RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 NUTM2DQ5VT03 806 aaPredicted RBP24.89■■□□□ 1.58
SOX4-201ENST00000244745 KIF3BO15066 747 aa24.89■■□□□ 1.58
SOX4-201ENST00000244745 CCDC144AA2RUR9 1427 aa24.89■■□□□ 1.58
SOX4-201ENST00000244745 KIAA1211Q6ZU35 1233 aa24.89■■□□□ 1.58
SOX4-201ENST00000244745 HDGFP51858 240 aaKnown RBP24.86■■□□□ 1.57
SOX4-201ENST00000244745 VSIG10Q8N0Z9 540 aa24.86■■□□□ 1.57
SOX4-201ENST00000244745 BCL2L13Q9BXK5 485 aa24.84■■□□□ 1.57
SOX4-201ENST00000244745 CCDC7Q96M83 1385 aa24.82■■□□□ 1.56
SOX4-201ENST00000244745 TULP1O00294 542 aaPredicted RBP24.82■■□□□ 1.56
SOX4-201ENST00000244745 CNTLNQ9NXG0 1405 aa24.82■■□□□ 1.56
SOX4-201ENST00000244745 NOL8Q76FK4 1167 aaKnown RBP24.81■■□□□ 1.56
SOX4-201ENST00000244745 FGD6Q6ZV73 1430 aa24.81■■□□□ 1.56
SOX4-201ENST00000244745 TRIM6-TRIM34B2RNG4 842 aa24.8■■□□□ 1.56
SOX4-201ENST00000244745 TERF2IPQ9NYB0 399 aa24.8■■□□□ 1.56
SOX4-201ENST00000244745 TRAK1Q9UPV9 953 aa24.8■■□□□ 1.56
SOX4-201ENST00000244745 SYAP1Q96A49 352 aaPredicted RBP24.8■■□□□ 1.56
SOX4-201ENST00000244745 SPAG9O60271 1321 aaKnown RBP24.8■■□□□ 1.56
SOX4-201ENST00000244745 RSPH4AQ5TD94 716 aa24.79■■□□□ 1.56
SOX4-201ENST00000244745 KIF7Q2M1P5 1343 aa24.79■■□□□ 1.56
SOX4-201ENST00000244745 LRRC9Q6ZRR7 1453 aa24.79■■□□□ 1.56
SOX4-201ENST00000244745 FANCD2Q9BXW9 1451 aa24.79■■□□□ 1.56
SOX4-201ENST00000244745 E9PSI1 815 aa24.78■■□□□ 1.56
SOX4-201ENST00000244745 COG6Q9Y2V7 657 aa24.77■■□□□ 1.56
SOX4-201ENST00000244745 SLC4A10Q6U841 1118 aa24.76■■□□□ 1.55
SOX4-201ENST00000244745 UACAQ9BZF9 1416 aa24.76■■□□□ 1.55
SOX4-201ENST00000244745 DDX11L8A8MPP1 907 aa24.76■■□□□ 1.55
SOX4-201ENST00000244745 CUX1P39880 1505 aa24.75■■□□□ 1.55
SOX4-201ENST00000244745 STK31Q9BXU1 1019 aa24.75■■□□□ 1.55
SOX4-201ENST00000244745 IGF1RP08069 1367 aa24.75■■□□□ 1.55
SOX4-201ENST00000244745 PAK3O75914 559 aaPredicted RBP24.74■■□□□ 1.55
SOX4-201ENST00000244745 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.74■■□□□ 1.55
SOX4-201ENST00000244745 FOXD4L5Q5VV16 416 aaPredicted RBP24.74■■□□□ 1.55
SOX4-201ENST00000244745 FOXD4L4Q8WXT5 416 aaPredicted RBP24.74■■□□□ 1.55
SOX4-201ENST00000244745 FGD5Q6ZNL6 1462 aa24.73■■□□□ 1.55
SOX4-201ENST00000244745 HMMRO75330 724 aa24.73■■□□□ 1.55
SOX4-201ENST00000244745 MYOM3Q5VTT5 1437 aa24.72■■□□□ 1.55
SOX4-201ENST00000244745 APAF1O14727 1248 aa24.72■■□□□ 1.55
SOX4-201ENST00000244745 GNL2Q13823 731 aaKnown RBP24.71■■□□□ 1.55
SOX4-201ENST00000244745 WASHC2AQ641Q2 1341 aa24.71■■□□□ 1.55
SOX4-201ENST00000244745 JPH4Q96JJ6 628 aa24.7■■□□□ 1.54
SOX4-201ENST00000244745 ZKSCAN2Q63HK3 967 aa24.69■■□□□ 1.54
SOX4-201ENST00000244745 ANKRD45Q5TZF3 282 aa24.69■■□□□ 1.54
SOX4-201ENST00000244745 ST18O60284 1047 aa24.68■■□□□ 1.54
SOX4-201ENST00000244745 CGNL1Q0VF96 1302 aa24.67■■□□□ 1.54
SOX4-201ENST00000244745 NPHP1O15259 732 aa24.67■■□□□ 1.54
SOX4-201ENST00000244745 WASHC2CQ9Y4E1 1318 aa24.67■■□□□ 1.54
SOX4-201ENST00000244745 LMOD3Q0VAK6 560 aa24.66■■□□□ 1.54
SOX4-201ENST00000244745 ELL2O00472 640 aaPredicted RBP24.65■■□□□ 1.54
SOX4-201ENST00000244745 RRBP1Q9P2E9 1410 aaKnown RBP24.64■■□□□ 1.54
SOX4-201ENST00000244745 RAD54L2Q9Y4B4 1467 aa24.64■■□□□ 1.54
SOX4-201ENST00000244745 ZNF644Q9H582 1327 aaPredicted RBP24.64■■□□□ 1.53
SOX4-201ENST00000244745 GPATCH3Q96I76 525 aa24.63■■□□□ 1.53
SOX4-201ENST00000244745 HSP90B1P14625 803 aaKnown RBP24.63■■□□□ 1.53
SOX4-201ENST00000244745 HTATSF1O43719 755 aaKnown RBP24.62■■□□□ 1.53
SOX4-201ENST00000244745 ARAP1Q96P48 1450 aa24.62■■□□□ 1.53
SOX4-201ENST00000244745 TNNT3P45378 269 aaPredicted RBP24.61■■□□□ 1.53
SOX4-201ENST00000244745 SYNJ1O43426 1573 aa24.6■■□□□ 1.53
SOX4-201ENST00000244745 DDX49Q9Y6V7 483 aaKnown RBP24.6■■□□□ 1.53
SOX4-201ENST00000244745 NCOA2Q15596 1464 aa24.6■■□□□ 1.53
SOX4-201ENST00000244745 CSPP1Q1MSJ5 1256 aa24.59■■□□□ 1.53
SOX4-201ENST00000244745 PRDM2Q13029 1718 aa24.59■■□□□ 1.53
SOX4-201ENST00000244745 ANO8Q9HCE9 1232 aaPredicted RBP24.57■■□□□ 1.52
SOX4-201ENST00000244745 GAPVD1Q14C86 1478 aa24.57■■□□□ 1.52
SOX4-201ENST00000244745 PHF14O94880 888 aa24.57■■□□□ 1.52
SOX4-201ENST00000244745 CASKIN1Q8WXD9 1431 aa24.57■■□□□ 1.52
SOX4-201ENST00000244745 SKOR2Q2VWA4 1001 aaPredicted RBP24.56■■□□□ 1.52
SOX4-201ENST00000244745 NFKBIBQ15653 356 aa24.56■■□□□ 1.52
SOX4-201ENST00000244745 RILPL2Q969X0 211 aa24.56■■□□□ 1.52
SOX4-201ENST00000244745 ERICH3Q5RHP9 1530 aa24.56■■□□□ 1.52
SOX4-201ENST00000244745 EVC2Q86UK5 1308 aa24.55■■□□□ 1.52
SOX4-201ENST00000244745 CHMP3Q9Y3E7 222 aa24.54■■□□□ 1.52
SOX4-201ENST00000244745 ZNF330Q9Y3S2 320 aaPredicted RBP24.54■■□□□ 1.52
SOX4-201ENST00000244745 FYCO1Q9BQS8 1478 aa24.54■■□□□ 1.52
SOX4-201ENST00000244745 FOXD4L6Q3SYB3 417 aaPredicted RBP24.54■■□□□ 1.52
SOX4-201ENST00000244745 FOXD4L3Q6VB84 417 aaPredicted RBP24.54■■□□□ 1.52
SOX4-201ENST00000244745 NUTM2FA1L443 756 aa24.53■■□□□ 1.52
SOX4-201ENST00000244745 DZIP1LQ8IYY4 767 aaKnown RBP24.52■■□□□ 1.52
SOX4-201ENST00000244745 DDX19BQ9UMR2 479 aa24.52■■□□□ 1.52
SOX4-201ENST00000244745 AMPHP49418 695 aa24.52■■□□□ 1.52
SOX4-201ENST00000244745 KIF16BQ96L93 1317 aa24.52■■□□□ 1.52
SOX4-201ENST00000244745 LTV1Q96GA3 475 aaPredicted RBP24.51■■□□□ 1.51
SOX4-201ENST00000244745 BRD4O60885 1362 aaPredicted RBP24.51■■□□□ 1.51
SOX4-201ENST00000244745 CSB-PGBD3P0DP91 1061 aa24.51■■□□□ 1.51
SOX4-201ENST00000244745 TPM4P67936 248 aa24.51■■□□□ 1.51
SOX4-201ENST00000244745 IL27Q8NEV9 243 aa24.51■■□□□ 1.51
SOX4-201ENST00000244745 NGDNQ8NEJ9 315 aaKnown RBP24.49■■□□□ 1.51
SOX4-201ENST00000244745 CDCA7LQ96GN5 454 aa24.49■■□□□ 1.51
SOX4-201ENST00000244745 PANK1Q8TE04 598 aa24.48■■□□□ 1.51
SOX4-201ENST00000244745 MIA2Q96PC5 1412 aa24.48■■□□□ 1.51
SOX4-201ENST00000244745 RUNDC1Q96C34 613 aa24.48■■□□□ 1.51
SOX4-201ENST00000244745 AKNAQ7Z591 1439 aa24.48■■□□□ 1.51
SOX4-201ENST00000244745 GORABQ5T7V8 394 aa24.47■■□□□ 1.51
SOX4-201ENST00000244745 CHMP5Q9NZZ3 219 aa24.47■■□□□ 1.51
SOX4-201ENST00000244745 BRPF3Q9ULD4 1205 aa24.47■■□□□ 1.51
SOX4-201ENST00000244745 PTPRGP23470 1445 aa24.47■■□□□ 1.51
SOX4-201ENST00000244745 CHMP4AQ9BY43 222 aa24.47■■□□□ 1.51
SOX4-201ENST00000244745 MINK1Q8N4C8 1332 aaPredicted RBP24.47■■□□□ 1.51
SOX4-201ENST00000244745 RIPK4P57078 832 aa24.46■■□□□ 1.51
SOX4-201ENST00000244745 ADAMTS8Q9UP79 889 aa24.46■■□□□ 1.51
SOX4-201ENST00000244745 FAM13BQ9NYF5 915 aa24.45■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms