RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 ZNF518AQ6AHZ1 1483 aa23.76■■□□□ 1.39
GAPDH-201ENST00000229239 KIF15Q9NS87 1388 aa23.75■■□□□ 1.39
GAPDH-201ENST00000229239 SIGLEC1Q9BZZ2 1709 aa23.75■■□□□ 1.39
GAPDH-201ENST00000229239 HNRNPMP52272 730 aaKnown RBP eCLIP23.73■■□□□ 1.39
GAPDH-201ENST00000229239 KDM5CP41229 1560 aa23.73■■□□□ 1.39
GAPDH-201ENST00000229239 EIF4G2P78344 907 aaKnown RBP eCLIP23.72■■□□□ 1.39
GAPDH-201ENST00000229239 ARHGEF12Q9NZN5 1544 aa23.71■■□□□ 1.39
GAPDH-201ENST00000229239 MYT1LQ9UL68 1186 aa23.7■■□□□ 1.39
GAPDH-201ENST00000229239 ABCC1P33527 1531 aa23.7■■□□□ 1.38
GAPDH-201ENST00000229239 TRAPPC8Q9Y2L5 1435 aa23.7■■□□□ 1.38
GAPDH-201ENST00000229239 NUP155O75694 1391 aa23.7■■□□□ 1.38
GAPDH-201ENST00000229239 CCER2I3L3R5 266 aa23.69■■□□□ 1.38
GAPDH-201ENST00000229239 SYCP2Q9BX26 1530 aa23.69■■□□□ 1.38
GAPDH-201ENST00000229239 PKD2Q13563 968 aa23.68■■□□□ 1.38
GAPDH-201ENST00000229239 HIRIP3Q9BW71 556 aaPredicted RBP23.68■■□□□ 1.38
GAPDH-201ENST00000229239 MADDQ8WXG6 1647 aa23.68■■□□□ 1.38
GAPDH-201ENST00000229239 PLXNC1O60486 1568 aa23.67■■□□□ 1.38
GAPDH-201ENST00000229239 ANP32CO43423 234 aa23.66■■□□□ 1.38
GAPDH-201ENST00000229239 HSPA5P11021 654 aaKnown RBP23.66■■□□□ 1.38
GAPDH-201ENST00000229239 ATP10AO60312 1499 aa23.66■■□□□ 1.38
GAPDH-201ENST00000229239 PTPRMP28827 1452 aa23.65■■□□□ 1.38
GAPDH-201ENST00000229239 HECW2Q9P2P5 1572 aa23.64■■□□□ 1.38
GAPDH-201ENST00000229239 MLH3Q9UHC1 1453 aa23.64■■□□□ 1.38
GAPDH-201ENST00000229239 UNC13BO14795 1591 aa23.6■■□□□ 1.37
GAPDH-201ENST00000229239 DIP2CQ9Y2E4 1556 aa23.6■■□□□ 1.37
GAPDH-201ENST00000229239 NBPF8Q3BBV2 869 aa23.6■■□□□ 1.37
GAPDH-201ENST00000229239 RIMS1Q86UR5 1692 aaKnown RBP23.59■■□□□ 1.37
GAPDH-201ENST00000229239 MLECQ14165 292 aa23.59■■□□□ 1.37
GAPDH-201ENST00000229239 ABCA6Q8N139 1617 aa23.59■■□□□ 1.37
GAPDH-201ENST00000229239 SPAG9O60271 1321 aaKnown RBP23.58■■□□□ 1.37
GAPDH-201ENST00000229239 DUOX2Q9NRD8 1548 aa23.58■■□□□ 1.36
GAPDH-201ENST00000229239 FAM135AQ9P2D6 1515 aa23.58■■□□□ 1.36
GAPDH-201ENST00000229239 REREQ9P2R6 1566 aa23.57■■□□□ 1.36
GAPDH-201ENST00000229239 UHRF1BP1Q6BDS2 1440 aa23.57■■□□□ 1.36
GAPDH-201ENST00000229239 SPATA31E1Q6ZUB1 1445 aa23.57■■□□□ 1.36
GAPDH-201ENST00000229239 KIDINS220Q9ULH0 1771 aa23.57■■□□□ 1.36
GAPDH-201ENST00000229239 WASHC2AQ641Q2 1341 aa23.56■■□□□ 1.36
GAPDH-201ENST00000229239 ERBINQ96RT1 1412 aa23.55■■□□□ 1.36
GAPDH-201ENST00000229239 FER1L4A9Z1Z3 1794 aa23.54■■□□□ 1.36
GAPDH-201ENST00000229239 CCDC7Q96M83 1385 aa23.51■■□□□ 1.35
GAPDH-201ENST00000229239 CNTLNQ9NXG0 1405 aa23.5■■□□□ 1.35
GAPDH-201ENST00000229239 IQGAP3Q86VI3 1631 aa23.5■■□□□ 1.35
GAPDH-201ENST00000229239 POLR1AO95602 1720 aaPredicted RBP23.5■■□□□ 1.35
GAPDH-201ENST00000229239 RTEL1-TNFRSF6BF6WH68 1400 aa23.5■■□□□ 1.35
GAPDH-201ENST00000229239 RALGAPBQ86X10 1494 aa23.48■■□□□ 1.35
GAPDH-201ENST00000229239 AGLP35573 1532 aa23.47■■□□□ 1.35
GAPDH-201ENST00000229239 INO80Q9ULG1 1556 aaPredicted RBP23.46■■□□□ 1.35
GAPDH-201ENST00000229239 ATP7AQ04656 1500 aa23.46■■□□□ 1.35
GAPDH-201ENST00000229239 PLPPR3Q6T4P5 718 aa23.43■■□□□ 1.34
GAPDH-201ENST00000229239 CCDC144AA2RUR9 1427 aa23.42■■□□□ 1.34
GAPDH-201ENST00000229239 USP47Q96K76 1375 aa23.4■■□□□ 1.34
GAPDH-201ENST00000229239 LMTK3Q96Q04 1460 aa23.39■■□□□ 1.34
GAPDH-201ENST00000229239 A2MP01023 1474 aa23.39■■□□□ 1.33
GAPDH-201ENST00000229239 C11orf95C9JLR9 678 aaPredicted RBP23.38■■□□□ 1.33
GAPDH-201ENST00000229239 ESF1Q9H501 851 aaKnown RBP23.38■■□□□ 1.33
GAPDH-201ENST00000229239 KIF7Q2M1P5 1343 aa23.37■■□□□ 1.33
GAPDH-201ENST00000229239 PELP1Q8IZL8 1130 aaKnown RBP23.36■■□□□ 1.33
GAPDH-201ENST00000229239 PLA2R1Q13018 1463 aa23.35■■□□□ 1.33
GAPDH-201ENST00000229239 CEBPAP49715 358 aaPredicted RBP23.34■■□□□ 1.33
GAPDH-201ENST00000229239 DHX29Q7Z478 1369 aaKnown RBP23.33■■□□□ 1.33
GAPDH-201ENST00000229239 ZNF326Q5BKZ1 582 aaKnown RBP23.32■■□□□ 1.32
GAPDH-201ENST00000229239 GGT6Q6P531 493 aa23.31■■□□□ 1.32
GAPDH-201ENST00000229239 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.31■■□□□ 1.32
GAPDH-201ENST00000229239 C3P01024 1663 aa23.31■■□□□ 1.32
GAPDH-201ENST00000229239 ROCK2O75116 1388 aaKnown RBP23.31■■□□□ 1.32
GAPDH-201ENST00000229239 DCAF11Q8TEB1 546 aa23.3■■□□□ 1.32
GAPDH-201ENST00000229239 DEPDC5O75140 1603 aa23.3■■□□□ 1.32
GAPDH-201ENST00000229239 SETD1BQ9UPS6 1966 aaKnown RBP23.29■■□□□ 1.32
GAPDH-201ENST00000229239 PRAG1Q86YV5 1406 aa23.29■■□□□ 1.32
GAPDH-201ENST00000229239 CARD11Q9BXL7 1154 aa23.29■■□□□ 1.32
GAPDH-201ENST00000229239 PREX1Q8TCU6 1659 aa23.28■■□□□ 1.32
GAPDH-201ENST00000229239 PRKRIP1Q9H875 184 aaPredicted RBP23.26■■□□□ 1.31
GAPDH-201ENST00000229239 EIF2AK4Q9P2K8 1649 aaKnown RBP23.26■■□□□ 1.31
GAPDH-201ENST00000229239 LAMC1P11047 1609 aa23.26■■□□□ 1.31
GAPDH-201ENST00000229239 MROH2AA6NES4 1674 aa23.26■■□□□ 1.31
GAPDH-201ENST00000229239 KIF3BO15066 747 aa23.26■■□□□ 1.31
GAPDH-201ENST00000229239 PPP6R1Q9UPN7 881 aa23.26■■□□□ 1.31
GAPDH-201ENST00000229239 TRPM1Q7Z4N2 1603 aa23.25■■□□□ 1.31
GAPDH-201ENST00000229239 GPRASP1Q5JY77 1395 aa23.24■■□□□ 1.31
GAPDH-201ENST00000229239 KDM2AQ9Y2K7 1162 aa23.24■■□□□ 1.31
GAPDH-201ENST00000229239 VWDEQ8N2E2 1590 aa23.22■■□□□ 1.31
GAPDH-201ENST00000229239 HSPA2P54652 639 aa23.22■■□□□ 1.31
GAPDH-201ENST00000229239 ZMYM3Q14202 1370 aa23.21■■□□□ 1.31
GAPDH-201ENST00000229239 KANK1Q14678 1352 aa23.21■■□□□ 1.31
GAPDH-201ENST00000229239 TRPM2O94759 1503 aa23.21■■□□□ 1.31
GAPDH-201ENST00000229239 TET3O43151 1660 aa23.2■■□□□ 1.31
GAPDH-201ENST00000229239 CLTCQ00610 1675 aaKnown RBP23.2■■□□□ 1.3
GAPDH-201ENST00000229239 PTPRTO14522 1441 aa23.2■■□□□ 1.3
GAPDH-201ENST00000229239 STAC3Q96MF2 364 aa23.19■■□□□ 1.3
GAPDH-201ENST00000229239 E9PCH4 1651 aa23.18■■□□□ 1.3
GAPDH-201ENST00000229239 SUPT16HQ9Y5B9 1047 aaKnown RBP23.17■■□□□ 1.3
GAPDH-201ENST00000229239 PRDM15P57071 1507 aaPredicted RBP23.17■■□□□ 1.3
GAPDH-201ENST00000229239 NEURL4Q96JN8 1562 aa23.15■■□□□ 1.3
GAPDH-201ENST00000229239 ST20-MTHFSA0A0A6YYL1 179 aa23.14■■□□□ 1.29
GAPDH-201ENST00000229239 SPHKAPQ2M3C7 1700 aa23.14■■□□□ 1.29
GAPDH-201ENST00000229239 WASHC2CQ9Y4E1 1318 aa23.13■■□□□ 1.29
GAPDH-201ENST00000229239 RGL3Q3MIN7 710 aa23.13■■□□□ 1.29
GAPDH-201ENST00000229239 NPATQ14207 1427 aa23.13■■□□□ 1.29
GAPDH-201ENST00000229239 CEP152O94986 1710 aa23.1■■□□□ 1.29
GAPDH-201ENST00000229239 KTN1Q86UP2 1357 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms