RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 KIF15Q9NS87 1388 aa12.8□□□□□ -0.36
TUBB1-201ENST00000217133 KIF14Q15058 1648 aa12.8□□□□□ -0.36
TUBB1-201ENST00000217133 DDRGK1Q96HY6 314 aa12.8□□□□□ -0.36
TUBB1-201ENST00000217133 RIMBP3CA6NJZ7 1639 aa12.8□□□□□ -0.36
TUBB1-201ENST00000217133 RIMBP3BA6NNM3 1639 aa12.8□□□□□ -0.36
TUBB1-201ENST00000217133 RIMBP3Q9UFD9 1639 aa12.8□□□□□ -0.36
TUBB1-201ENST00000217133 MYBBP1AQ9BQG0 1328 aaKnown RBP12.79□□□□□ -0.36
TUBB1-201ENST00000217133 HNRNPMP52272 730 aaKnown RBP eCLIP12.79□□□□□ -0.36
TUBB1-201ENST00000217133 ROCK1Q13464 1354 aa12.79□□□□□ -0.36
TUBB1-201ENST00000217133 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.79□□□□□ -0.36
TUBB1-201ENST00000217133 DAPK1P53355 1430 aa12.79□□□□□ -0.36
TUBB1-201ENST00000217133 PKD2Q13563 968 aa12.79□□□□□ -0.36
TUBB1-201ENST00000217133 RALBP1Q15311 655 aa12.79□□□□□ -0.36
TUBB1-201ENST00000217133 KDM2AQ9Y2K7 1162 aa12.78□□□□□ -0.36
TUBB1-201ENST00000217133 ASXL2Q76L83 1435 aa12.78□□□□□ -0.36
TUBB1-201ENST00000217133 BRD4O60885 1362 aaPredicted RBP12.77□□□□□ -0.36
TUBB1-201ENST00000217133 PDE3BQ13370 1112 aa12.76□□□□□ -0.37
TUBB1-201ENST00000217133 ABCC5O15440 1437 aa12.76□□□□□ -0.37
TUBB1-201ENST00000217133 GPATCH8Q9UKJ3 1502 aaKnown RBP12.76□□□□□ -0.37
TUBB1-201ENST00000217133 UHRF1BP1LA0JNW5 1464 aa12.75□□□□□ -0.37
TUBB1-201ENST00000217133 ZCCHC11Q5TAX3 1644 aaKnown RBP12.75□□□□□ -0.37
TUBB1-201ENST00000217133 ST20-MTHFSA0A0A6YYL1 179 aa12.75□□□□□ -0.37
TUBB1-201ENST00000217133 PLIN1O60240 522 aa12.75□□□□□ -0.37
TUBB1-201ENST00000217133 GSE1Q14687 1217 aa12.74□□□□□ -0.37
TUBB1-201ENST00000217133 NLRP13Q86W25 1043 aa12.74□□□□□ -0.37
TUBB1-201ENST00000217133 LRPPRCP42704 1394 aaKnown RBP12.73□□□□□ -0.37
TUBB1-201ENST00000217133 FAM69CQ0P6D2 419 aa12.73□□□□□ -0.37
TUBB1-201ENST00000217133 CDCA7LQ96GN5 454 aa12.73□□□□□ -0.37
TUBB1-201ENST00000217133 BRPF3Q9ULD4 1205 aa12.72□□□□□ -0.37
TUBB1-201ENST00000217133 KIAA1107Q9UPP5 1409 aa12.72□□□□□ -0.37
TUBB1-201ENST00000217133 WASHC2CQ9Y4E1 1318 aa12.72□□□□□ -0.37
TUBB1-201ENST00000217133 SKAP1Q86WV1 359 aa12.72□□□□□ -0.37
TUBB1-201ENST00000217133 SLC4A3P48751 1232 aa12.72□□□□□ -0.37
TUBB1-201ENST00000217133 POLR1AO95602 1720 aaPredicted RBP12.72□□□□□ -0.37
TUBB1-201ENST00000217133 KTN1Q86UP2 1357 aaKnown RBP12.71□□□□□ -0.37
TUBB1-201ENST00000217133 CRBNQ96SW2 442 aa12.71□□□□□ -0.37
TUBB1-201ENST00000217133 WDR7Q9Y4E6 1490 aa12.71□□□□□ -0.38
TUBB1-201ENST00000217133 NFKBIBQ15653 356 aa12.71□□□□□ -0.38
TUBB1-201ENST00000217133 ABCC10Q5T3U5 1492 aa12.71□□□□□ -0.38
TUBB1-201ENST00000217133 BCORL1Q5H9F3 1711 aa12.7□□□□□ -0.38
TUBB1-201ENST00000217133 EIF5BO60841 1220 aaKnown RBP12.7□□□□□ -0.38
TUBB1-201ENST00000217133 DNAJC5Q9H3Z4 198 aa12.7□□□□□ -0.38
TUBB1-201ENST00000217133 AFAP1Q8N556 730 aa12.7□□□□□ -0.38
TUBB1-201ENST00000217133 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.7□□□□□ -0.38
TUBB1-201ENST00000217133 DCAF11Q8TEB1 546 aa12.7□□□□□ -0.38
TUBB1-201ENST00000217133 PZPP20742 1482 aa12.69□□□□□ -0.38
TUBB1-201ENST00000217133 TTC37Q6PGP7 1564 aa12.69□□□□□ -0.38
TUBB1-201ENST00000217133 EFCAB2Q5VUJ9 269 aa12.68□□□□□ -0.38
TUBB1-201ENST00000217133 TRHP20396 242 aaPredicted RBP12.67□□□□□ -0.38
TUBB1-201ENST00000217133 MBD5Q9P267 1494 aa12.67□□□□□ -0.38
TUBB1-201ENST00000217133 CC2D1BQ5T0F9 858 aaKnown RBP12.67□□□□□ -0.38
TUBB1-201ENST00000217133 ARHGAP5Q13017 1502 aa12.67□□□□□ -0.38
TUBB1-201ENST00000217133 NUP155O75694 1391 aa12.66□□□□□ -0.38
TUBB1-201ENST00000217133 FRAT1Q92837 279 aaPredicted RBP12.66□□□□□ -0.38
TUBB1-201ENST00000217133 DNMT1P26358 1616 aaKnown RBP12.66□□□□□ -0.38
TUBB1-201ENST00000217133 TSPY4P0CV99 314 aa12.66□□□□□ -0.38
TUBB1-201ENST00000217133 TSPY10P0CW01 314 aa12.66□□□□□ -0.38
TUBB1-201ENST00000217133 ANKRD30AQ9BXX3 1397 aa12.66□□□□□ -0.38
TUBB1-201ENST00000217133 CAMSAP2Q08AD1 1489 aa12.65□□□□□ -0.38
TUBB1-201ENST00000217133 KDM5CP41229 1560 aa12.65□□□□□ -0.38
TUBB1-201ENST00000217133 RALGAPBQ86X10 1494 aa12.65□□□□□ -0.39
TUBB1-201ENST00000217133 RAPGEF3O95398 923 aa12.64□□□□□ -0.39
TUBB1-201ENST00000217133 CD109Q6YHK3 1445 aa12.64□□□□□ -0.39
TUBB1-201ENST00000217133 PLCH2O75038 1416 aa12.63□□□□□ -0.39
TUBB1-201ENST00000217133 RGS3P49796 1198 aa12.63□□□□□ -0.39
TUBB1-201ENST00000217133 FAM161AQ3B820 660 aa12.62□□□□□ -0.39
TUBB1-201ENST00000217133 ANKRD50Q9ULJ7 1429 aa12.62□□□□□ -0.39
TUBB1-201ENST00000217133 CENPQQ7L2Z9 268 aaPredicted RBP12.62□□□□□ -0.39
TUBB1-201ENST00000217133 UHRF1BP1Q6BDS2 1440 aa12.62□□□□□ -0.39
TUBB1-201ENST00000217133 C20orf194Q5TEA3 1177 aa12.61□□□□□ -0.39
TUBB1-201ENST00000217133 PARD3Q8TEW0 1356 aa12.61□□□□□ -0.39
TUBB1-201ENST00000217133 RGL3Q3MIN7 710 aa12.6□□□□□ -0.39
TUBB1-201ENST00000217133 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.6□□□□□ -0.39
TUBB1-201ENST00000217133 CDC42BPAQ5VT25 1732 aa12.6□□□□□ -0.39
TUBB1-201ENST00000217133 ARHGEF12Q9NZN5 1544 aa12.6□□□□□ -0.39
TUBB1-201ENST00000217133 FANCAO15360 1455 aa12.59□□□□□ -0.39
TUBB1-201ENST00000217133 TRAPPC8Q9Y2L5 1435 aa12.59□□□□□ -0.39
TUBB1-201ENST00000217133 FRAT2O75474 233 aaPredicted RBP12.59□□□□□ -0.39
TUBB1-201ENST00000217133 SYCP2Q9BX26 1530 aa12.58□□□□□ -0.4
TUBB1-201ENST00000217133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.58□□□□□ -0.47e-13■■□□□ 12.4
TUBB1-201ENST00000217133 SCAPERQ9BY12 1400 aa12.58□□□□□ -0.4
TUBB1-201ENST00000217133 WDR43Q15061 677 aaKnown RBP eCLIP12.58□□□□□ -0.4
TUBB1-201ENST00000217133 PANK3Q9H999 370 aa12.57□□□□□ -0.4
TUBB1-201ENST00000217133 SAMD9LQ8IVG5 1584 aa12.57□□□□□ -0.4
TUBB1-201ENST00000217133 CDC42BPBQ9Y5S2 1711 aa12.57□□□□□ -0.4
TUBB1-201ENST00000217133 PER1O15534 1290 aaPredicted RBP12.56□□□□□ -0.4
TUBB1-201ENST00000217133 SPAG9O60271 1321 aaKnown RBP12.55□□□□□ -0.4
TUBB1-201ENST00000217133 KDM2BQ8NHM5 1336 aa12.55□□□□□ -0.4
TUBB1-201ENST00000217133 C9orf84Q5VXU9 1444 aa12.55□□□□□ -0.4
TUBB1-201ENST00000217133 NBPF1Q3BBV0 1214 aa12.55□□□□□ -0.4
TUBB1-201ENST00000217133 ADAMTS8Q9UP79 889 aa12.55□□□□□ -0.4
TUBB1-201ENST00000217133 C8orf34Q49A92 452 aa12.54□□□□□ -0.4
TUBB1-201ENST00000217133 ADGRL1O94910 1474 aa12.54□□□□□ -0.4
TUBB1-201ENST00000217133 PREX2Q70Z35 1606 aa12.53□□□□□ -0.4
TUBB1-201ENST00000217133 TMF1P82094 1093 aa12.53□□□□□ -0.4
TUBB1-201ENST00000217133 GOLGA2Q08379 1002 aa12.53□□□□□ -0.4
TUBB1-201ENST00000217133 ITSN2Q9NZM3 1697 aa12.53□□□□□ -0.4
TUBB1-201ENST00000217133 ADGRL2O95490 1459 aa12.52□□□□□ -0.4
TUBB1-201ENST00000217133 UBE2Q2Q8WVN8 375 aa12.52□□□□□ -0.41
TUBB1-201ENST00000217133 BLMP54132 1417 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms