RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 MROH1Q8NDA8 1641 aa40.08■■■■■ 4.01
STUB1-201ENST00000219548 MADDQ8WXG6 1647 aa40.08■■■■■ 4.01
STUB1-201ENST00000219548 DEPDC5O75140 1603 aa40.07■■■■■ 4.01
STUB1-201ENST00000219548 RIMS1Q86UR5 1692 aaKnown RBP40.01■■■■□ 3.99
STUB1-201ENST00000219548 PRDM15P57071 1507 aaPredicted RBP40■■■■□ 3.99
STUB1-201ENST00000219548 KDM4FA0A1W2PPD8 638 aa39.99■■■■□ 3.99
STUB1-201ENST00000219548 UNC13BO14795 1591 aa39.98■■■■□ 3.99
STUB1-201ENST00000219548 CLTCQ00610 1675 aaKnown RBP39.98■■■■□ 3.99
STUB1-201ENST00000219548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.96■■■■□ 3.991e-6■■□□□ 13.1
STUB1-201ENST00000219548 CEP152O94986 1710 aa39.95■■■■□ 3.99
STUB1-201ENST00000219548 SETD5Q9C0A6 1442 aa39.95■■■■□ 3.99
STUB1-201ENST00000219548 KDM5DQ9BY66 1539 aa39.91■■■■□ 3.98
STUB1-201ENST00000219548 ZC3H13Q5T200 1668 aaKnown RBP39.89■■■■□ 3.98
STUB1-201ENST00000219548 ESF1Q9H501 851 aaKnown RBP39.89■■■■□ 3.98
STUB1-201ENST00000219548 ABCC3O15438 1527 aa39.88■■■■□ 3.97
STUB1-201ENST00000219548 VWDEQ8N2E2 1590 aa39.87■■■■□ 3.97
STUB1-201ENST00000219548 FAM135AQ9P2D6 1515 aa39.87■■■■□ 3.97
STUB1-201ENST00000219548 PPP6R1Q9UPN7 881 aa39.87■■■■□ 3.97
STUB1-201ENST00000219548 WASHC2CQ9Y4E1 1318 aa39.86■■■■□ 3.97
STUB1-201ENST00000219548 MROH2AA6NES4 1674 aa39.85■■■■□ 3.97
STUB1-201ENST00000219548 KANK1Q14678 1352 aa39.85■■■■□ 3.97
STUB1-201ENST00000219548 RAB3GAP2Q9H2M9 1393 aa39.85■■■■□ 3.97
STUB1-201ENST00000219548 CNTLNQ9NXG0 1405 aa39.84■■■■□ 3.97
STUB1-201ENST00000219548 IQGAP3Q86VI3 1631 aa39.82■■■■□ 3.96
STUB1-201ENST00000219548 C3P01024 1663 aa39.81■■■■□ 3.96
STUB1-201ENST00000219548 CAMSAP1Q5T5Y3 1602 aa39.81■■■■□ 3.96
STUB1-201ENST00000219548 NUP155O75694 1391 aa39.8■■■■□ 3.96
STUB1-201ENST00000219548 PTPRMP28827 1452 aa39.8■■■■□ 3.96
STUB1-201ENST00000219548 TRIM52Q96A61 297 aa39.75■■■■□ 3.95
STUB1-201ENST00000219548 LMTK2Q8IWU2 1503 aa39.75■■■■□ 3.95
STUB1-201ENST00000219548 PLPPR3Q6T4P5 718 aa39.75■■■■□ 3.95
STUB1-201ENST00000219548 PCGF6Q9BYE7 350 aa39.74■■■■□ 3.95
STUB1-201ENST00000219548 ZMYM3Q14202 1370 aa39.73■■■■□ 3.95
STUB1-201ENST00000219548 TET3O43151 1660 aa39.72■■■■□ 3.95
STUB1-201ENST00000219548 CFAP65Q6ZU64 1925 aaKnown RBP39.72■■■■□ 3.95
STUB1-201ENST00000219548 CEBPAP49715 358 aaPredicted RBP39.71■■■■□ 3.95
STUB1-201ENST00000219548 EFCAB6Q5THR3 1501 aa39.68■■■■□ 3.94
STUB1-201ENST00000219548 PZPP20742 1482 aa39.66■■■■□ 3.94
STUB1-201ENST00000219548 E9PCH4 1651 aa39.63■■■■□ 3.93
STUB1-201ENST00000219548 NPATQ14207 1427 aa39.61■■■■□ 3.93
STUB1-201ENST00000219548 ARHGAP31Q2M1Z3 1444 aa39.59■■■■□ 3.93
STUB1-201ENST00000219548 HRCP23327 699 aa39.59■■■■□ 3.93
STUB1-201ENST00000219548 PREX1Q8TCU6 1659 aa39.57■■■■□ 3.93
STUB1-201ENST00000219548 FBXO31Q5XUX0 539 aaPredicted RBP39.56■■■■□ 3.92
STUB1-201ENST00000219548 ACIN1Q9UKV3 1341 aaKnown RBP39.55■■■■□ 3.92
STUB1-201ENST00000219548 SLC4A1APQ9BWU0 796 aaKnown RBP39.55■■■■□ 3.92
STUB1-201ENST00000219548 ERVK-7P63135 1459 aa39.5■■■■□ 3.91
STUB1-201ENST00000219548 RPRD2Q5VT52 1461 aaKnown RBP39.5■■■■□ 3.91
STUB1-201ENST00000219548 SPATA31D1Q6ZQQ2 1576 aa39.49■■■■□ 3.91
STUB1-201ENST00000219548 SETD1BQ9UPS6 1966 aaKnown RBP39.49■■■■□ 3.91
STUB1-201ENST00000219548 MPHOSPH9Q99550 1183 aa39.49■■■■□ 3.91
STUB1-201ENST00000219548 PKD2Q13563 968 aa39.47■■■■□ 3.91
STUB1-201ENST00000219548 SPHKAPQ2M3C7 1700 aa39.43■■■■□ 3.9
STUB1-201ENST00000219548 TNRQ92752 1358 aa39.41■■■■□ 3.9
STUB1-201ENST00000219548 SYNMO15061 1565 aa39.41■■■■□ 3.9
STUB1-201ENST00000219548 FOXD1Q16676 465 aa39.4■■■■□ 3.9
STUB1-201ENST00000219548 MYO3AQ8NEV4 1616 aa39.4■■■■□ 3.9
STUB1-201ENST00000219548 NOS1P29475 1434 aa39.4■■■■□ 3.9
STUB1-201ENST00000219548 AEBP2Q6ZN18 517 aaPredicted RBP39.37■■■■□ 3.89
STUB1-201ENST00000219548 UGGT1Q9NYU2 1555 aa39.3■■■■□ 3.88
STUB1-201ENST00000219548 PTPRTO14522 1441 aa39.3■■■■□ 3.88
STUB1-201ENST00000219548 UHRF1BP1Q6BDS2 1440 aa39.28■■■■□ 3.88
STUB1-201ENST00000219548 ZNF142P52746 1687 aaPredicted RBP39.27■■■■□ 3.88
STUB1-201ENST00000219548 PLA2R1Q13018 1463 aa39.27■■■■□ 3.88
STUB1-201ENST00000219548 TRPM2O94759 1503 aa39.27■■■■□ 3.88
STUB1-201ENST00000219548 PIK3C2BO00750 1634 aa39.26■■■■□ 3.88
STUB1-201ENST00000219548 CEP170BQ9Y4F5 1589 aaPredicted RBP39.26■■■■□ 3.87
STUB1-201ENST00000219548 NLRP1Q9C000 1473 aa39.25■■■■□ 3.87
STUB1-201ENST00000219548 CLTCL1P53675 1640 aa39.22■■■■□ 3.87
STUB1-201ENST00000219548 LMTK3Q96Q04 1460 aa39.21■■■■□ 3.87
STUB1-201ENST00000219548 DHX57Q6P158 1386 aaKnown RBP39.21■■■■□ 3.87
STUB1-201ENST00000219548 A2ML1A8K2U0 1454 aa39.2■■■■□ 3.87
STUB1-201ENST00000219548 IDI1Q13907 227 aa39.18■■■■□ 3.86
STUB1-201ENST00000219548 UBR1Q8IWV7 1749 aa39.17■■■■□ 3.86
STUB1-201ENST00000219548 SLC52A1Q9NWF4 448 aa39.16■■■■□ 3.86
STUB1-201ENST00000219548 MYO5BQ9ULV0 1848 aa39.16■■■■□ 3.86
STUB1-201ENST00000219548 ANKRD30BQ9BXX2 1392 aa39.12■■■■□ 3.85
STUB1-201ENST00000219548 KIF1BO60333 1816 aa39.11■■■■□ 3.85
STUB1-201ENST00000219548 ADGRB3O60242 1522 aa39.11■■■■□ 3.85
STUB1-201ENST00000219548 CCDC144AA2RUR9 1427 aa39.09■■■■□ 3.85
STUB1-201ENST00000219548 TMEM131LA2VDJ0 1609 aa39.08■■■■□ 3.85
STUB1-201ENST00000219548 KDM5AP29375 1690 aaKnown RBP39.08■■■■□ 3.85
STUB1-201ENST00000219548 HSPA2P54652 639 aa39.05■■■■□ 3.84
STUB1-201ENST00000219548 STAG3Q9UJ98 1225 aa39.05■■■■□ 3.84
STUB1-201ENST00000219548 CHGAP10645 457 aaKnown RBP39.04■■■■□ 3.84
STUB1-201ENST00000219548 THEMISQ8N1K5 641 aaPredicted RBP38.97■■■■□ 3.83
STUB1-201ENST00000219548 SLIT1O75093 1534 aa38.89■■■■□ 3.82
STUB1-201ENST00000219548 SPATA31E1Q6ZUB1 1445 aa38.88■■■■□ 3.81
STUB1-201ENST00000219548 ARHGAP23Q9P227 1491 aa38.88■■■■□ 3.81
STUB1-201ENST00000219548 TMEM2Q9UHN6 1383 aa38.87■■■■□ 3.81
STUB1-201ENST00000219548 POLR1AO95602 1720 aaPredicted RBP38.87■■■■□ 3.81
STUB1-201ENST00000219548 STRCQ7RTU9 1775 aa38.86■■■■□ 3.81
STUB1-201ENST00000219548 ZNF326Q5BKZ1 582 aaKnown RBP38.86■■■■□ 3.81
STUB1-201ENST00000219548 SIN3AQ96ST3 1273 aa38.86■■■■□ 3.81
STUB1-201ENST00000219548 NEURL4Q96JN8 1562 aa38.82■■■■□ 3.81
STUB1-201ENST00000219548 RIMS2Q9UQ26 1411 aa38.82■■■■□ 3.8
STUB1-201ENST00000219548 RGL3Q3MIN7 710 aa38.81■■■■□ 3.8
STUB1-201ENST00000219548 ZFYVE9O95405 1425 aa38.81■■■■□ 3.8
STUB1-201ENST00000219548 CCER1Q8TC90 406 aaPredicted RBP38.8■■■■□ 3.8
STUB1-201ENST00000219548 NEXMIFQ5QGS0 1516 aa38.79■■■■□ 3.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms