RNA–Protein interactions for RNA: ENST00000230418.8

PTK7-201, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 3,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-201ENST00000230418 RAPGEF6Q8TEU7 1601 aa19.09■□□□□ 0.65
PTK7-201ENST00000230418 RALBP1Q15311 655 aa19.09■□□□□ 0.65
PTK7-201ENST00000230418 CCDC146Q8IYE0 955 aa19.09■□□□□ 0.65
PTK7-201ENST00000230418 KIAA0556O60303 1618 aa19.08■□□□□ 0.65
PTK7-201ENST00000230418 SCAPERQ9BY12 1400 aa19.08■□□□□ 0.65
PTK7-201ENST00000230418 PBRM1Q86U86 1689 aa19.08■□□□□ 0.65
PTK7-201ENST00000230418 NLRP13Q86W25 1043 aa19.08■□□□□ 0.64
PTK7-201ENST00000230418 ANP32AP39687 249 aaKnown RBP19.08■□□□□ 0.64
PTK7-201ENST00000230418 SAMD9Q5K651 1589 aa19.05■□□□□ 0.64
PTK7-201ENST00000230418 RAPGEF3O95398 923 aa19.05■□□□□ 0.64
PTK7-201ENST00000230418 CFAP70Q5T0N1 1121 aa19.05■□□□□ 0.64
PTK7-201ENST00000230418 U2SURPO15042 1029 aaKnown RBP19.05■□□□□ 0.64
PTK7-201ENST00000230418 TMEM132EQ6IEE7 984 aa19.04■□□□□ 0.64
PTK7-201ENST00000230418 MORC1Q86VD1 984 aa19.04■□□□□ 0.64
PTK7-201ENST00000230418 RBM19Q9Y4C8 960 aaKnown RBP19.04■□□□□ 0.64
PTK7-201ENST00000230418 MYT1Q01538 1121 aa19.03■□□□□ 0.64
PTK7-201ENST00000230418 RTL5Q5HYW3 569 aaPredicted RBP19.03■□□□□ 0.64
PTK7-201ENST00000230418 MYBBP1AQ9BQG0 1328 aaKnown RBP19.03■□□□□ 0.64
PTK7-201ENST00000230418 NUDCQ9Y266 331 aa19.02■□□□□ 0.64
PTK7-201ENST00000230418 SOX12O15370 315 aa19■□□□□ 0.63
PTK7-201ENST00000230418 FRAT1Q92837 279 aaPredicted RBP19■□□□□ 0.63
PTK7-201ENST00000230418 RCAN3Q9UKA8 241 aa19■□□□□ 0.63
PTK7-201ENST00000230418 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.99■□□□□ 0.63
PTK7-201ENST00000230418 KIF14Q15058 1648 aa18.99■□□□□ 0.63
PTK7-201ENST00000230418 RPRD2Q5VT52 1461 aaKnown RBP18.99■□□□□ 0.63
PTK7-201ENST00000230418 CCDC141Q6ZP82 1450 aa18.99■□□□□ 0.63
PTK7-201ENST00000230418 PLIN1O60240 522 aa18.99■□□□□ 0.63
PTK7-201ENST00000230418 NBR1Q14596 966 aa18.99■□□□□ 0.63
PTK7-201ENST00000230418 FAM69CQ0P6D2 419 aa18.99■□□□□ 0.63
PTK7-201ENST00000230418 ZBED9Q6R2W3 1325 aa18.98■□□□□ 0.63
PTK7-201ENST00000230418 TRHP20396 242 aaPredicted RBP18.98■□□□□ 0.63
PTK7-201ENST00000230418 CFAP53Q96M91 514 aa18.98■□□□□ 0.63
PTK7-201ENST00000230418 PLEKHH2Q8IVE3 1493 aa18.97■□□□□ 0.63
PTK7-201ENST00000230418 TCOF1Q13428 1488 aaKnown RBP18.95■□□□□ 0.62
PTK7-201ENST00000230418 LAS1LQ9Y4W2 734 aaKnown RBP18.95■□□□□ 0.62
PTK7-201ENST00000230418 NUTM2FA1L443 756 aa18.95■□□□□ 0.62
PTK7-201ENST00000230418 CEP170Q5SW79 1584 aa18.94■□□□□ 0.62
PTK7-201ENST00000230418 RRP7AQ9Y3A4 280 aaKnown RBP18.94■□□□□ 0.62
PTK7-201ENST00000230418 C14orf37Q86TY3 774 aa18.93■□□□□ 0.62
PTK7-201ENST00000230418 RGS3P49796 1198 aa18.93■□□□□ 0.62
PTK7-201ENST00000230418 NUP160Q12769 1436 aa18.93■□□□□ 0.62
PTK7-201ENST00000230418 ZBTB7CA1YPR0 619 aa18.92■□□□□ 0.62
PTK7-201ENST00000230418 CDCA7LQ96GN5 454 aa18.91■□□□□ 0.62
PTK7-201ENST00000230418 U2AF1L5P0DN76 240 aaPredicted RBP18.91■□□□□ 0.62
PTK7-201ENST00000230418 U2AF1Q01081 240 aaKnown RBP eCLIP18.91■□□□□ 0.62
PTK7-201ENST00000230418 MINK1Q8N4C8 1332 aaPredicted RBP18.9■□□□□ 0.62
PTK7-201ENST00000230418 KDM6BO15054 1643 aa18.9■□□□□ 0.62
PTK7-201ENST00000230418 EIF3AQ14152 1382 aaKnown RBP18.89■□□□□ 0.61
PTK7-201ENST00000230418 PNISRQ8TF01 805 aaKnown RBP18.86■□□□□ 0.61
PTK7-201ENST00000230418 APAF1O14727 1248 aa18.86■□□□□ 0.61
PTK7-201ENST00000230418 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.86■□□□□ 0.61
PTK7-201ENST00000230418 EXOC6Q8TAG9 804 aa18.86■□□□□ 0.61
PTK7-201ENST00000230418 ZBTB47Q9UFB7 747 aaPredicted RBP18.86■□□□□ 0.61
PTK7-201ENST00000230418 SYCP2Q9BX26 1530 aa18.85■□□□□ 0.61
PTK7-201ENST00000230418 MAPK8IP3Q9UPT6 1336 aa18.85■□□□□ 0.61
PTK7-201ENST00000230418 ADAMTS8Q9UP79 889 aa18.85■□□□□ 0.61
PTK7-201ENST00000230418 VGFO15240 615 aaPredicted RBP18.83■□□□□ 0.6
PTK7-201ENST00000230418 PZPP20742 1482 aa18.82■□□□□ 0.6
PTK7-201ENST00000230418 CABP2Q9NPB3 220 aa18.82■□□□□ 0.6
PTK7-201ENST00000230418 CENPJQ9HC77 1338 aaPredicted RBP18.82■□□□□ 0.6
PTK7-201ENST00000230418 GOLGA2Q08379 1002 aa18.82■□□□□ 0.6
PTK7-201ENST00000230418 SLC12A5Q9H2X9 1139 aa18.82■□□□□ 0.6
PTK7-201ENST00000230418 TRAPPC8Q9Y2L5 1435 aa18.82■□□□□ 0.6
PTK7-201ENST00000230418 BCL2L13Q9BXK5 485 aa18.8■□□□□ 0.6
PTK7-201ENST00000230418 CLUAP1Q96AJ1 413 aa18.79■□□□□ 0.6
PTK7-201ENST00000230418 ADGRF5Q8IZF2 1346 aa18.78■□□□□ 0.6
PTK7-201ENST00000230418 DNMT1P26358 1616 aaKnown RBP18.78■□□□□ 0.6
PTK7-201ENST00000230418 ADGRL1O94910 1474 aa18.77■□□□□ 0.6
PTK7-201ENST00000230418 FTSJ3Q8IY81 847 aaKnown RBP18.77■□□□□ 0.6
PTK7-201ENST00000230418 RRP1P56182 461 aaKnown RBP18.76■□□□□ 0.59
PTK7-201ENST00000230418 HDGFL2Q7Z4V5 671 aaPredicted RBP18.76■□□□□ 0.59
PTK7-201ENST00000230418 PPP2R1AP30153 589 aa18.75■□□□□ 0.59
PTK7-201ENST00000230418 FANCAO15360 1455 aa18.75■□□□□ 0.59
PTK7-201ENST00000230418 LMOD2Q6P5Q4 547 aa18.75■□□□□ 0.59
PTK7-201ENST00000230418 ANP32EQ9BTT0 268 aa18.75■□□□□ 0.59
PTK7-201ENST00000230418 ERBINQ96RT1 1412 aa18.75■□□□□ 0.59
PTK7-201ENST00000230418 ITSN2Q9NZM3 1697 aa18.75■□□□□ 0.59
PTK7-201ENST00000230418 CD109Q6YHK3 1445 aa18.75■□□□□ 0.59
PTK7-201ENST00000230418 GGNBP2Q9H3C7 697 aa18.74■□□□□ 0.59
PTK7-201ENST00000230418 PLCH2O75038 1416 aa18.74■□□□□ 0.59
PTK7-201ENST00000230418 BRD4O60885 1362 aaPredicted RBP18.73■□□□□ 0.59
PTK7-201ENST00000230418 ERICH6BQ5W0A0 696 aa18.73■□□□□ 0.59
PTK7-201ENST00000230418 CRBNQ96SW2 442 aa18.73■□□□□ 0.59
PTK7-201ENST00000230418 DISP3Q9P2K9 1392 aa18.73■□□□□ 0.59
PTK7-201ENST00000230418 EVC2Q86UK5 1308 aa18.72■□□□□ 0.59
PTK7-201ENST00000230418 PDE3BQ13370 1112 aa18.72■□□□□ 0.59
PTK7-201ENST00000230418 TERF2IPQ9NYB0 399 aa18.7■□□□□ 0.58
PTK7-201ENST00000230418 FAM135AQ9P2D6 1515 aa18.69■□□□□ 0.58
PTK7-201ENST00000230418 FBXO31Q5XUX0 539 aaPredicted RBP18.69■□□□□ 0.58
PTK7-201ENST00000230418 CGNL1Q0VF96 1302 aa18.68■□□□□ 0.58
PTK7-201ENST00000230418 ASXL2Q76L83 1435 aa18.68■□□□□ 0.58
PTK7-201ENST00000230418 TEX14Q8IWB6 1497 aa18.68■□□□□ 0.58
PTK7-201ENST00000230418 MTHFSP49914 203 aa18.67■□□□□ 0.58
PTK7-201ENST00000230418 PRAM1Q96QH2 718 aa18.66■□□□□ 0.58
PTK7-201ENST00000230418 ELL2O00472 640 aaPredicted RBP18.65■□□□□ 0.58
PTK7-201ENST00000230418 LRRIQ1Q96JM4 1722 aa18.65■□□□□ 0.58
PTK7-201ENST00000230418 ERCC6L2Q5T890 1561 aa18.65■□□□□ 0.58
PTK7-201ENST00000230418 HDGFP51858 240 aaKnown RBP18.64■□□□□ 0.57
PTK7-201ENST00000230418 IDI1Q13907 227 aa18.64■□□□□ 0.57
PTK7-201ENST00000230418 UPF2Q9HAU5 1272 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms