RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 ZFYVE16Q7Z3T8 1539 aa11.11□□□□□ -0.63
HMGXB4-201ENST00000216106 OSCARQ8IYS5 282 aa11.11□□□□□ -0.63
HMGXB4-201ENST00000216106 BCORL1Q5H9F3 1711 aa11.11□□□□□ -0.63
HMGXB4-201ENST00000216106 MAGI2Q86UL8 1455 aa11.11□□□□□ -0.63
HMGXB4-201ENST00000216106 SPAG9O60271 1321 aaKnown RBP11.11□□□□□ -0.63
HMGXB4-201ENST00000216106 ASXL2Q76L83 1435 aa11.11□□□□□ -0.63
HMGXB4-201ENST00000216106 PLA2R1Q13018 1463 aa11.1□□□□□ -0.63
HMGXB4-201ENST00000216106 CARD11Q9BXL7 1154 aa11.09□□□□□ -0.63
HMGXB4-201ENST00000216106 RGL3Q3MIN7 710 aa11.08□□□□□ -0.64
HMGXB4-201ENST00000216106 RTEL1-TNFRSF6BF6WH68 1400 aa11.08□□□□□ -0.64
HMGXB4-201ENST00000216106 ADGRL1O94910 1474 aa11.08□□□□□ -0.64
HMGXB4-201ENST00000216106 POLR3GLQ9BT43 218 aa11.07□□□□□ -0.64
HMGXB4-201ENST00000216106 ATP7AQ04656 1500 aa11.07□□□□□ -0.64
HMGXB4-201ENST00000216106 INO80Q9ULG1 1556 aaPredicted RBP11.07□□□□□ -0.64
HMGXB4-201ENST00000216106 SCAPERQ9BY12 1400 aa11.06□□□□□ -0.64
HMGXB4-201ENST00000216106 ROCK2O75116 1388 aaKnown RBP11.06□□□□□ -0.64
HMGXB4-201ENST00000216106 MYT1LQ9UL68 1186 aa11.06□□□□□ -0.64
HMGXB4-201ENST00000216106 TRPM1Q7Z4N2 1603 aa11.06□□□□□ -0.64
HMGXB4-201ENST00000216106 A2MP01023 1474 aa11.05□□□□□ -0.64
HMGXB4-201ENST00000216106 PRKRIP1Q9H875 184 aaPredicted RBP11.05□□□□□ -0.64
HMGXB4-201ENST00000216106 PRAG1Q86YV5 1406 aa11.05□□□□□ -0.64
HMGXB4-201ENST00000216106 E9PCH4 1651 aa11.05□□□□□ -0.64
HMGXB4-201ENST00000216106 NPM1P06748 294 aaKnown RBP eCLIP11.05□□□□□ -0.64
HMGXB4-201ENST00000216106 ATP10AO60312 1499 aa11.04□□□□□ -0.64
HMGXB4-201ENST00000216106 DEPDC5O75140 1603 aa11.04□□□□□ -0.64
HMGXB4-201ENST00000216106 CCDC184Q52MB2 194 aa11.04□□□□□ -0.64
HMGXB4-201ENST00000216106 SUPT16HQ9Y5B9 1047 aaKnown RBP11.04□□□□□ -0.64
HMGXB4-201ENST00000216106 ST20-MTHFSA0A0A6YYL1 179 aa11.03□□□□□ -0.64
HMGXB4-201ENST00000216106 CNGB1Q14028 1251 aaPredicted RBP11.02□□□□□ -0.65
HMGXB4-201ENST00000216106 SPHKAPQ2M3C7 1700 aa11.01□□□□□ -0.65
HMGXB4-201ENST00000216106 HNRNPUQ00839 825 aaKnown RBP eCLIP11.01□□□□□ -0.65
HMGXB4-201ENST00000216106 NBPF1Q3BBV0 1214 aa11.01□□□□□ -0.65
HMGXB4-201ENST00000216106 KIDINS220Q9ULH0 1771 aa11.01□□□□□ -0.65
HMGXB4-201ENST00000216106 KIF3BO15066 747 aa11□□□□□ -0.65
HMGXB4-201ENST00000216106 DHX29Q7Z478 1369 aaKnown RBP11□□□□□ -0.65
HMGXB4-201ENST00000216106 TET3O43151 1660 aa11□□□□□ -0.65
HMGXB4-201ENST00000216106 ARID4BQ4LE39 1312 aaPredicted RBP11□□□□□ -0.65
HMGXB4-201ENST00000216106 MRS2Q9HD23 443 aa11□□□□□ -0.65
HMGXB4-201ENST00000216106 TRPM2O94759 1503 aa10.99□□□□□ -0.65
HMGXB4-201ENST00000216106 EIF2AK4Q9P2K8 1649 aaKnown RBP10.99□□□□□ -0.65
HMGXB4-201ENST00000216106 CD109Q6YHK3 1445 aa10.99□□□□□ -0.65
HMGXB4-201ENST00000216106 ZNF518AQ6AHZ1 1483 aa10.99□□□□□ -0.65
HMGXB4-201ENST00000216106 CEP152O94986 1710 aa10.99□□□□□ -0.65
HMGXB4-201ENST00000216106 CLTCL1P53675 1640 aa10.98□□□□□ -0.65
HMGXB4-201ENST00000216106 MROH1Q8NDA8 1641 aa10.98□□□□□ -0.65
HMGXB4-201ENST00000216106 VWDEQ8N2E2 1590 aa10.98□□□□□ -0.65
HMGXB4-201ENST00000216106 PRDM15P57071 1507 aaPredicted RBP10.98□□□□□ -0.65
HMGXB4-201ENST00000216106 KANK1Q14678 1352 aa10.98□□□□□ -0.65
HMGXB4-201ENST00000216106 CFAP74Q9C0B2 1584 aa10.98□□□□□ -0.65
HMGXB4-201ENST00000216106 FAM9BQ8IZU0 186 aa10.98□□□□□ -0.65
HMGXB4-201ENST00000216106 GPRASP1Q5JY77 1395 aa10.97□□□□□ -0.65
HMGXB4-201ENST00000216106 LAMC1P11047 1609 aa10.97□□□□□ -0.65
HMGXB4-201ENST00000216106 PTPRTO14522 1441 aa10.96□□□□□ -0.65
HMGXB4-201ENST00000216106 POGZQ7Z3K3 1410 aa10.95□□□□□ -0.66
HMGXB4-201ENST00000216106 RNF17Q9BXT8 1623 aaKnown RBP10.95□□□□□ -0.66
HMGXB4-201ENST00000216106 MADDQ8WXG6 1647 aa10.95□□□□□ -0.66
HMGXB4-201ENST00000216106 FKBP8Q14318 412 aa10.94□□□□□ -0.66
HMGXB4-201ENST00000216106 UGGT1Q9NYU2 1555 aa10.94□□□□□ -0.66
HMGXB4-201ENST00000216106 HECW2Q9P2P5 1572 aa10.93□□□□□ -0.66
HMGXB4-201ENST00000216106 EFCAB6Q5THR3 1501 aa10.93□□□□□ -0.66
HMGXB4-201ENST00000216106 PPRC1Q5VV67 1664 aaKnown RBP10.93□□□□□ -0.66
HMGXB4-201ENST00000216106 BCANQ96GW7 911 aa10.92□□□□□ -0.66
HMGXB4-201ENST00000216106 COL17A1Q9UMD9 1497 aaPredicted RBP10.92□□□□□ -0.66
HMGXB4-201ENST00000216106 FRMPD1Q5SYB0 1578 aa10.92□□□□□ -0.66
HMGXB4-201ENST00000216106 DISP3Q9P2K9 1392 aa10.92□□□□□ -0.66
HMGXB4-201ENST00000216106 TESK2Q96S53 571 aa10.91□□□□□ -0.66
HMGXB4-201ENST00000216106 ABCA6Q8N139 1617 aa10.91□□□□□ -0.66
HMGXB4-201ENST00000216106 MLH3Q9UHC1 1453 aa10.91□□□□□ -0.66
HMGXB4-201ENST00000216106 NEFLP07196 543 aa10.91□□□□□ -0.66
HMGXB4-201ENST00000216106 KIF1BO60333 1816 aa10.9□□□□□ -0.66
HMGXB4-201ENST00000216106 RAPGEF3O95398 923 aa10.9□□□□□ -0.66
HMGXB4-201ENST00000216106 CFAP65Q6ZU64 1925 aaKnown RBP10.9□□□□□ -0.66
HMGXB4-201ENST00000216106 CYB5RLQ6IPT4 315 aa10.9□□□□□ -0.67
HMGXB4-201ENST00000216106 IQGAP1P46940 1657 aa10.9□□□□□ -0.67
HMGXB4-201ENST00000216106 NEO1Q92859 1461 aa10.89□□□□□ -0.67
HMGXB4-201ENST00000216106 GGT6Q6P531 493 aa10.89□□□□□ -0.67
HMGXB4-201ENST00000216106 MROH2AA6NES4 1674 aa10.89□□□□□ -0.67
HMGXB4-201ENST00000216106 LMTK2Q8IWU2 1503 aa10.89□□□□□ -0.67
HMGXB4-201ENST00000216106 PELP1Q8IZL8 1130 aaKnown RBP10.88□□□□□ -0.67
HMGXB4-201ENST00000216106 ZBED9Q6R2W3 1325 aa10.88□□□□□ -0.67
HMGXB4-201ENST00000216106 MAP3K4Q9Y6R4 1608 aa10.87□□□□□ -0.67
HMGXB4-201ENST00000216106 TMF1P82094 1093 aa10.87□□□□□ -0.67
HMGXB4-201ENST00000216106 NEURL4Q96JN8 1562 aa10.87□□□□□ -0.67
HMGXB4-201ENST00000216106 TMC1Q8TDI8 760 aa10.86□□□□□ -0.67
HMGXB4-201ENST00000216106 RICTORQ6R327 1708 aa10.86□□□□□ -0.67
HMGXB4-201ENST00000216106 NPATQ14207 1427 aa10.86□□□□□ -0.67
HMGXB4-201ENST00000216106 IFT172Q9UG01 1749 aa10.86□□□□□ -0.67
HMGXB4-201ENST00000216106 STAC3Q96MF2 364 aa10.86□□□□□ -0.67
HMGXB4-201ENST00000216106 RIMBP3CA6NJZ7 1639 aa10.86□□□□□ -0.67
HMGXB4-201ENST00000216106 RIMBP3BA6NNM3 1639 aa10.86□□□□□ -0.67
HMGXB4-201ENST00000216106 RIMBP3Q9UFD9 1639 aa10.86□□□□□ -0.67
HMGXB4-201ENST00000216106 DIP2CQ9Y2E4 1556 aa10.85□□□□□ -0.67
HMGXB4-201ENST00000216106 MYBBP1AQ9BQG0 1328 aaKnown RBP10.85□□□□□ -0.67
HMGXB4-201ENST00000216106 SCAF11Q99590 1463 aaKnown RBP10.85□□□□□ -0.67
HMGXB4-201ENST00000216106 KIAA1210Q9ULL0 1709 aa10.85□□□□□ -0.67
HMGXB4-201ENST00000216106 RALBP1Q15311 655 aa10.85□□□□□ -0.67
HMGXB4-201ENST00000216106 KTN1Q86UP2 1357 aaKnown RBP10.84□□□□□ -0.67
HMGXB4-201ENST00000216106 MYOM2P54296 1465 aa10.84□□□□□ -0.67
HMGXB4-201ENST00000216106 PER1O15534 1290 aaPredicted RBP10.84□□□□□ -0.67
HMGXB4-201ENST00000216106 ABCC3O15438 1527 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms