RNA–Protein interactions for RNA: ENST00000229251.7

COPS7A-201, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-201ENST00000229251 NPATQ14207 1427 aa19.11■□□□□ 0.65
COPS7A-201ENST00000229251 CAMSAP2Q08AD1 1489 aa19.1■□□□□ 0.65
COPS7A-201ENST00000229251 CDC42BPBQ9Y5S2 1711 aa19.08■□□□□ 0.64
COPS7A-201ENST00000229251 ABCC5O15440 1437 aa19.07■□□□□ 0.64
COPS7A-201ENST00000229251 ZNF335Q9H4Z2 1342 aaPredicted RBP19.06■□□□□ 0.64
COPS7A-201ENST00000229251 ABCC1P33527 1531 aa19.05■□□□□ 0.64
COPS7A-201ENST00000229251 KIDINS220Q9ULH0 1771 aa19.05■□□□□ 0.64
COPS7A-201ENST00000229251 PLA2R1Q13018 1463 aa19.05■□□□□ 0.64
COPS7A-201ENST00000229251 ZNF142P52746 1687 aaPredicted RBP19.04■□□□□ 0.64
COPS7A-201ENST00000229251 ADGRL2O95490 1459 aa19.04■□□□□ 0.64
COPS7A-201ENST00000229251 PREX2Q70Z35 1606 aa19.04■□□□□ 0.64
COPS7A-201ENST00000229251 SHANK2Q9UPX8 1470 aa19.03■□□□□ 0.64
COPS7A-201ENST00000229251 PKD2Q13563 968 aa19.03■□□□□ 0.64
COPS7A-201ENST00000229251 CFDP1Q9UEE9 299 aaPredicted RBP19.03■□□□□ 0.64
COPS7A-201ENST00000229251 DIEXFQ68CQ4 756 aaKnown RBP19.03■□□□□ 0.64
COPS7A-201ENST00000229251 MED1Q15648 1581 aaPredicted RBP19.02■□□□□ 0.64
COPS7A-201ENST00000229251 NCKAP5LQ9HCH0 1330 aa19.02■□□□□ 0.64
COPS7A-201ENST00000229251 MYO3AQ8NEV4 1616 aa19■□□□□ 0.63
COPS7A-201ENST00000229251 ARHGEF5Q12774 1597 aa19■□□□□ 0.63
COPS7A-201ENST00000229251 ZMYM3Q14202 1370 aa19■□□□□ 0.63
COPS7A-201ENST00000229251 CEP170BQ9Y4F5 1589 aaPredicted RBP18.98■□□□□ 0.63
COPS7A-201ENST00000229251 RRP7BPQ9NSQ0 103 aa18.95■□□□□ 0.62
COPS7A-201ENST00000229251 CLTCQ00610 1675 aaKnown RBP18.95■□□□□ 0.62
COPS7A-201ENST00000229251 ZNF644Q9H582 1327 aaPredicted RBP18.95■□□□□ 0.62
COPS7A-201ENST00000229251 PPP6R1Q9UPN7 881 aa18.94■□□□□ 0.62
COPS7A-201ENST00000229251 CHIC2Q9UKJ5 165 aa18.94■□□□□ 0.62
COPS7A-201ENST00000229251 SAMD9LQ8IVG5 1584 aa18.93■□□□□ 0.62
COPS7A-201ENST00000229251 HSPA1LP34931 641 aa18.93■□□□□ 0.62
COPS7A-201ENST00000229251 SCAF1Q9H7N4 1312 aaKnown RBP18.92■□□□□ 0.62
COPS7A-201ENST00000229251 ANKRD30AQ9BXX3 1397 aa18.92■□□□□ 0.62
COPS7A-201ENST00000229251 TOM1O60784 492 aa18.91■□□□□ 0.62
COPS7A-201ENST00000229251 CPS1P31327 1500 aa18.91■□□□□ 0.62
COPS7A-201ENST00000229251 PLEKHH2Q8IVE3 1493 aa18.89■□□□□ 0.61
COPS7A-201ENST00000229251 RSPH4AQ5TD94 716 aa18.88■□□□□ 0.61
COPS7A-201ENST00000229251 PHF23Q9BUL5 403 aaPredicted RBP18.88■□□□□ 0.61
COPS7A-201ENST00000229251 PLXNC1O60486 1568 aa18.88■□□□□ 0.61
COPS7A-201ENST00000229251 MAST1Q9Y2H9 1570 aa18.88■□□□□ 0.61
COPS7A-201ENST00000229251 PIP4K2BP78356 416 aa18.88■□□□□ 0.61
COPS7A-201ENST00000229251 SIN3AQ96ST3 1273 aa18.88■□□□□ 0.61
COPS7A-201ENST00000229251 POLR1AO95602 1720 aaPredicted RBP18.88■□□□□ 0.61
COPS7A-201ENST00000229251 CCDC141Q6ZP82 1450 aa18.87■□□□□ 0.61
COPS7A-201ENST00000229251 MBD5Q9P267 1494 aa18.87■□□□□ 0.61
COPS7A-201ENST00000229251 SPAG9O60271 1321 aaKnown RBP18.87■□□□□ 0.61
COPS7A-201ENST00000229251 TONSLQ96HA7 1378 aa18.87■□□□□ 0.61
COPS7A-201ENST00000229251 A2ML1A8K2U0 1454 aa18.86■□□□□ 0.61
COPS7A-201ENST00000229251 ATP7AQ04656 1500 aa18.86■□□□□ 0.61
COPS7A-201ENST00000229251 SYCP2Q9BX26 1530 aa18.85■□□□□ 0.61
COPS7A-201ENST00000229251 A2MP01023 1474 aa18.84■□□□□ 0.61
COPS7A-201ENST00000229251 KIAA1107Q9UPP5 1409 aa18.84■□□□□ 0.61
COPS7A-201ENST00000229251 ZNF777Q9ULD5 760 aaPredicted RBP18.84■□□□□ 0.61
COPS7A-201ENST00000229251 INO80Q9ULG1 1556 aaPredicted RBP18.84■□□□□ 0.61
COPS7A-201ENST00000229251 NEUROD1Q13562 356 aa18.83■□□□□ 0.61
COPS7A-201ENST00000229251 PPP1R15AO75807 674 aaPredicted RBP18.83■□□□□ 0.6
COPS7A-201ENST00000229251 MPHOSPH9Q99550 1183 aa18.83■□□□□ 0.6
COPS7A-201ENST00000229251 KDM5DQ9BY66 1539 aa18.82■□□□□ 0.6
COPS7A-201ENST00000229251 TRIM52Q96A61 297 aa18.82■□□□□ 0.6
COPS7A-201ENST00000229251 ANKRD50Q9ULJ7 1429 aa18.81■□□□□ 0.6
COPS7A-201ENST00000229251 GGT6Q6P531 493 aa18.8■□□□□ 0.6
COPS7A-201ENST00000229251 NEURL4Q96JN8 1562 aa18.8■□□□□ 0.6
COPS7A-201ENST00000229251 TSPY4P0CV99 314 aa18.8■□□□□ 0.6
COPS7A-201ENST00000229251 TSPY10P0CW01 314 aa18.8■□□□□ 0.6
COPS7A-201ENST00000229251 PZPP20742 1482 aa18.79■□□□□ 0.6
COPS7A-201ENST00000229251 HNRNPMP52272 730 aaKnown RBP eCLIP18.77■□□□□ 0.59
COPS7A-201ENST00000229251 ANKRD30BQ9BXX2 1392 aa18.77■□□□□ 0.59
COPS7A-201ENST00000229251 RPRD2Q5VT52 1461 aaKnown RBP18.76■□□□□ 0.59
COPS7A-201ENST00000229251 VWDEQ8N2E2 1590 aa18.75■□□□□ 0.59
COPS7A-201ENST00000229251 KIF15Q9NS87 1388 aa18.75■□□□□ 0.59
COPS7A-201ENST00000229251 ALKQ9UM73 1620 aa18.74■□□□□ 0.59
COPS7A-201ENST00000229251 TNRQ92752 1358 aa18.72■□□□□ 0.59
COPS7A-201ENST00000229251 ANKLE2Q86XL3 938 aa18.71■□□□□ 0.59
COPS7A-201ENST00000229251 SLC4A1APQ9BWU0 796 aaKnown RBP18.71■□□□□ 0.59
COPS7A-201ENST00000229251 UNC13BO14795 1591 aa18.71■□□□□ 0.59
COPS7A-201ENST00000229251 DEPDC5O75140 1603 aa18.71■□□□□ 0.59
COPS7A-201ENST00000229251 FAM135AQ9P2D6 1515 aa18.71■□□□□ 0.59
COPS7A-201ENST00000229251 MED14O60244 1454 aa18.69■□□□□ 0.58
COPS7A-201ENST00000229251 RNF17Q9BXT8 1623 aaKnown RBP18.68■□□□□ 0.58
COPS7A-201ENST00000229251 NPHP4O75161 1426 aaPredicted RBP18.68■□□□□ 0.58
COPS7A-201ENST00000229251 DUOX2Q9NRD8 1548 aa18.67■□□□□ 0.58
COPS7A-201ENST00000229251 THEMISQ8N1K5 641 aaPredicted RBP18.67■□□□□ 0.58
COPS7A-201ENST00000229251 SYNMO15061 1565 aa18.67■□□□□ 0.58
COPS7A-201ENST00000229251 NLRP1Q9C000 1473 aa18.66■□□□□ 0.58
COPS7A-201ENST00000229251 IQGAP1P46940 1657 aa18.66■□□□□ 0.58
COPS7A-201ENST00000229251 UGGT1Q9NYU2 1555 aa18.65■□□□□ 0.58
COPS7A-201ENST00000229251 RTEL1-TNFRSF6BF6WH68 1400 aa18.64■□□□□ 0.57
COPS7A-201ENST00000229251 ERBINQ96RT1 1412 aa18.64■□□□□ 0.57
COPS7A-201ENST00000229251 DHX29Q7Z478 1369 aaKnown RBP18.64■□□□□ 0.57
COPS7A-201ENST00000229251 FBXO31Q5XUX0 539 aaPredicted RBP18.63■□□□□ 0.57
COPS7A-201ENST00000229251 IQGAP3Q86VI3 1631 aa18.63■□□□□ 0.57
COPS7A-201ENST00000229251 LRRC7Q96NW7 1537 aa18.63■□□□□ 0.57
COPS7A-201ENST00000229251 NUP155O75694 1391 aa18.62■□□□□ 0.57
COPS7A-201ENST00000229251 STRCP1A6NGW2 1772 aa18.62■□□□□ 0.57
COPS7A-201ENST00000229251 MIER1Q8N108 512 aa18.61■□□□□ 0.57
COPS7A-201ENST00000229251 SENP3Q9H4L4 574 aaPredicted RBP18.6■□□□□ 0.57
COPS7A-201ENST00000229251 RGS17Q9UGC6 210 aaPredicted RBP18.6■□□□□ 0.57
COPS7A-201ENST00000229251 KIF3BO15066 747 aa18.58■□□□□ 0.57
COPS7A-201ENST00000229251 WASHC2CQ9Y4E1 1318 aa18.58■□□□□ 0.56
COPS7A-201ENST00000229251 CENPBP07199 599 aaPredicted RBP18.57■□□□□ 0.56
COPS7A-201ENST00000229251 FOXD1Q16676 465 aa18.57■□□□□ 0.56
COPS7A-201ENST00000229251 L3MBTL2Q969R5 705 aa18.57■□□□□ 0.56
COPS7A-201ENST00000229251 PELP1Q8IZL8 1130 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms