RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 KDM5DQ9BY66 1539 aa28.2■■■□□ 2.11
SBDS-201ENST00000246868 REREQ9P2R6 1566 aa28.2■■■□□ 2.1
SBDS-201ENST00000246868 MPHOSPH9Q99550 1183 aa28.19■■■□□ 2.1
SBDS-201ENST00000246868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.19■■■□□ 2.1
SBDS-201ENST00000246868 SLC4A1APQ9BWU0 796 aaKnown RBP28.18■■■□□ 2.1
SBDS-201ENST00000246868 CLSPNQ9HAW4 1339 aa28.18■■■□□ 2.1
SBDS-201ENST00000246868 BCORL1Q5H9F3 1711 aa28.17■■■□□ 2.1
SBDS-201ENST00000246868 DEPDC5O75140 1603 aa28.17■■■□□ 2.1
SBDS-201ENST00000246868 KANK1Q14678 1352 aa28.16■■■□□ 2.1
SBDS-201ENST00000246868 PZPP20742 1482 aa28.15■■■□□ 2.1
SBDS-201ENST00000246868 RNF17Q9BXT8 1623 aaKnown RBP28.14■■■□□ 2.1
SBDS-201ENST00000246868 FAM135AQ9P2D6 1515 aa28.13■■■□□ 2.09
SBDS-201ENST00000246868 IQGAP3Q86VI3 1631 aa28.13■■■□□ 2.09
SBDS-201ENST00000246868 PRDM15P57071 1507 aaPredicted RBP28.12■■■□□ 2.09
SBDS-201ENST00000246868 AGLP35573 1532 aa28.1■■■□□ 2.09
SBDS-201ENST00000246868 GGT6Q6P531 493 aa28.09■■■□□ 2.09
SBDS-201ENST00000246868 MROH1Q8NDA8 1641 aa28.08■■■□□ 2.09
SBDS-201ENST00000246868 PKD2Q13563 968 aa28.06■■■□□ 2.08
SBDS-201ENST00000246868 VWDEQ8N2E2 1590 aa28.05■■■□□ 2.08
SBDS-201ENST00000246868 ZEB1P37275 1124 aaPredicted RBP28.03■■■□□ 2.08
SBDS-201ENST00000246868 ARID4BQ4LE39 1312 aaPredicted RBP28■■■□□ 2.07
SBDS-201ENST00000246868 TET3O43151 1660 aa27.99■■■□□ 2.07
SBDS-201ENST00000246868 WASHC2CQ9Y4E1 1318 aa27.99■■■□□ 2.07
SBDS-201ENST00000246868 SIGLEC1Q9BZZ2 1709 aa27.99■■■□□ 2.07
SBDS-201ENST00000246868 FOXD1Q16676 465 aa27.99■■■□□ 2.07
SBDS-201ENST00000246868 PPP6R1Q9UPN7 881 aa27.97■■■□□ 2.07
SBDS-201ENST00000246868 LMTK2Q8IWU2 1503 aa27.97■■■□□ 2.07
SBDS-201ENST00000246868 CEP152O94986 1710 aa27.96■■■□□ 2.07
SBDS-201ENST00000246868 ZC3H13Q5T200 1668 aaKnown RBP27.96■■■□□ 2.07
SBDS-201ENST00000246868 ABCC3O15438 1527 aa27.95■■■□□ 2.06
SBDS-201ENST00000246868 ANKRD30BQ9BXX2 1392 aa27.94■■■□□ 2.06
SBDS-201ENST00000246868 MLECQ14165 292 aa27.92■■■□□ 2.06
SBDS-201ENST00000246868 EFCAB6Q5THR3 1501 aa27.91■■■□□ 2.06
SBDS-201ENST00000246868 E9PCH4 1651 aa27.9■■■□□ 2.06
SBDS-201ENST00000246868 NEUROD1Q13562 356 aa27.88■■■□□ 2.05
SBDS-201ENST00000246868 SIN3AQ96ST3 1273 aa27.88■■■□□ 2.05
SBDS-201ENST00000246868 ESF1Q9H501 851 aaKnown RBP27.88■■■□□ 2.05
SBDS-201ENST00000246868 CAMSAP1Q5T5Y3 1602 aa27.88■■■□□ 2.05
SBDS-201ENST00000246868 RPRD2Q5VT52 1461 aaKnown RBP27.86■■■□□ 2.05
SBDS-201ENST00000246868 ARHGAP31Q2M1Z3 1444 aa27.81■■■□□ 2.04
SBDS-201ENST00000246868 CLTCQ00610 1675 aaKnown RBP27.81■■■□□ 2.04
SBDS-201ENST00000246868 SPHKAPQ2M3C7 1700 aa27.8■■■□□ 2.04
SBDS-201ENST00000246868 NPATQ14207 1427 aa27.8■■■□□ 2.04
SBDS-201ENST00000246868 CCDC144AA2RUR9 1427 aa27.79■■■□□ 2.04
SBDS-201ENST00000246868 PTPRTO14522 1441 aa27.78■■■□□ 2.04
SBDS-201ENST00000246868 CNTLNQ9NXG0 1405 aa27.78■■■□□ 2.04
SBDS-201ENST00000246868 TIMELESSQ9UNS1 1208 aa27.78■■■□□ 2.04
SBDS-201ENST00000246868 PLA2R1Q13018 1463 aa27.77■■■□□ 2.04
SBDS-201ENST00000246868 TONSLQ96HA7 1378 aa27.76■■■□□ 2.04
SBDS-201ENST00000246868 TRPM2O94759 1503 aa27.76■■■□□ 2.03
SBDS-201ENST00000246868 CFAP65Q6ZU64 1925 aaKnown RBP27.75■■■□□ 2.03
SBDS-201ENST00000246868 FER1L4A9Z1Z3 1794 aa27.71■■■□□ 2.03
SBDS-201ENST00000246868 MROH2AA6NES4 1674 aa27.7■■■□□ 2.02
SBDS-201ENST00000246868 ZMYM3Q14202 1370 aa27.69■■■□□ 2.02
SBDS-201ENST00000246868 NOS1P29475 1434 aa27.68■■■□□ 2.02
SBDS-201ENST00000246868 PREX1Q8TCU6 1659 aa27.67■■■□□ 2.02
SBDS-201ENST00000246868 CLTCL1P53675 1640 aa27.65■■■□□ 2.02
SBDS-201ENST00000246868 ERVK-7P63135 1459 aa27.64■■■□□ 2.01
SBDS-201ENST00000246868 SYNMO15061 1565 aa27.6■■■□□ 2.01
SBDS-201ENST00000246868 FBXO31Q5XUX0 539 aaPredicted RBP27.6■■■□□ 2.01
SBDS-201ENST00000246868 ADAMTSL3P82987 1691 aa27.6■■■□□ 2.01
SBDS-201ENST00000246868 MADDQ8WXG6 1647 aa27.6■■■□□ 2.01
SBDS-201ENST00000246868 SPATA31D1Q6ZQQ2 1576 aa27.6■■■□□ 2.01
SBDS-201ENST00000246868 SLC52A1Q9NWF4 448 aa27.59■■■□□ 2.01
SBDS-201ENST00000246868 UGGT1Q9NYU2 1555 aa27.59■■■□□ 2.01
SBDS-201ENST00000246868 L3MBTL2Q969R5 705 aa27.59■■■□□ 2.01
SBDS-201ENST00000246868 KIF1BO60333 1816 aa27.58■■■□□ 2.01
SBDS-201ENST00000246868 PIK3C2BO00750 1634 aa27.56■■■□□ 2
SBDS-201ENST00000246868 RIMS1Q86UR5 1692 aaKnown RBP27.56■■■□□ 2
SBDS-201ENST00000246868 C3P01024 1663 aa27.55■■■□□ 2
SBDS-201ENST00000246868 SPATA31E1Q6ZUB1 1445 aa27.54■■■□□ 2
SBDS-201ENST00000246868 PPP1R15AO75807 674 aaPredicted RBP27.54■■■□□ 2
SBDS-201ENST00000246868 RGL3Q3MIN7 710 aa27.54■■■□□ 2
SBDS-201ENST00000246868 NEURL4Q96JN8 1562 aa27.53■■■□□ 2
SBDS-201ENST00000246868 TNRQ92752 1358 aa27.51■■□□□ 1.99
SBDS-201ENST00000246868 CHGAP10645 457 aaKnown RBP27.51■■□□□ 1.99
SBDS-201ENST00000246868 IDI1Q13907 227 aa27.51■■□□□ 1.99
SBDS-201ENST00000246868 CEBPAP49715 358 aaPredicted RBP27.5■■□□□ 1.99
SBDS-201ENST00000246868 ADGRB3O60242 1522 aa27.48■■□□□ 1.99
SBDS-201ENST00000246868 DCAF11Q8TEB1 546 aa27.48■■□□□ 1.99
SBDS-201ENST00000246868 PLPPR3Q6T4P5 718 aa27.47■■□□□ 1.99
SBDS-201ENST00000246868 ZNF326Q5BKZ1 582 aaKnown RBP27.45■■□□□ 1.98
SBDS-201ENST00000246868 STAG3Q9UJ98 1225 aa27.45■■□□□ 1.98
SBDS-201ENST00000246868 STAC3Q96MF2 364 aa27.44■■□□□ 1.98
SBDS-201ENST00000246868 KDM2AQ9Y2K7 1162 aa27.43■■□□□ 1.98
SBDS-201ENST00000246868 NLRP1Q9C000 1473 aa27.41■■□□□ 1.98
SBDS-201ENST00000246868 TMEM131LA2VDJ0 1609 aa27.4■■□□□ 1.98
SBDS-201ENST00000246868 RPGRIP1LQ68CZ1 1315 aa27.39■■□□□ 1.98
SBDS-201ENST00000246868 PTPRMP28827 1452 aa27.37■■□□□ 1.97
SBDS-201ENST00000246868 UHRF1BP1Q6BDS2 1440 aa27.36■■□□□ 1.97
SBDS-201ENST00000246868 MYO5BQ9ULV0 1848 aa27.36■■□□□ 1.97
SBDS-201ENST00000246868 KDM5AP29375 1690 aaKnown RBP27.34■■□□□ 1.97
SBDS-201ENST00000246868 IFT172Q9UG01 1749 aa27.34■■□□□ 1.97
SBDS-201ENST00000246868 NBPF8Q3BBV2 869 aa27.33■■□□□ 1.97
SBDS-201ENST00000246868 SETD1BQ9UPS6 1966 aaKnown RBP27.33■■□□□ 1.97
SBDS-201ENST00000246868 A2ML1A8K2U0 1454 aa27.33■■□□□ 1.96
SBDS-201ENST00000246868 PPLO60437 1756 aa27.32■■□□□ 1.96
SBDS-201ENST00000246868 PRAG1Q86YV5 1406 aa27.32■■□□□ 1.96
SBDS-201ENST00000246868 MYOM2P54296 1465 aa27.32■■□□□ 1.96
SBDS-201ENST00000246868 MYO3AQ8NEV4 1616 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms