP26.7■■□□□ 1.86
SNRPA1-201ENST00000254193 HDGFP51858 240 aaKnown RBP26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms