RNA–Protein interactions for RNA: ENST00000220959.8

UBR5-201, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBR5, Length 9,418 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-201ENST00000220959 FAM184AQ8NB25 1140 aa18.41■□□□□ 0.54
UBR5-201ENST00000220959 TRIM34Q9BYJ4 488 aa18.41■□□□□ 0.54
UBR5-201ENST00000220959 FOXD4L1Q9NU39 408 aa18.4■□□□□ 0.54
UBR5-201ENST00000220959 EIF3AQ14152 1382 aaKnown RBP18.4■□□□□ 0.54
UBR5-201ENST00000220959 SETQ01105 290 aaPredicted RBP18.4■□□□□ 0.54
UBR5-201ENST00000220959 TNIKQ9UKE5 1360 aa18.4■□□□□ 0.54
UBR5-201ENST00000220959 TIMELESSQ9UNS1 1208 aa18.4■□□□□ 0.54
UBR5-201ENST00000220959 CNKSR2Q8WXI2 1034 aa18.4■□□□□ 0.54
UBR5-201ENST00000220959 CHMP4CQ96CF2 233 aa18.39■□□□□ 0.53
UBR5-201ENST00000220959 TPM1P09493 284 aa18.39■□□□□ 0.53
UBR5-201ENST00000220959 MSH5O43196 834 aa18.39■□□□□ 0.53
UBR5-201ENST00000220959 EVA1CP58658 441 aa18.39■□□□□ 0.53
UBR5-201ENST00000220959 AMOTL1Q8IY63 956 aa18.39■□□□□ 0.53
UBR5-201ENST00000220959 NOL10Q9BSC4 688 aaKnown RBP18.38■□□□□ 0.53
UBR5-201ENST00000220959 GOLGA6L19H0YKK7 550 aa18.38■□□□□ 0.53
UBR5-201ENST00000220959 SYNE3Q6ZMZ3 975 aa18.38■□□□□ 0.53
UBR5-201ENST00000220959 FBXO3Q9UK99 471 aa18.37■□□□□ 0.53
UBR5-201ENST00000220959 RBM19Q9Y4C8 960 aaKnown RBP18.37■□□□□ 0.53
UBR5-201ENST00000220959 CCDC70Q6NSX1 233 aa18.37■□□□□ 0.53
UBR5-201ENST00000220959 CCDC180Q9P1Z9 1646 aa18.37■□□□□ 0.53
UBR5-201ENST00000220959 RAD21O60216 631 aa18.36■□□□□ 0.53
UBR5-201ENST00000220959 FOXD4L5Q5VV16 416 aaPredicted RBP18.35■□□□□ 0.53
UBR5-201ENST00000220959 FOXD4L4Q8WXT5 416 aaPredicted RBP18.35■□□□□ 0.53
UBR5-201ENST00000220959 RILPL2Q969X0 211 aa18.35■□□□□ 0.53
UBR5-201ENST00000220959 CLUAP1Q96AJ1 413 aa18.35■□□□□ 0.53
UBR5-201ENST00000220959 CCAR2Q8N163 923 aaKnown RBP18.35■□□□□ 0.53
UBR5-201ENST00000220959 LRRFIP1Q32MZ4 808 aaKnown RBP18.34■□□□□ 0.53
UBR5-201ENST00000220959 FOXD1Q16676 465 aa18.34■□□□□ 0.53
UBR5-201ENST00000220959 C1orf141Q5JVX7 400 aa18.33■□□□□ 0.52
UBR5-201ENST00000220959 CCDC146Q8IYE0 955 aa18.32■□□□□ 0.52
UBR5-201ENST00000220959 NUTM2FA1L443 756 aa18.32■□□□□ 0.52
UBR5-201ENST00000220959 PCMTD1Q96MG8 357 aaPredicted RBP18.32■□□□□ 0.52
UBR5-201ENST00000220959 CENPJQ9HC77 1338 aaPredicted RBP18.32■□□□□ 0.52
UBR5-201ENST00000220959 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.32■□□□□ 0.522e-6■□□□□ 10.7
UBR5-201ENST00000220959 ARHGAP35Q9NRY4 1499 aa18.31■□□□□ 0.52
UBR5-201ENST00000220959 CPLX2Q6PUV4 134 aaKnown RBP18.31■□□□□ 0.52
UBR5-201ENST00000220959 BECN2A8MW95 431 aa18.31■□□□□ 0.52
UBR5-201ENST00000220959 SETD5Q9C0A6 1442 aa18.31■□□□□ 0.52
UBR5-201ENST00000220959 EFCAB2Q5VUJ9 269 aa18.31■□□□□ 0.52
UBR5-201ENST00000220959 CCDC47Q96A33 483 aaKnown RBP18.31■□□□□ 0.52
UBR5-201ENST00000220959 CARMIL2Q6F5E8 1435 aa18.31■□□□□ 0.52
UBR5-201ENST00000220959 GPS2Q13227 327 aa18.3■□□□□ 0.52
UBR5-201ENST00000220959 TRIM29Q14134 588 aa18.3■□□□□ 0.52
UBR5-201ENST00000220959 CWC22Q9HCG8 908 aaKnown RBP18.29■□□□□ 0.52
UBR5-201ENST00000220959 KIF3BO15066 747 aa18.29■□□□□ 0.52
UBR5-201ENST00000220959 CALRP27797 417 aaKnown RBP18.29■□□□□ 0.52
UBR5-201ENST00000220959 NUP155O75694 1391 aa18.29■□□□□ 0.52
UBR5-201ENST00000220959 ATP6V1DQ9Y5K8 247 aa18.28■□□□□ 0.52
UBR5-201ENST00000220959 CARMIL1Q5VZK9 1371 aa18.28■□□□□ 0.52
UBR5-201ENST00000220959 PATL2C9JE40 543 aaKnown RBP18.28■□□□□ 0.52
UBR5-201ENST00000220959 MCTP1Q6DN14 999 aa18.27■□□□□ 0.52
UBR5-201ENST00000220959 NUTM2DQ5VT03 806 aaPredicted RBP18.27■□□□□ 0.51
UBR5-201ENST00000220959 IPO7O95373 1038 aaKnown RBP18.26■□□□□ 0.51
UBR5-201ENST00000220959 DDX11L8A8MPP1 907 aa18.25■□□□□ 0.51
UBR5-201ENST00000220959 MPHOSPH9Q99550 1183 aa18.25■□□□□ 0.51
UBR5-201ENST00000220959 NGEFQ8N5V2 710 aa18.25■□□□□ 0.51
UBR5-201ENST00000220959 ANKRD20A12PQ8NF67 263 aa18.25■□□□□ 0.51
UBR5-201ENST00000220959 WASHC2CQ9Y4E1 1318 aa18.25■□□□□ 0.51
UBR5-201ENST00000220959 VPS37DQ86XT2 251 aa18.25■□□□□ 0.51
UBR5-201ENST00000220959 NEXNQ0ZGT2 675 aa18.24■□□□□ 0.51
UBR5-201ENST00000220959 DHX16O60231 1041 aaKnown RBP18.24■□□□□ 0.51
UBR5-201ENST00000220959 ANKRD45Q5TZF3 282 aa18.24■□□□□ 0.51
UBR5-201ENST00000220959 CCDC43Q96MW1 224 aaKnown RBP18.24■□□□□ 0.51
UBR5-201ENST00000220959 FOXD4L6Q3SYB3 417 aaPredicted RBP18.23■□□□□ 0.51
UBR5-201ENST00000220959 FOXD4L3Q6VB84 417 aaPredicted RBP18.23■□□□□ 0.51
UBR5-201ENST00000220959 FBXW7Q969H0 707 aa18.23■□□□□ 0.51
UBR5-201ENST00000220959 APPP05067 770 aa18.23■□□□□ 0.51
UBR5-201ENST00000220959 ANKRD30AQ9BXX3 1397 aa18.23■□□□□ 0.51
UBR5-201ENST00000220959 TEFQ10587 303 aa18.23■□□□□ 0.51
UBR5-201ENST00000220959 CUX2O14529 1486 aa18.23■□□□□ 0.51
UBR5-201ENST00000220959 HOOK1Q9UJC3 728 aaKnown RBP18.22■□□□□ 0.51
UBR5-201ENST00000220959 TTC5Q8N0Z6 440 aa18.21■□□□□ 0.51
UBR5-201ENST00000220959 RUFY2Q8WXA3 655 aa18.21■□□□□ 0.51
UBR5-201ENST00000220959 DIAPH3Q9NSV4 1193 aa18.21■□□□□ 0.51
UBR5-201ENST00000220959 IPO9Q96P70 1041 aaKnown RBP18.21■□□□□ 0.51
UBR5-201ENST00000220959 DDX49Q9Y6V7 483 aaKnown RBP18.2■□□□□ 0.5
UBR5-201ENST00000220959 MEX3CQ5U5Q3 659 aaKnown RBP18.2■□□□□ 0.5
UBR5-201ENST00000220959 RRP12Q5JTH9 1297 aaKnown RBP18.2■□□□□ 0.5
UBR5-201ENST00000220959 C9orf78Q9NZ63 289 aaPredicted RBP18.2■□□□□ 0.5
UBR5-201ENST00000220959 TRDNQ13061 729 aa18.19■□□□□ 0.5
UBR5-201ENST00000220959 TRAK1Q9UPV9 953 aa18.19■□□□□ 0.5
UBR5-201ENST00000220959 ERICH2A1L162 156 aa18.18■□□□□ 0.5
UBR5-201ENST00000220959 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.18■□□□□ 0.51e-6■■■■■ 64.1
UBR5-201ENST00000220959 ODF2Q5BJF6 829 aa18.18■□□□□ 0.5
UBR5-201ENST00000220959 ELL2O00472 640 aaPredicted RBP18.18■□□□□ 0.5
UBR5-201ENST00000220959 ZNF592Q92610 1267 aa18.17■□□□□ 0.5
UBR5-201ENST00000220959 COG3Q96JB2 828 aa18.17■□□□□ 0.5
UBR5-201ENST00000220959 PDE3BQ13370 1112 aa18.17■□□□□ 0.5
UBR5-201ENST00000220959 CPLX1O14810 134 aa18.17■□□□□ 0.5
UBR5-201ENST00000220959 PHLDB1Q86UU1 1377 aa18.17■□□□□ 0.5
UBR5-201ENST00000220959 NLRP13Q86W25 1043 aa18.16■□□□□ 0.5
UBR5-201ENST00000220959 SYTL4Q96C24 671 aaPredicted RBP18.16■□□□□ 0.5
UBR5-201ENST00000220959 SKOR2Q2VWA4 1001 aaPredicted RBP18.16■□□□□ 0.5
UBR5-201ENST00000220959 ZKSCAN1P17029 563 aaPredicted RBP18.16■□□□□ 0.5
UBR5-201ENST00000220959 EIF2S2P20042 333 aaKnown RBP18.16■□□□□ 0.5
UBR5-201ENST00000220959 RRP7AQ9Y3A4 280 aaKnown RBP18.16■□□□□ 0.5
UBR5-201ENST00000220959 R3HCC1Q9Y3T6 440 aaKnown RBP18.15■□□□□ 0.5
UBR5-201ENST00000220959 CT47A1Q5JQC4 288 aaPredicted RBP18.15■□□□□ 0.5
UBR5-201ENST00000220959 HNRNPMP52272 730 aaKnown RBP eCLIP18.15■□□□□ 0.57e-7■■■□□ 19
UBR5-201ENST00000220959 NFXL1Q6ZNB6 911 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms