RNA–Protein interactions for RNA: ENST00000222728.3

HOXA6-201, Transcript of homeobox A6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA6, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6-201ENST00000222728 CLTCQ00610 1675 aaKnown RBP29.9■■■□□ 2.38
HOXA6-201ENST00000222728 MROH1Q8NDA8 1641 aa29.89■■■□□ 2.38
HOXA6-201ENST00000222728 DEPDC5O75140 1603 aa29.88■■■□□ 2.37
HOXA6-201ENST00000222728 CEP152O94986 1710 aa29.86■■■□□ 2.37
HOXA6-201ENST00000222728 NAIPQ13075 1403 aa29.86■■■□□ 2.37
HOXA6-201ENST00000222728 HFM1A2PYH4 1435 aa29.83■■■□□ 2.37
HOXA6-201ENST00000222728 PRDM15P57071 1507 aaPredicted RBP29.81■■■□□ 2.36
HOXA6-201ENST00000222728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.8■■■□□ 2.36
HOXA6-201ENST00000222728 CFAP65Q6ZU64 1925 aaKnown RBP29.8■■■□□ 2.36
HOXA6-201ENST00000222728 MROH2AA6NES4 1674 aa29.79■■■□□ 2.36
HOXA6-201ENST00000222728 C3P01024 1663 aa29.79■■■□□ 2.36
HOXA6-201ENST00000222728 UNC13BO14795 1591 aa29.79■■■□□ 2.36
HOXA6-201ENST00000222728 ESF1Q9H501 851 aaKnown RBP29.79■■■□□ 2.36
HOXA6-201ENST00000222728 KDM5DQ9BY66 1539 aa29.77■■■□□ 2.36
HOXA6-201ENST00000222728 ZC3H13Q5T200 1668 aaKnown RBP29.77■■■□□ 2.36
HOXA6-201ENST00000222728 PTPRMP28827 1452 aa29.77■■■□□ 2.36
HOXA6-201ENST00000222728 PLPPR3Q6T4P5 718 aa29.76■■■□□ 2.35
HOXA6-201ENST00000222728 ABCC3O15438 1527 aa29.75■■■□□ 2.35
HOXA6-201ENST00000222728 WASHC2CQ9Y4E1 1318 aa29.73■■■□□ 2.35
HOXA6-201ENST00000222728 CNTLNQ9NXG0 1405 aa29.73■■■□□ 2.35
HOXA6-201ENST00000222728 FAM135AQ9P2D6 1515 aa29.72■■■□□ 2.35
HOXA6-201ENST00000222728 CAMSAP1Q5T5Y3 1602 aa29.72■■■□□ 2.35
HOXA6-201ENST00000222728 PPP6R1Q9UPN7 881 aa29.72■■■□□ 2.35
HOXA6-201ENST00000222728 VWDEQ8N2E2 1590 aa29.72■■■□□ 2.35
HOXA6-201ENST00000222728 TRIM26Q12899 539 aaPredicted RBP29.7■■■□□ 2.35
HOXA6-201ENST00000222728 KANK1Q14678 1352 aa29.69■■■□□ 2.34
HOXA6-201ENST00000222728 CEBPAP49715 358 aaPredicted RBP29.69■■■□□ 2.34
HOXA6-201ENST00000222728 SETD5Q9C0A6 1442 aa29.68■■■□□ 2.34
HOXA6-201ENST00000222728 IQGAP3Q86VI3 1631 aa29.67■■■□□ 2.34
HOXA6-201ENST00000222728 ZMYM3Q14202 1370 aa29.66■■■□□ 2.34
HOXA6-201ENST00000222728 NUP155O75694 1391 aa29.63■■■□□ 2.33
HOXA6-201ENST00000222728 TET3O43151 1660 aa29.63■■■□□ 2.33
HOXA6-201ENST00000222728 RAB3GAP2Q9H2M9 1393 aa29.61■■■□□ 2.33
HOXA6-201ENST00000222728 SETD1BQ9UPS6 1966 aaKnown RBP29.61■■■□□ 2.33
HOXA6-201ENST00000222728 LMTK2Q8IWU2 1503 aa29.61■■■□□ 2.33
HOXA6-201ENST00000222728 AEBP2Q6ZN18 517 aaPredicted RBP29.59■■■□□ 2.33
HOXA6-201ENST00000222728 TRIM52Q96A61 297 aa29.59■■■□□ 2.33
HOXA6-201ENST00000222728 EFCAB6Q5THR3 1501 aa29.58■■■□□ 2.33
HOXA6-201ENST00000222728 E9PCH4 1651 aa29.56■■■□□ 2.32
HOXA6-201ENST00000222728 PZPP20742 1482 aa29.56■■■□□ 2.32
HOXA6-201ENST00000222728 PREX1Q8TCU6 1659 aa29.56■■■□□ 2.32
HOXA6-201ENST00000222728 FBXO31Q5XUX0 539 aaPredicted RBP29.54■■■□□ 2.32
HOXA6-201ENST00000222728 NPATQ14207 1427 aa29.52■■■□□ 2.32
HOXA6-201ENST00000222728 ARHGAP31Q2M1Z3 1444 aa29.5■■■□□ 2.31
HOXA6-201ENST00000222728 ERVK-7P63135 1459 aa29.48■■■□□ 2.31
HOXA6-201ENST00000222728 SPATA31D1Q6ZQQ2 1576 aa29.47■■■□□ 2.31
HOXA6-201ENST00000222728 MYO3AQ8NEV4 1616 aa29.45■■■□□ 2.31
HOXA6-201ENST00000222728 SPHKAPQ2M3C7 1700 aa29.42■■■□□ 2.3
HOXA6-201ENST00000222728 TNRQ92752 1358 aa29.42■■■□□ 2.3
HOXA6-201ENST00000222728 SLC4A1APQ9BWU0 796 aaKnown RBP29.42■■■□□ 2.3
HOXA6-201ENST00000222728 RPRD2Q5VT52 1461 aaKnown RBP29.42■■■□□ 2.3
HOXA6-201ENST00000222728 PCGF6Q9BYE7 350 aa29.41■■■□□ 2.3
HOXA6-201ENST00000222728 SYNMO15061 1565 aa29.4■■■□□ 2.3
HOXA6-201ENST00000222728 HRCP23327 699 aa29.37■■■□□ 2.29
HOXA6-201ENST00000222728 PKD2Q13563 968 aa29.37■■■□□ 2.29
HOXA6-201ENST00000222728 MPHOSPH9Q99550 1183 aa29.37■■■□□ 2.29
HOXA6-201ENST00000222728 ZNF142P52746 1687 aaPredicted RBP29.37■■■□□ 2.29
HOXA6-201ENST00000222728 NOS1P29475 1434 aa29.36■■■□□ 2.29
HOXA6-201ENST00000222728 UHRF1BP1Q6BDS2 1440 aa29.36■■■□□ 2.29
HOXA6-201ENST00000222728 ACIN1Q9UKV3 1341 aaKnown RBP29.35■■■□□ 2.29
HOXA6-201ENST00000222728 LMTK3Q96Q04 1460 aa29.35■■■□□ 2.29
HOXA6-201ENST00000222728 FOXD1Q16676 465 aa29.34■■■□□ 2.29
HOXA6-201ENST00000222728 CEP170BQ9Y4F5 1589 aaPredicted RBP29.34■■■□□ 2.29
HOXA6-201ENST00000222728 MYO5BQ9ULV0 1848 aa29.31■■■□□ 2.28
HOXA6-201ENST00000222728 UGGT1Q9NYU2 1555 aa29.31■■■□□ 2.28
HOXA6-201ENST00000222728 PIK3C2BO00750 1634 aa29.31■■■□□ 2.28
HOXA6-201ENST00000222728 NLRP1Q9C000 1473 aa29.29■■■□□ 2.28
HOXA6-201ENST00000222728 A2ML1A8K2U0 1454 aa29.28■■■□□ 2.28
HOXA6-201ENST00000222728 UBR1Q8IWV7 1749 aa29.27■■■□□ 2.28
HOXA6-201ENST00000222728 PTPRTO14522 1441 aa29.26■■■□□ 2.27
HOXA6-201ENST00000222728 CLTCL1P53675 1640 aa29.24■■■□□ 2.27
HOXA6-201ENST00000222728 HSPA2P54652 639 aa29.24■■■□□ 2.27
HOXA6-201ENST00000222728 TRPM2O94759 1503 aa29.24■■■□□ 2.27
HOXA6-201ENST00000222728 PLA2R1Q13018 1463 aa29.23■■■□□ 2.27
HOXA6-201ENST00000222728 IDI1Q13907 227 aa29.22■■■□□ 2.27
HOXA6-201ENST00000222728 KIF1BO60333 1816 aa29.22■■■□□ 2.27
HOXA6-201ENST00000222728 ADGRB3O60242 1522 aa29.17■■■□□ 2.26
HOXA6-201ENST00000222728 SLC52A1Q9NWF4 448 aa29.17■■■□□ 2.26
HOXA6-201ENST00000222728 KDM5AP29375 1690 aaKnown RBP29.17■■■□□ 2.26
HOXA6-201ENST00000222728 TMEM131LA2VDJ0 1609 aa29.16■■■□□ 2.26
HOXA6-201ENST00000222728 STAG3Q9UJ98 1225 aa29.14■■■□□ 2.26
HOXA6-201ENST00000222728 STRCQ7RTU9 1775 aa29.13■■■□□ 2.25
HOXA6-201ENST00000222728 CHGAP10645 457 aaKnown RBP29.12■■■□□ 2.25
HOXA6-201ENST00000222728 POLR1AO95602 1720 aaPredicted RBP29.11■■■□□ 2.25
HOXA6-201ENST00000222728 DHX57Q6P158 1386 aaKnown RBP29.1■■■□□ 2.25
HOXA6-201ENST00000222728 THEMISQ8N1K5 641 aaPredicted RBP29.09■■■□□ 2.25
HOXA6-201ENST00000222728 ANKRD30BQ9BXX2 1392 aa29.08■■■□□ 2.25
HOXA6-201ENST00000222728 CCDC144AA2RUR9 1427 aa29.08■■■□□ 2.25
HOXA6-201ENST00000222728 NCKAP5LQ9HCH0 1330 aa29.01■■■□□ 2.23
HOXA6-201ENST00000222728 SLIT1O75093 1534 aa29.01■■■□□ 2.23
HOXA6-201ENST00000222728 ARHGAP23Q9P227 1491 aa29.01■■■□□ 2.23
HOXA6-201ENST00000222728 TMEM2Q9UHN6 1383 aa29■■■□□ 2.23
HOXA6-201ENST00000222728 NEURL4Q96JN8 1562 aa28.98■■■□□ 2.23
HOXA6-201ENST00000222728 ZNF326Q5BKZ1 582 aaKnown RBP28.96■■■□□ 2.23
HOXA6-201ENST00000222728 PPLO60437 1756 aa28.96■■■□□ 2.23
HOXA6-201ENST00000222728 RIMS2Q9UQ26 1411 aa28.95■■■□□ 2.23
HOXA6-201ENST00000222728 ANKLE2Q86XL3 938 aa28.95■■■□□ 2.22
HOXA6-201ENST00000222728 SCAF11Q99590 1463 aaKnown RBP28.94■■■□□ 2.22
HOXA6-201ENST00000222728 LTKP29376 864 aa28.94■■■□□ 2.22
HOXA6-201ENST00000222728 ZFYVE9O95405 1425 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms