RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 USP47Q96K76 1375 aa16.03■□□□□ 0.16
CHPF2-201ENST00000035307 WASHC2AQ641Q2 1341 aa16.02■□□□□ 0.15
CHPF2-201ENST00000035307 PLEKHH2Q8IVE3 1493 aa16.01■□□□□ 0.15
CHPF2-201ENST00000035307 FBXO31Q5XUX0 539 aaPredicted RBP16.01■□□□□ 0.15
CHPF2-201ENST00000035307 TSHZ2Q9NRE2 1034 aa16■□□□□ 0.15
CHPF2-201ENST00000035307 MINK1Q8N4C8 1332 aaPredicted RBP16■□□□□ 0.15
CHPF2-201ENST00000035307 CEBPAP49715 358 aaPredicted RBP15.99■□□□□ 0.15
CHPF2-201ENST00000035307 PANK3Q9H999 370 aa15.99■□□□□ 0.15
CHPF2-201ENST00000035307 MAP3K1Q13233 1512 aa15.99■□□□□ 0.15
CHPF2-201ENST00000035307 ASXL2Q76L83 1435 aa15.99■□□□□ 0.15
CHPF2-201ENST00000035307 CCER2I3L3R5 266 aa15.98■□□□□ 0.15
CHPF2-201ENST00000035307 KIF7Q2M1P5 1343 aa15.98■□□□□ 0.15
CHPF2-201ENST00000035307 TRAPPC8Q9Y2L5 1435 aa15.97■□□□□ 0.15
CHPF2-201ENST00000035307 CCDC184Q52MB2 194 aa15.96■□□□□ 0.15
CHPF2-201ENST00000035307 RBM19Q9Y4C8 960 aaKnown RBP15.96■□□□□ 0.15
CHPF2-201ENST00000035307 U2SURPO15042 1029 aaKnown RBP15.95■□□□□ 0.14
CHPF2-201ENST00000035307 KIF14Q15058 1648 aa15.95■□□□□ 0.14
CHPF2-201ENST00000035307 ARXQ96QS3 562 aa15.94■□□□□ 0.14
CHPF2-201ENST00000035307 ADGRL1O94910 1474 aa15.94■□□□□ 0.14
CHPF2-201ENST00000035307 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.94■□□□□ 0.14
CHPF2-201ENST00000035307 AKNAQ7Z591 1439 aa15.94■□□□□ 0.14
CHPF2-201ENST00000035307 CCDC141Q6ZP82 1450 aa15.93■□□□□ 0.14
CHPF2-201ENST00000035307 KIAA1107Q9UPP5 1409 aa15.93■□□□□ 0.14
CHPF2-201ENST00000035307 FANCAO15360 1455 aa15.93■□□□□ 0.14
CHPF2-201ENST00000035307 SAMD9Q5K651 1589 aa15.93■□□□□ 0.14
CHPF2-201ENST00000035307 ZBTB47Q9UFB7 747 aaPredicted RBP15.92■□□□□ 0.14
CHPF2-201ENST00000035307 ANKRD30BQ9BXX2 1392 aa15.92■□□□□ 0.14
CHPF2-201ENST00000035307 PPP4R2Q9NY27 417 aa15.92■□□□□ 0.14
CHPF2-201ENST00000035307 SYCP2Q9BX26 1530 aa15.91■□□□□ 0.14
CHPF2-201ENST00000035307 CCDC146Q8IYE0 955 aa15.91■□□□□ 0.14
CHPF2-201ENST00000035307 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.91■□□□□ 0.143e-13■■■■■ 62.4
CHPF2-201ENST00000035307 RBM33Q96EV2 1170 aaKnown RBP15.91■□□□□ 0.14
CHPF2-201ENST00000035307 NEFMP07197 916 aa15.9■□□□□ 0.14
CHPF2-201ENST00000035307 MAPKBP1O60336 1514 aa15.9■□□□□ 0.14
CHPF2-201ENST00000035307 PRKRIP1Q9H875 184 aaPredicted RBP15.9■□□□□ 0.14
CHPF2-201ENST00000035307 CDCA8Q53HL2 280 aa15.9■□□□□ 0.14
CHPF2-201ENST00000035307 MORC1Q86VD1 984 aa15.89■□□□□ 0.13
CHPF2-201ENST00000035307 RGS3P49796 1198 aa15.88■□□□□ 0.13
CHPF2-201ENST00000035307 ANP32EQ9BTT0 268 aa15.88■□□□□ 0.13
CHPF2-201ENST00000035307 CHD1O14646 1710 aa15.88■□□□□ 0.13
CHPF2-201ENST00000035307 SLC26A8Q96RN1 970 aa15.88■□□□□ 0.13
CHPF2-201ENST00000035307 CABP2Q9NPB3 220 aa15.88■□□□□ 0.13
CHPF2-201ENST00000035307 LAS1LQ9Y4W2 734 aaKnown RBP15.88■□□□□ 0.13
CHPF2-201ENST00000035307 PAK3O75914 559 aaPredicted RBP15.87■□□□□ 0.13
CHPF2-201ENST00000035307 ROCK1Q13464 1354 aa15.86■□□□□ 0.13
CHPF2-201ENST00000035307 A0A0G2JS52 829 aa15.86■□□□□ 0.13
CHPF2-201ENST00000035307 CFAP43Q8NDM7 1665 aa15.86■□□□□ 0.13
CHPF2-201ENST00000035307 CCDC7Q96M83 1385 aa15.85■□□□□ 0.13
CHPF2-201ENST00000035307 FRAT1Q92837 279 aaPredicted RBP15.85■□□□□ 0.13
CHPF2-201ENST00000035307 VGFO15240 615 aaPredicted RBP15.84■□□□□ 0.13
CHPF2-201ENST00000035307 PLCH2O75038 1416 aa15.84■□□□□ 0.13
CHPF2-201ENST00000035307 IDI1Q13907 227 aa15.84■□□□□ 0.13
CHPF2-201ENST00000035307 RRP7AQ9Y3A4 280 aaKnown RBP15.84■□□□□ 0.13
CHPF2-201ENST00000035307 ADGRF5Q8IZF2 1346 aa15.84■□□□□ 0.13
CHPF2-201ENST00000035307 CFAP65Q6ZU64 1925 aaKnown RBP15.83■□□□□ 0.12
CHPF2-201ENST00000035307 SLC12A5Q9H2X9 1139 aa15.82■□□□□ 0.12
CHPF2-201ENST00000035307 TXNDC2Q86VQ3 553 aa15.81■□□□□ 0.12
CHPF2-201ENST00000035307 WDR7Q9Y4E6 1490 aa15.8■□□□□ 0.12
CHPF2-201ENST00000035307 KTN1Q86UP2 1357 aaKnown RBP15.8■□□□□ 0.12
CHPF2-201ENST00000035307 ABCC2Q92887 1545 aa15.79■□□□□ 0.12
CHPF2-201ENST00000035307 NUTM2GQ5VZR2 741 aa15.79■□□□□ 0.12
CHPF2-201ENST00000035307 EID1Q9Y6B2 187 aa15.78■□□□□ 0.12
CHPF2-201ENST00000035307 KDM6BO15054 1643 aa15.78■□□□□ 0.12
CHPF2-201ENST00000035307 U2AF1L5P0DN76 240 aaPredicted RBP15.78■□□□□ 0.12
CHPF2-201ENST00000035307 U2AF1Q01081 240 aaKnown RBP eCLIP15.78■□□□□ 0.12
CHPF2-201ENST00000035307 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.78■□□□□ 0.12
CHPF2-201ENST00000035307 GGNBP2Q9H3C7 697 aa15.77■□□□□ 0.12
CHPF2-201ENST00000035307 PLIN1O60240 522 aa15.77■□□□□ 0.11
CHPF2-201ENST00000035307 WAPLQ7Z5K2 1190 aa15.77■□□□□ 0.11
CHPF2-201ENST00000035307 PRAM1Q96QH2 718 aa15.77■□□□□ 0.11
CHPF2-201ENST00000035307 LTV1Q96GA3 475 aaPredicted RBP15.76■□□□□ 0.11
CHPF2-201ENST00000035307 ERBINQ96RT1 1412 aa15.76■□□□□ 0.11
CHPF2-201ENST00000035307 CENPJQ9HC77 1338 aaPredicted RBP15.76■□□□□ 0.11
CHPF2-201ENST00000035307 HDGFP51858 240 aaKnown RBP15.75■□□□□ 0.11
CHPF2-201ENST00000035307 CFAP53Q96M91 514 aa15.75■□□□□ 0.11
CHPF2-201ENST00000035307 HAP1P54257 671 aaPredicted RBP15.73■□□□□ 0.11
CHPF2-201ENST00000035307 NGDNQ8NEJ9 315 aaKnown RBP15.73■□□□□ 0.11
CHPF2-201ENST00000035307 HDGFL2Q7Z4V5 671 aaPredicted RBP15.71■□□□□ 0.11
CHPF2-201ENST00000035307 PMFBP1Q8TBY8 1022 aa15.71■□□□□ 0.11
CHPF2-201ENST00000035307 RCAN3Q9UKA8 241 aa15.71■□□□□ 0.11
CHPF2-201ENST00000035307 DENND4BO75064 1496 aaPredicted RBP15.71■□□□□ 0.11
CHPF2-201ENST00000035307 TCOF1Q13428 1488 aaKnown RBP15.71■□□□□ 0.11
CHPF2-201ENST00000035307 DHX29Q7Z478 1369 aaKnown RBP15.71■□□□□ 0.11
CHPF2-201ENST00000035307 NLRP13Q86W25 1043 aa15.7■□□□□ 0.1
CHPF2-201ENST00000035307 FBLN1P23142 703 aa15.69■□□□□ 0.1
CHPF2-201ENST00000035307 ABCA8O94911 1581 aa15.69■□□□□ 0.1
CHPF2-201ENST00000035307 RPRD2Q5VT52 1461 aaKnown RBP15.69■□□□□ 0.1
CHPF2-201ENST00000035307 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.69■□□□□ 0.16e-7■■■■□ 20.4
CHPF2-201ENST00000035307 HSP90AA1P07900 732 aaKnown RBP15.68■□□□□ 0.1
CHPF2-201ENST00000035307 NUDCQ9Y266 331 aa15.68■□□□□ 0.1
CHPF2-201ENST00000035307 EIF3AQ14152 1382 aaKnown RBP15.68■□□□□ 0.1
CHPF2-201ENST00000035307 MAPK8IP3Q9UPT6 1336 aa15.67■□□□□ 0.1
CHPF2-201ENST00000035307 RALBP1Q15311 655 aa15.67■□□□□ 0.1
CHPF2-201ENST00000035307 PZPP20742 1482 aa15.67■□□□□ 0.1
CHPF2-201ENST00000035307 ABCC10Q5T3U5 1492 aa15.66■□□□□ 0.1
CHPF2-201ENST00000035307 BCL2L13Q9BXK5 485 aa15.66■□□□□ 0.1
CHPF2-201ENST00000035307 EVC2Q86UK5 1308 aa15.66■□□□□ 0.1
CHPF2-201ENST00000035307 RTN4Q9NQC3 1192 aaKnown RBP15.66■□□□□ 0.1
CHPF2-201ENST00000035307 APAF1O14727 1248 aa15.66■□□□□ 0.1
CHPF2-201ENST00000035307 NOP58Q9Y2X3 529 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms