RNA–Protein interactions for RNA: ENST00000252244.3

KRT1-201, Transcript of keratin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT1, Length 2,451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT1-201ENST00000252244 CCDC144AA2RUR9 1427 aa27.02■■□□□ 1.92
KRT1-201ENST00000252244 NEFLP07196 543 aa27.01■■□□□ 1.91
KRT1-201ENST00000252244 DUOX2Q9NRD8 1548 aa27■■□□□ 1.91
KRT1-201ENST00000252244 PLA2R1Q13018 1463 aa26.99■■□□□ 1.91
KRT1-201ENST00000252244 FAM9BQ8IZU0 186 aa26.99■■□□□ 1.91
KRT1-201ENST00000252244 IQGAP3Q86VI3 1631 aa26.99■■□□□ 1.91
KRT1-201ENST00000252244 ABCC1P33527 1531 aa26.99■■□□□ 1.91
KRT1-201ENST00000252244 DHX29Q7Z478 1369 aaKnown RBP26.98■■□□□ 1.91
KRT1-201ENST00000252244 TRAPPC8Q9Y2L5 1435 aa26.97■■□□□ 1.91
KRT1-201ENST00000252244 CNGB1Q14028 1251 aaPredicted RBP26.97■■□□□ 1.91
KRT1-201ENST00000252244 RGL3Q3MIN7 710 aa26.97■■□□□ 1.91
KRT1-201ENST00000252244 ST20-MTHFSA0A0A6YYL1 179 aa26.95■■□□□ 1.9
KRT1-201ENST00000252244 ARID4BQ4LE39 1312 aaPredicted RBP26.95■■□□□ 1.9
KRT1-201ENST00000252244 ERBINQ96RT1 1412 aa26.94■■□□□ 1.9
KRT1-201ENST00000252244 ROCK2O75116 1388 aaKnown RBP26.94■■□□□ 1.9
KRT1-201ENST00000252244 MAGI2Q86UL8 1455 aa26.91■■□□□ 1.9
KRT1-201ENST00000252244 PRAG1Q86YV5 1406 aa26.91■■□□□ 1.9
KRT1-201ENST00000252244 TRPM1Q7Z4N2 1603 aa26.89■■□□□ 1.89
KRT1-201ENST00000252244 AFAP1Q8N556 730 aa26.89■■□□□ 1.89
KRT1-201ENST00000252244 A2MP01023 1474 aa26.88■■□□□ 1.89
KRT1-201ENST00000252244 SPAG9O60271 1321 aaKnown RBP26.87■■□□□ 1.89
KRT1-201ENST00000252244 WDR7Q9Y4E6 1490 aa26.86■■□□□ 1.89
KRT1-201ENST00000252244 NBPF1Q3BBV0 1214 aa26.84■■□□□ 1.89
KRT1-201ENST00000252244 ARAP3Q8WWN8 1544 aa26.84■■□□□ 1.89
KRT1-201ENST00000252244 ZFYVE16Q7Z3T8 1539 aa26.82■■□□□ 1.88
KRT1-201ENST00000252244 ATP10AO60312 1499 aa26.81■■□□□ 1.88
KRT1-201ENST00000252244 TSHZ2Q9NRE2 1034 aa26.79■■□□□ 1.88
KRT1-201ENST00000252244 RTEL1-TNFRSF6BF6WH68 1400 aa26.78■■□□□ 1.88
KRT1-201ENST00000252244 ZBED9Q6R2W3 1325 aa26.78■■□□□ 1.88
KRT1-201ENST00000252244 FANCAO15360 1455 aa26.78■■□□□ 1.88
KRT1-201ENST00000252244 ABCA9Q8IUA7 1624 aa26.75■■□□□ 1.87
KRT1-201ENST00000252244 IRX6P78412 446 aaPredicted RBP26.75■■□□□ 1.87
KRT1-201ENST00000252244 GPRASP1Q5JY77 1395 aa26.75■■□□□ 1.87
KRT1-201ENST00000252244 E9PCH4 1651 aa26.74■■□□□ 1.87
KRT1-201ENST00000252244 ASXL2Q76L83 1435 aa26.71■■□□□ 1.87
KRT1-201ENST00000252244 ATP7AQ04656 1500 aa26.7■■□□□ 1.87
KRT1-201ENST00000252244 EIF2AK4Q9P2K8 1649 aaKnown RBP26.7■■□□□ 1.86
KRT1-201ENST00000252244 PRDM15P57071 1507 aaPredicted RBP26.7■■□□□ 1.86
KRT1-201ENST00000252244 MYT1LQ9UL68 1186 aa26.7■■□□□ 1.86
KRT1-201ENST00000252244 LAMC1P11047 1609 aa26.69■■□□□ 1.86
KRT1-201ENST00000252244 INO80Q9ULG1 1556 aaPredicted RBP26.69■■□□□ 1.86
KRT1-201ENST00000252244 ADGRL1O94910 1474 aa26.69■■□□□ 1.86
KRT1-201ENST00000252244 SCAPERQ9BY12 1400 aa26.67■■□□□ 1.86
KRT1-201ENST00000252244 DEPDC5O75140 1603 aa26.67■■□□□ 1.86
KRT1-201ENST00000252244 TMC1Q8TDI8 760 aa26.66■■□□□ 1.86
KRT1-201ENST00000252244 TESK2Q96S53 571 aa26.64■■□□□ 1.86
KRT1-201ENST00000252244 TRPM2O94759 1503 aa26.64■■□□□ 1.85
KRT1-201ENST00000252244 PNISRQ8TF01 805 aaKnown RBP26.64■■□□□ 1.85
KRT1-201ENST00000252244 SPHKAPQ2M3C7 1700 aa26.64■■□□□ 1.85
KRT1-201ENST00000252244 DISP3Q9P2K9 1392 aa26.63■■□□□ 1.85
KRT1-201ENST00000252244 KIF3BO15066 747 aa26.63■■□□□ 1.85
KRT1-201ENST00000252244 COL17A1Q9UMD9 1497 aaPredicted RBP26.62■■□□□ 1.85
KRT1-201ENST00000252244 TET3O43151 1660 aa26.61■■□□□ 1.85
KRT1-201ENST00000252244 MYBBP1AQ9BQG0 1328 aaKnown RBP26.6■■□□□ 1.85
KRT1-201ENST00000252244 RALBP1Q15311 655 aa26.6■■□□□ 1.85
KRT1-201ENST00000252244 CLTCL1P53675 1640 aa26.6■■□□□ 1.85
KRT1-201ENST00000252244 RNF17Q9BXT8 1623 aaKnown RBP26.6■■□□□ 1.85
KRT1-201ENST00000252244 PTPRTO14522 1441 aa26.6■■□□□ 1.85
KRT1-201ENST00000252244 SENP3-EIF4A1A0A087X0R7 540 aa26.6■■□□□ 1.85
KRT1-201ENST00000252244 CEP152O94986 1710 aa26.6■■□□□ 1.85
KRT1-201ENST00000252244 KANK1Q14678 1352 aa26.59■■□□□ 1.85
KRT1-201ENST00000252244 KTN1Q86UP2 1357 aaKnown RBP26.58■■□□□ 1.85
KRT1-201ENST00000252244 OSCARQ8IYS5 282 aa26.58■■□□□ 1.85
KRT1-201ENST00000252244 MADDQ8WXG6 1647 aa26.58■■□□□ 1.84
KRT1-201ENST00000252244 VWDEQ8N2E2 1590 aa26.57■■□□□ 1.84
KRT1-201ENST00000252244 BRD4O60885 1362 aaPredicted RBP26.56■■□□□ 1.84
KRT1-201ENST00000252244 PER1O15534 1290 aaPredicted RBP26.55■■□□□ 1.84
KRT1-201ENST00000252244 NPM1P06748 294 aaKnown RBP eCLIP26.55■■□□□ 1.84
KRT1-201ENST00000252244 TMF1P82094 1093 aa26.54■■□□□ 1.84
KRT1-201ENST00000252244 MROH1Q8NDA8 1641 aa26.53■■□□□ 1.84
KRT1-201ENST00000252244 KIDINS220Q9ULH0 1771 aa26.52■■□□□ 1.84
KRT1-201ENST00000252244 PARD3Q8TEW0 1356 aa26.52■■□□□ 1.84
KRT1-201ENST00000252244 SMG6Q86US8 1419 aaKnown RBP26.51■■□□□ 1.83
KRT1-201ENST00000252244 LRPPRCP42704 1394 aaKnown RBP26.51■■□□□ 1.83
KRT1-201ENST00000252244 PANK3Q9H999 370 aa26.49■■□□□ 1.83
KRT1-201ENST00000252244 ERICH6BQ5W0A0 696 aa26.48■■□□□ 1.83
KRT1-201ENST00000252244 IQGAP1P46940 1657 aa26.48■■□□□ 1.83
KRT1-201ENST00000252244 NLRP13Q86W25 1043 aa26.47■■□□□ 1.83
KRT1-201ENST00000252244 CC2D1BQ5T0F9 858 aaKnown RBP26.47■■□□□ 1.83
KRT1-201ENST00000252244 NUDCQ9Y266 331 aa26.47■■□□□ 1.83
KRT1-201ENST00000252244 UGGT1Q9NYU2 1555 aa26.46■■□□□ 1.83
KRT1-201ENST00000252244 ZNF518AQ6AHZ1 1483 aa26.46■■□□□ 1.83
KRT1-201ENST00000252244 PPP4R2Q9NY27 417 aa26.44■■□□□ 1.82
KRT1-201ENST00000252244 CD109Q6YHK3 1445 aa26.44■■□□□ 1.82
KRT1-201ENST00000252244 STAC3Q96MF2 364 aa26.43■■□□□ 1.82
KRT1-201ENST00000252244 EFCAB6Q5THR3 1501 aa26.42■■□□□ 1.82
KRT1-201ENST00000252244 WASHC2CQ9Y4E1 1318 aa26.41■■□□□ 1.82
KRT1-201ENST00000252244 SCAF11Q99590 1463 aaKnown RBP26.41■■□□□ 1.82
KRT1-201ENST00000252244 PPRC1Q5VV67 1664 aaKnown RBP26.4■■□□□ 1.82
KRT1-201ENST00000252244 POGZQ7Z3K3 1410 aa26.37■■□□□ 1.81
KRT1-201ENST00000252244 KIF1BO60333 1816 aa26.37■■□□□ 1.81
KRT1-201ENST00000252244 CFAP74Q9C0B2 1584 aa26.36■■□□□ 1.81
KRT1-201ENST00000252244 NEURL4Q96JN8 1562 aa26.35■■□□□ 1.81
KRT1-201ENST00000252244 RBM19Q9Y4C8 960 aaKnown RBP26.35■■□□□ 1.81
KRT1-201ENST00000252244 B4GALNT3Q6L9W6 998 aa26.34■■□□□ 1.81
KRT1-201ENST00000252244 ADGRF5Q8IZF2 1346 aa26.34■■□□□ 1.81
KRT1-201ENST00000252244 CFAP70Q5T0N1 1121 aa26.33■■□□□ 1.81
KRT1-201ENST00000252244 KIAA1210Q9ULL0 1709 aa26.33■■□□□ 1.81
KRT1-201ENST00000252244 SALL2Q9Y467 1007 aaPredicted RBP26.33■■□□□ 1.81
KRT1-201ENST00000252244 MAP3K4Q9Y6R4 1608 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms