RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 ZBED9Q6R2W3 1325 aa21.81■■□□□ 1.08
SF3A2-201ENST00000221494 SPAG9O60271 1321 aaKnown RBP21.8■■□□□ 1.08
SF3A2-201ENST00000221494 RTEL1-TNFRSF6BF6WH68 1400 aa21.79■■□□□ 1.08
SF3A2-201ENST00000221494 PLXNC1O60486 1568 aa21.78■■□□□ 1.08
SF3A2-201ENST00000221494 SLC4A1APQ9BWU0 796 aaKnown RBP21.78■■□□□ 1.08
SF3A2-201ENST00000221494 PZPP20742 1482 aa21.78■■□□□ 1.08
SF3A2-201ENST00000221494 CCDC7Q96M83 1385 aa21.78■■□□□ 1.08
SF3A2-201ENST00000221494 GLI2P10070 1586 aa21.77■■□□□ 1.08
SF3A2-201ENST00000221494 FAM69CQ0P6D2 419 aa21.74■■□□□ 1.07
SF3A2-201ENST00000221494 FOXD1Q16676 465 aa21.74■■□□□ 1.07
SF3A2-201ENST00000221494 NUP155O75694 1391 aa21.74■■□□□ 1.07
SF3A2-201ENST00000221494 RPRD2Q5VT52 1461 aaKnown RBP21.74■■□□□ 1.07
SF3A2-201ENST00000221494 PRKRIP1Q9H875 184 aaPredicted RBP21.74■■□□□ 1.07
SF3A2-201ENST00000221494 ZFYVE16Q7Z3T8 1539 aa21.73■■□□□ 1.07
SF3A2-201ENST00000221494 NEO1Q92859 1461 aa21.73■■□□□ 1.07
SF3A2-201ENST00000221494 DUOX2Q9NRD8 1548 aa21.73■■□□□ 1.07
SF3A2-201ENST00000221494 ANKRD30BQ9BXX2 1392 aa21.71■■□□□ 1.07
SF3A2-201ENST00000221494 MAP3K4Q9Y6R4 1608 aa21.71■■□□□ 1.07
SF3A2-201ENST00000221494 CFAP74Q9C0B2 1584 aa21.71■■□□□ 1.07
SF3A2-201ENST00000221494 TEX14Q8IWB6 1497 aa21.71■■□□□ 1.07
SF3A2-201ENST00000221494 ERBINQ96RT1 1412 aa21.7■■□□□ 1.06
SF3A2-201ENST00000221494 DIP2BQ9P265 1576 aa21.7■■□□□ 1.06
SF3A2-201ENST00000221494 KDM5DQ9BY66 1539 aa21.7■■□□□ 1.06
SF3A2-201ENST00000221494 ZNF518AQ6AHZ1 1483 aa21.7■■□□□ 1.06
SF3A2-201ENST00000221494 SPATA31E1Q6ZUB1 1445 aa21.69■■□□□ 1.06
SF3A2-201ENST00000221494 POGZQ7Z3K3 1410 aa21.68■■□□□ 1.06
SF3A2-201ENST00000221494 PKD2Q13563 968 aa21.68■■□□□ 1.06
SF3A2-201ENST00000221494 ATP7AQ04656 1500 aa21.68■■□□□ 1.06
SF3A2-201ENST00000221494 INO80Q9ULG1 1556 aaPredicted RBP21.67■■□□□ 1.06
SF3A2-201ENST00000221494 SMG6Q86US8 1419 aaKnown RBP21.67■■□□□ 1.06
SF3A2-201ENST00000221494 RAPGEF3O95398 923 aa21.63■■□□□ 1.05
SF3A2-201ENST00000221494 KDM5CP41229 1560 aa21.63■■□□□ 1.05
SF3A2-201ENST00000221494 L3MBTL2Q969R5 705 aa21.62■■□□□ 1.05
SF3A2-201ENST00000221494 MRS2Q9HD23 443 aa21.62■■□□□ 1.05
SF3A2-201ENST00000221494 MLH3Q9UHC1 1453 aa21.62■■□□□ 1.05
SF3A2-201ENST00000221494 UNC13BO14795 1591 aa21.61■■□□□ 1.05
SF3A2-201ENST00000221494 DHX29Q7Z478 1369 aaKnown RBP21.61■■□□□ 1.05
SF3A2-201ENST00000221494 IRX6P78412 446 aaPredicted RBP21.61■■□□□ 1.05
SF3A2-201ENST00000221494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.61■■□□□ 1.051e-6■□□□□ 10
SF3A2-201ENST00000221494 FAM135AQ9P2D6 1515 aa21.61■■□□□ 1.05
SF3A2-201ENST00000221494 ARID4BQ4LE39 1312 aaPredicted RBP21.61■■□□□ 1.05
SF3A2-201ENST00000221494 RNF123Q5XPI4 1314 aa21.6■■□□□ 1.05
SF3A2-201ENST00000221494 MAGI2Q86UL8 1455 aa21.6■■□□□ 1.05
SF3A2-201ENST00000221494 KIDINS220Q9ULH0 1771 aa21.58■■□□□ 1.05
SF3A2-201ENST00000221494 EIF5BO60841 1220 aaKnown RBP21.58■■□□□ 1.05
SF3A2-201ENST00000221494 CCDC184Q52MB2 194 aa21.56■■□□□ 1.04
SF3A2-201ENST00000221494 KIF7Q2M1P5 1343 aa21.55■■□□□ 1.04
SF3A2-201ENST00000221494 KIF3BO15066 747 aa21.54■■□□□ 1.04
SF3A2-201ENST00000221494 C11orf95C9JLR9 678 aaPredicted RBP21.53■■□□□ 1.04
SF3A2-201ENST00000221494 IQGAP3Q86VI3 1631 aa21.53■■□□□ 1.04
SF3A2-201ENST00000221494 HECW2Q9P2P5 1572 aa21.53■■□□□ 1.04
SF3A2-201ENST00000221494 A2MP01023 1474 aa21.52■■□□□ 1.04
SF3A2-201ENST00000221494 FAM9BQ8IZU0 186 aa21.52■■□□□ 1.04
SF3A2-201ENST00000221494 PPRC1Q5VV67 1664 aaKnown RBP21.52■■□□□ 1.04
SF3A2-201ENST00000221494 NOP58Q9Y2X3 529 aaKnown RBP21.51■■□□□ 1.03
SF3A2-201ENST00000221494 NUDCQ9Y266 331 aa21.5■■□□□ 1.03
SF3A2-201ENST00000221494 ROCK2O75116 1388 aaKnown RBP21.5■■□□□ 1.03
SF3A2-201ENST00000221494 B4GALNT3Q6L9W6 998 aa21.49■■□□□ 1.03
SF3A2-201ENST00000221494 RICTORQ6R327 1708 aa21.49■■□□□ 1.03
SF3A2-201ENST00000221494 NBPF8Q3BBV2 869 aa21.48■■□□□ 1.03
SF3A2-201ENST00000221494 DEPDC5O75140 1603 aa21.48■■□□□ 1.03
SF3A2-201ENST00000221494 EIF2AK4Q9P2K8 1649 aaKnown RBP21.47■■□□□ 1.03
SF3A2-201ENST00000221494 FRMPD1Q5SYB0 1578 aa21.47■■□□□ 1.03
SF3A2-201ENST00000221494 KTN1Q86UP2 1357 aaKnown RBP21.47■■□□□ 1.03
SF3A2-201ENST00000221494 KIF13AQ9H1H9 1805 aa21.46■■□□□ 1.03
SF3A2-201ENST00000221494 PLA2R1Q13018 1463 aa21.46■■□□□ 1.03
SF3A2-201ENST00000221494 ABCA6Q8N139 1617 aa21.45■■□□□ 1.02
SF3A2-201ENST00000221494 VWDEQ8N2E2 1590 aa21.45■■□□□ 1.02
SF3A2-201ENST00000221494 TSPOAP1O95153 1857 aa21.44■■□□□ 1.02
SF3A2-201ENST00000221494 YEATS2Q9ULM3 1422 aa21.44■■□□□ 1.02
SF3A2-201ENST00000221494 KANK1Q14678 1352 aa21.44■■□□□ 1.02
SF3A2-201ENST00000221494 BCORL1Q5H9F3 1711 aa21.43■■□□□ 1.02
SF3A2-201ENST00000221494 DNAJC5Q9H3Z4 198 aa21.43■■□□□ 1.02
SF3A2-201ENST00000221494 MROH1Q8NDA8 1641 aa21.43■■□□□ 1.02
SF3A2-201ENST00000221494 PRDM15P57071 1507 aaPredicted RBP21.42■■□□□ 1.02
SF3A2-201ENST00000221494 ZMYM4Q5VZL5 1548 aa21.42■■□□□ 1.02
SF3A2-201ENST00000221494 DIP2CQ9Y2E4 1556 aa21.42■■□□□ 1.02
SF3A2-201ENST00000221494 DEKP35659 375 aaKnown RBP21.42■■□□□ 1.02
SF3A2-201ENST00000221494 UHRF1BP1Q6BDS2 1440 aa21.42■■□□□ 1.02
SF3A2-201ENST00000221494 ATP10AO60312 1499 aa21.42■■□□□ 1.02
SF3A2-201ENST00000221494 COL17A1Q9UMD9 1497 aaPredicted RBP21.41■■□□□ 1.02
SF3A2-201ENST00000221494 ANP32AP39687 249 aaKnown RBP21.39■■□□□ 1.02
SF3A2-201ENST00000221494 RALGAPBQ86X10 1494 aa21.39■■□□□ 1.01
SF3A2-201ENST00000221494 CCDC144AA2RUR9 1427 aa21.38■■□□□ 1.01
SF3A2-201ENST00000221494 USP47Q96K76 1375 aa21.38■■□□□ 1.01
SF3A2-201ENST00000221494 IPO9Q96P70 1041 aaKnown RBP21.37■■□□□ 1.01
SF3A2-201ENST00000221494 RNF17Q9BXT8 1623 aaKnown RBP21.37■■□□□ 1.01
SF3A2-201ENST00000221494 GGT6Q6P531 493 aa21.37■■□□□ 1.01
SF3A2-201ENST00000221494 E9PCH4 1651 aa21.36■■□□□ 1.01
SF3A2-201ENST00000221494 CCDC136Q96JN2 1154 aa21.36■■□□□ 1.01
SF3A2-201ENST00000221494 LRPPRCP42704 1394 aaKnown RBP21.35■■□□□ 1.01
SF3A2-201ENST00000221494 PTPRTO14522 1441 aa21.34■■□□□ 1.01
SF3A2-201ENST00000221494 LMTK2Q8IWU2 1503 aa21.34■■□□□ 1.01
SF3A2-201ENST00000221494 TET3O43151 1660 aa21.34■■□□□ 1.01
SF3A2-201ENST00000221494 BRD4O60885 1362 aaPredicted RBP21.32■■□□□ 1
SF3A2-201ENST00000221494 PNISRQ8TF01 805 aaKnown RBP21.3■■□□□ 1
SF3A2-201ENST00000221494 WASHC2CQ9Y4E1 1318 aa21.29■■□□□ 1
SF3A2-201ENST00000221494 EFCAB6Q5THR3 1501 aa21.29■■□□□ 1
SF3A2-201ENST00000221494 INSRP06213 1382 aa21.29■■□□□ 1
SF3A2-201ENST00000221494 TRPM2O94759 1503 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms