RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 POGZQ7Z3K3 1410 aa26.38■■□□□ 1.81
CTSA-201ENST00000191018 HIRIP3Q9BW71 556 aaPredicted RBP26.38■■□□□ 1.81
CTSA-201ENST00000191018 PLA2R1Q13018 1463 aa26.37■■□□□ 1.81
CTSA-201ENST00000191018 ATP10AO60312 1499 aa26.37■■□□□ 1.81
CTSA-201ENST00000191018 DHX29Q7Z478 1369 aaKnown RBP26.35■■□□□ 1.81
CTSA-201ENST00000191018 VWDEQ8N2E2 1590 aa26.34■■□□□ 1.81
CTSA-201ENST00000191018 MLH3Q9UHC1 1453 aa26.33■■□□□ 1.81
CTSA-201ENST00000191018 UHRF1BP1Q6BDS2 1440 aa26.33■■□□□ 1.8
CTSA-201ENST00000191018 CCDC144AA2RUR9 1427 aa26.31■■□□□ 1.8
CTSA-201ENST00000191018 HECW2Q9P2P5 1572 aa26.31■■□□□ 1.8
CTSA-201ENST00000191018 E9PCH4 1651 aa26.31■■□□□ 1.8
CTSA-201ENST00000191018 PRDM15P57071 1507 aaPredicted RBP26.31■■□□□ 1.8
CTSA-201ENST00000191018 MROH1Q8NDA8 1641 aa26.3■■□□□ 1.8
CTSA-201ENST00000191018 HSPA5P11021 654 aaKnown RBP26.3■■□□□ 1.8
CTSA-201ENST00000191018 EIF4G2P78344 907 aaKnown RBP eCLIP26.3■■□□□ 1.8
CTSA-201ENST00000191018 TET3O43151 1660 aa26.29■■□□□ 1.8
CTSA-201ENST00000191018 DIP2BQ9P265 1576 aa26.27■■□□□ 1.8
CTSA-201ENST00000191018 DDX10Q13206 875 aaKnown RBP26.27■■□□□ 1.8
CTSA-201ENST00000191018 MYT1LQ9UL68 1186 aa26.26■■□□□ 1.79
CTSA-201ENST00000191018 SPATA31E1Q6ZUB1 1445 aa26.25■■□□□ 1.79
CTSA-201ENST00000191018 A2MP01023 1474 aa26.25■■□□□ 1.79
CTSA-201ENST00000191018 RICTORQ6R327 1708 aa26.25■■□□□ 1.79
CTSA-201ENST00000191018 RNF17Q9BXT8 1623 aaKnown RBP26.23■■□□□ 1.79
CTSA-201ENST00000191018 BCORL1Q5H9F3 1711 aa26.23■■□□□ 1.79
CTSA-201ENST00000191018 FRMPD1Q5SYB0 1578 aa26.22■■□□□ 1.79
CTSA-201ENST00000191018 ABCA6Q8N139 1617 aa26.22■■□□□ 1.79
CTSA-201ENST00000191018 RALGAPBQ86X10 1494 aa26.22■■□□□ 1.79
CTSA-201ENST00000191018 KIF3BO15066 747 aa26.22■■□□□ 1.79
CTSA-201ENST00000191018 KANK1Q14678 1352 aa26.22■■□□□ 1.79
CTSA-201ENST00000191018 SPHKAPQ2M3C7 1700 aa26.22■■□□□ 1.79
CTSA-201ENST00000191018 TRPM2O94759 1503 aa26.2■■□□□ 1.79
CTSA-201ENST00000191018 PTPRTO14522 1441 aa26.19■■□□□ 1.78
CTSA-201ENST00000191018 POLR1AO95602 1720 aaPredicted RBP26.19■■□□□ 1.78
CTSA-201ENST00000191018 LMTK2Q8IWU2 1503 aa26.16■■□□□ 1.78
CTSA-201ENST00000191018 WASHC2AQ641Q2 1341 aa26.15■■□□□ 1.78
CTSA-201ENST00000191018 DCAF11Q8TEB1 546 aa26.15■■□□□ 1.78
CTSA-201ENST00000191018 PPRC1Q5VV67 1664 aaKnown RBP26.15■■□□□ 1.78
CTSA-201ENST00000191018 CEP152O94986 1710 aa26.15■■□□□ 1.78
CTSA-201ENST00000191018 RAPGEF3O95398 923 aa26.14■■□□□ 1.78
CTSA-201ENST00000191018 DIP2CQ9Y2E4 1556 aa26.14■■□□□ 1.77
CTSA-201ENST00000191018 EFCAB6Q5THR3 1501 aa26.14■■□□□ 1.77
CTSA-201ENST00000191018 ZNF326Q5BKZ1 582 aaKnown RBP26.13■■□□□ 1.77
CTSA-201ENST00000191018 FAM69CQ0P6D2 419 aa26.13■■□□□ 1.77
CTSA-201ENST00000191018 TRPM1Q7Z4N2 1603 aa26.12■■□□□ 1.77
CTSA-201ENST00000191018 PRAG1Q86YV5 1406 aa26.12■■□□□ 1.77
CTSA-201ENST00000191018 CLTCL1P53675 1640 aa26.11■■□□□ 1.77
CTSA-201ENST00000191018 KDM2AQ9Y2K7 1162 aa26.1■■□□□ 1.77
CTSA-201ENST00000191018 USP47Q96K76 1375 aa26.09■■□□□ 1.77
CTSA-201ENST00000191018 ZMYM4Q5VZL5 1548 aa26.07■■□□□ 1.76
CTSA-201ENST00000191018 TSPOAP1O95153 1857 aa26.07■■□□□ 1.76
CTSA-201ENST00000191018 CCDC7Q96M83 1385 aa26.07■■□□□ 1.76
CTSA-201ENST00000191018 NEURL4Q96JN8 1562 aa26.07■■□□□ 1.76
CTSA-201ENST00000191018 C11orf95C9JLR9 678 aaPredicted RBP26.06■■□□□ 1.76
CTSA-201ENST00000191018 CENPBP07199 599 aaPredicted RBP26.06■■□□□ 1.76
CTSA-201ENST00000191018 RGL3Q3MIN7 710 aa26.06■■□□□ 1.76
CTSA-201ENST00000191018 KIF13AQ9H1H9 1805 aa26.04■■□□□ 1.76
CTSA-201ENST00000191018 LAMC1P11047 1609 aa26.03■■□□□ 1.76
CTSA-201ENST00000191018 YTHDC1Q96MU7 727 aaKnown RBP26.02■■□□□ 1.76
CTSA-201ENST00000191018 CARD11Q9BXL7 1154 aa26.01■■□□□ 1.75
CTSA-201ENST00000191018 YEATS2Q9ULM3 1422 aa26.01■■□□□ 1.75
CTSA-201ENST00000191018 GPRASP1Q5JY77 1395 aa26■■□□□ 1.75
CTSA-201ENST00000191018 ABCC3O15438 1527 aa25.99■■□□□ 1.75
CTSA-201ENST00000191018 CNTLNQ9NXG0 1405 aa25.99■■□□□ 1.75
CTSA-201ENST00000191018 ROCK2O75116 1388 aaKnown RBP25.98■■□□□ 1.75
CTSA-201ENST00000191018 KIF7Q2M1P5 1343 aa25.98■■□□□ 1.75
CTSA-201ENST00000191018 ANP32CO43423 234 aa25.98■■□□□ 1.75
CTSA-201ENST00000191018 KIF1BO60333 1816 aa25.96■■□□□ 1.75
CTSA-201ENST00000191018 MADDQ8WXG6 1647 aa25.96■■□□□ 1.75
CTSA-201ENST00000191018 CAMSAP1Q5T5Y3 1602 aa25.95■■□□□ 1.74
CTSA-201ENST00000191018 NPATQ14207 1427 aa25.95■■□□□ 1.74
CTSA-201ENST00000191018 GGT6Q6P531 493 aa25.95■■□□□ 1.74
CTSA-201ENST00000191018 ZC3H13Q5T200 1668 aaKnown RBP25.95■■□□□ 1.74
CTSA-201ENST00000191018 UGGT1Q9NYU2 1555 aa25.94■■□□□ 1.74
CTSA-201ENST00000191018 STAC3Q96MF2 364 aa25.94■■□□□ 1.74
CTSA-201ENST00000191018 ARID4BQ4LE39 1312 aaPredicted RBP25.93■■□□□ 1.74
CTSA-201ENST00000191018 CCER2I3L3R5 266 aa25.92■■□□□ 1.74
CTSA-201ENST00000191018 REREQ9P2R6 1566 aa25.91■■□□□ 1.74
CTSA-201ENST00000191018 NBPF1Q3BBV0 1214 aa25.89■■□□□ 1.74
CTSA-201ENST00000191018 IFT172Q9UG01 1749 aa25.89■■□□□ 1.74
CTSA-201ENST00000191018 MROH2AA6NES4 1674 aa25.89■■□□□ 1.73
CTSA-201ENST00000191018 WASHC2CQ9Y4E1 1318 aa25.89■■□□□ 1.73
CTSA-201ENST00000191018 SIGLEC1Q9BZZ2 1709 aa25.87■■□□□ 1.73
CTSA-201ENST00000191018 ST20-MTHFSA0A0A6YYL1 179 aa25.87■■□□□ 1.73
CTSA-201ENST00000191018 CFAP65Q6ZU64 1925 aaKnown RBP25.86■■□□□ 1.73
CTSA-201ENST00000191018 ARHGAP31Q2M1Z3 1444 aa25.86■■□□□ 1.73
CTSA-201ENST00000191018 ADGRB3O60242 1522 aa25.86■■□□□ 1.73
CTSA-201ENST00000191018 KIAA1210Q9ULL0 1709 aa25.85■■□□□ 1.73
CTSA-201ENST00000191018 MYOM2P54296 1465 aa25.85■■□□□ 1.73
CTSA-201ENST00000191018 NOS1P29475 1434 aa25.84■■□□□ 1.73
CTSA-201ENST00000191018 AGLP35573 1532 aa25.82■■□□□ 1.72
CTSA-201ENST00000191018 PIK3C2BO00750 1634 aa25.82■■□□□ 1.72
CTSA-201ENST00000191018 IQGAP1P46940 1657 aa25.81■■□□□ 1.72
CTSA-201ENST00000191018 COL17A1Q9UMD9 1497 aaPredicted RBP25.8■■□□□ 1.72
CTSA-201ENST00000191018 SYNMO15061 1565 aa25.79■■□□□ 1.72
CTSA-201ENST00000191018 NRXN1Q9ULB1 1477 aa25.77■■□□□ 1.72
CTSA-201ENST00000191018 ARHGEF40Q8TER5 1519 aa25.76■■□□□ 1.71
CTSA-201ENST00000191018 PPLO60437 1756 aa25.76■■□□□ 1.71
CTSA-201ENST00000191018 PREX1Q8TCU6 1659 aa25.73■■□□□ 1.71
CTSA-201ENST00000191018 SCAF1Q9H7N4 1312 aaKnown RBP25.73■■□□□ 1.71
CTSA-201ENST00000191018 TESK2Q96S53 571 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms