RNA–Protein interactions for RNA: ENST00000221899.7

CACTIN-201, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-201ENST00000221899 RALBP1Q15311 655 aa24.82■■□□□ 1.56
CACTIN-201ENST00000221899 ABCC10Q5T3U5 1492 aa24.81■■□□□ 1.56
CACTIN-201ENST00000221899 ANP32AP39687 249 aaKnown RBP24.81■■□□□ 1.56
CACTIN-201ENST00000221899 DEKP35659 375 aaKnown RBP24.8■■□□□ 1.56
CACTIN-201ENST00000221899 SHANK2Q9UPX8 1470 aa24.8■■□□□ 1.56
CACTIN-201ENST00000221899 ATP10BO94823 1461 aa24.79■■□□□ 1.56
CACTIN-201ENST00000221899 RGL3Q3MIN7 710 aa24.79■■□□□ 1.56
CACTIN-201ENST00000221899 RRP1P56182 461 aaKnown RBP24.78■■□□□ 1.56
CACTIN-201ENST00000221899 EXOC6Q8TAG9 804 aa24.78■■□□□ 1.56
CACTIN-201ENST00000221899 IPO9Q96P70 1041 aaKnown RBP24.76■■□□□ 1.55
CACTIN-201ENST00000221899 KDM5DQ9BY66 1539 aa24.75■■□□□ 1.55
CACTIN-201ENST00000221899 NBPF1Q3BBV0 1214 aa24.75■■□□□ 1.55
CACTIN-201ENST00000221899 RCAN3Q9UKA8 241 aa24.75■■□□□ 1.55
CACTIN-201ENST00000221899 ERCC6Q03468 1493 aa24.74■■□□□ 1.55
CACTIN-201ENST00000221899 MYT1LQ9UL68 1186 aa24.74■■□□□ 1.55
CACTIN-201ENST00000221899 ABCA8O94911 1581 aa24.73■■□□□ 1.55
CACTIN-201ENST00000221899 NLRP13Q86W25 1043 aa24.72■■□□□ 1.55
CACTIN-201ENST00000221899 PTPRGP23470 1445 aa24.72■■□□□ 1.55
CACTIN-201ENST00000221899 E9PCH4 1651 aa24.72■■□□□ 1.55
CACTIN-201ENST00000221899 KTN1Q86UP2 1357 aaKnown RBP24.72■■□□□ 1.55
CACTIN-201ENST00000221899 NUP160Q12769 1436 aa24.72■■□□□ 1.55
CACTIN-201ENST00000221899 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.71■■□□□ 1.552e-7■□□□□ 9.2
CACTIN-201ENST00000221899 NPM2Q86SE8 214 aaKnown RBP24.7■■□□□ 1.54
CACTIN-201ENST00000221899 CDCA7LQ96GN5 454 aa24.7■■□□□ 1.54
CACTIN-201ENST00000221899 ZBTB47Q9UFB7 747 aaPredicted RBP24.7■■□□□ 1.54
CACTIN-201ENST00000221899 CC2D1BQ5T0F9 858 aaKnown RBP24.7■■□□□ 1.54
CACTIN-201ENST00000221899 FAM135AQ9P2D6 1515 aa24.69■■□□□ 1.54
CACTIN-201ENST00000221899 CCDC144AA2RUR9 1427 aa24.68■■□□□ 1.54
CACTIN-201ENST00000221899 PARD3Q8TEW0 1356 aa24.68■■□□□ 1.54
CACTIN-201ENST00000221899 PRAG1Q86YV5 1406 aa24.67■■□□□ 1.54
CACTIN-201ENST00000221899 PER1O15534 1290 aaPredicted RBP24.65■■□□□ 1.54
CACTIN-201ENST00000221899 TRPM1Q7Z4N2 1603 aa24.63■■□□□ 1.53
CACTIN-201ENST00000221899 CCDC141Q6ZP82 1450 aa24.63■■□□□ 1.53
CACTIN-201ENST00000221899 PLIN1O60240 522 aa24.63■■□□□ 1.53
CACTIN-201ENST00000221899 ARHGEF5Q12774 1597 aa24.63■■□□□ 1.53
CACTIN-201ENST00000221899 SAMD9LQ8IVG5 1584 aa24.62■■□□□ 1.53
CACTIN-201ENST00000221899 DISP3Q9P2K9 1392 aa24.62■■□□□ 1.53
CACTIN-201ENST00000221899 PDE3BQ13370 1112 aa24.59■■□□□ 1.53
CACTIN-201ENST00000221899 PANK3Q9H999 370 aa24.59■■□□□ 1.53
CACTIN-201ENST00000221899 A2MP01023 1474 aa24.58■■□□□ 1.52
CACTIN-201ENST00000221899 PLA2R1Q13018 1463 aa24.58■■□□□ 1.52
CACTIN-201ENST00000221899 TCERG1O14776 1098 aaKnown RBP24.57■■□□□ 1.52
CACTIN-201ENST00000221899 TESK2Q96S53 571 aa24.57■■□□□ 1.52
CACTIN-201ENST00000221899 CDC42BPBQ9Y5S2 1711 aa24.56■■□□□ 1.52
CACTIN-201ENST00000221899 PDE4AP27815 886 aa24.56■■□□□ 1.52
CACTIN-201ENST00000221899 RTL5Q5HYW3 569 aaPredicted RBP24.56■■□□□ 1.52
CACTIN-201ENST00000221899 SKAP1Q86WV1 359 aa24.56■■□□□ 1.52
CACTIN-201ENST00000221899 COL17A1Q9UMD9 1497 aaPredicted RBP24.55■■□□□ 1.52
CACTIN-201ENST00000221899 SYCP2Q9BX26 1530 aa24.54■■□□□ 1.52
CACTIN-201ENST00000221899 GPRASP1Q5JY77 1395 aa24.52■■□□□ 1.52
CACTIN-201ENST00000221899 PREX2Q70Z35 1606 aa24.51■■□□□ 1.51
CACTIN-201ENST00000221899 ERBINQ96RT1 1412 aa24.51■■□□□ 1.51
CACTIN-201ENST00000221899 CRBNQ96SW2 442 aa24.51■■□□□ 1.51
CACTIN-201ENST00000221899 RSPH4AQ5TD94 716 aa24.5■■□□□ 1.51
CACTIN-201ENST00000221899 BACH2Q9BYV9 841 aa24.49■■□□□ 1.51
CACTIN-201ENST00000221899 ARHGAP5Q13017 1502 aa24.49■■□□□ 1.51
CACTIN-201ENST00000221899 TMF1P82094 1093 aa24.48■■□□□ 1.51
CACTIN-201ENST00000221899 PRDM15P57071 1507 aaPredicted RBP24.48■■□□□ 1.51
CACTIN-201ENST00000221899 PLEKHH2Q8IVE3 1493 aa24.48■■□□□ 1.51
CACTIN-201ENST00000221899 LAS1LQ9Y4W2 734 aaKnown RBP24.48■■□□□ 1.51
CACTIN-201ENST00000221899 BLMP54132 1417 aaPredicted RBP24.47■■□□□ 1.51
CACTIN-201ENST00000221899 WASHC2CQ9Y4E1 1318 aa24.45■■□□□ 1.5
CACTIN-201ENST00000221899 C20orf194Q5TEA3 1177 aa24.45■■□□□ 1.5
CACTIN-201ENST00000221899 MYO5CQ9NQX4 1742 aa24.45■■□□□ 1.5
CACTIN-201ENST00000221899 ADAMTS8Q9UP79 889 aa24.45■■□□□ 1.5
CACTIN-201ENST00000221899 UNC13BO14795 1591 aa24.44■■□□□ 1.5
CACTIN-201ENST00000221899 TTC37Q6PGP7 1564 aa24.44■■□□□ 1.5
CACTIN-201ENST00000221899 MS4A1P11836 297 aa24.42■■□□□ 1.5
CACTIN-201ENST00000221899 LAMC1P11047 1609 aa24.39■■□□□ 1.49
CACTIN-201ENST00000221899 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.38■■□□□ 1.49
CACTIN-201ENST00000221899 ZMYM4Q5VZL5 1548 aa24.37■■□□□ 1.49
CACTIN-201ENST00000221899 IQGAP3Q86VI3 1631 aa24.37■■□□□ 1.49
CACTIN-201ENST00000221899 EIF2AK4Q9P2K8 1649 aaKnown RBP24.37■■□□□ 1.49
CACTIN-201ENST00000221899 KNSTRNQ9Y448 316 aa24.36■■□□□ 1.49
CACTIN-201ENST00000221899 MAST1Q9Y2H9 1570 aa24.36■■□□□ 1.49
CACTIN-201ENST00000221899 NEFMP07197 916 aa24.36■■□□□ 1.49
CACTIN-201ENST00000221899 MAGI2Q86UL8 1455 aa24.35■■□□□ 1.49
CACTIN-201ENST00000221899 WDR43Q15061 677 aaKnown RBP eCLIP24.35■■□□□ 1.49
CACTIN-201ENST00000221899 PPP2R1AP30153 589 aa24.34■■□□□ 1.49
CACTIN-201ENST00000221899 PLEKHH1Q9ULM0 1364 aa24.34■■□□□ 1.49
CACTIN-201ENST00000221899 INSRP06213 1382 aa24.33■■□□□ 1.49
CACTIN-201ENST00000221899 PLXNC1O60486 1568 aa24.31■■□□□ 1.48
CACTIN-201ENST00000221899 WDR7Q9Y4E6 1490 aa24.31■■□□□ 1.48
CACTIN-201ENST00000221899 DUOX2Q9NRD8 1548 aa24.3■■□□□ 1.48
CACTIN-201ENST00000221899 DUSP27Q5VZP5 1158 aa24.3■■□□□ 1.48
CACTIN-201ENST00000221899 AMER1Q5JTC6 1135 aaPredicted RBP24.27■■□□□ 1.48
CACTIN-201ENST00000221899 CCDC146Q8IYE0 955 aa24.27■■□□□ 1.48
CACTIN-201ENST00000221899 ATP10AO60312 1499 aa24.27■■□□□ 1.48
CACTIN-201ENST00000221899 RNF17Q9BXT8 1623 aaKnown RBP24.26■■□□□ 1.47
CACTIN-201ENST00000221899 KDM2BQ8NHM5 1336 aa24.25■■□□□ 1.47
CACTIN-201ENST00000221899 SLC4A3P48751 1232 aa24.25■■□□□ 1.47
CACTIN-201ENST00000221899 GOLGA2Q08379 1002 aa24.25■■□□□ 1.47
CACTIN-201ENST00000221899 ERCC6L2Q5T890 1561 aa24.21■■□□□ 1.47
CACTIN-201ENST00000221899 MADDQ8WXG6 1647 aa24.21■■□□□ 1.47
CACTIN-201ENST00000221899 ZNF521Q96K83 1311 aa24.21■■□□□ 1.47
CACTIN-201ENST00000221899 CENPQQ7L2Z9 268 aaPredicted RBP24.2■■□□□ 1.47
CACTIN-201ENST00000221899 TRAPPC8Q9Y2L5 1435 aa24.2■■□□□ 1.46
CACTIN-201ENST00000221899 DDRGK1Q96HY6 314 aa24.2■■□□□ 1.46
CACTIN-201ENST00000221899 PPM1GO15355 546 aaPredicted RBP24.2■■□□□ 1.46
CACTIN-201ENST00000221899 EFCAB2Q5VUJ9 269 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms