RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 Trappc8E9PWG2 1437 aa20.41■□□□□ 0.86
Upf1-202ENSMUST00000215817 Cyb5rlB1AS42 316 aa20.4■□□□□ 0.86
Upf1-202ENSMUST00000215817 Slc4a1apE9PX68 744 aa20.4■□□□□ 0.86
Upf1-202ENSMUST00000215817 Prex2Q3LAC4 1598 aa20.4■□□□□ 0.86
Upf1-202ENSMUST00000215817 Mlh3A0A1Y7VMP7 1443 aa20.4■□□□□ 0.86
Upf1-202ENSMUST00000215817 Birc3O08863 600 aa20.39■□□□□ 0.86
Upf1-202ENSMUST00000215817 Plin1Q8CGN5 517 aa20.39■□□□□ 0.85
Upf1-202ENSMUST00000215817 OvosQ3UU35 1456 aa20.39■□□□□ 0.85
Upf1-202ENSMUST00000215817 Dcaf11Q91VU6 549 aa20.39■□□□□ 0.85
Upf1-202ENSMUST00000215817 Rapgef6Q5NCJ1 1609 aa20.37■□□□□ 0.85
Upf1-202ENSMUST00000215817 Arhgef12Q8R4H2 1543 aaKnown RBP20.37■□□□□ 0.85
Upf1-202ENSMUST00000215817 Bcl11aQ9QYE3 773 aa20.36■□□□□ 0.85
Upf1-202ENSMUST00000215817 Wdr7Q920I9 1489 aa20.35■□□□□ 0.85
Upf1-202ENSMUST00000215817 Bcl11bQ99PV8 884 aa20.35■□□□□ 0.85
Upf1-202ENSMUST00000215817 Tmf1B9EKI3 1091 aa20.34■□□□□ 0.85
Upf1-202ENSMUST00000215817 Naip2Q9QUK4 1447 aa20.33■□□□□ 0.84
Upf1-202ENSMUST00000215817 Neurod2Q62414 383 aa20.32■□□□□ 0.84
Upf1-202ENSMUST00000215817 Puf60Q3UEB3 564 aaKnown RBP20.32■□□□□ 0.84
Upf1-202ENSMUST00000215817 Caskin1Q6P9K8 1431 aa20.31■□□□□ 0.84
Upf1-202ENSMUST00000215817 Adgrl3Q80TS3 1537 aa20.31■□□□□ 0.84
Upf1-202ENSMUST00000215817 Ap3b2Q9JME5 1082 aa20.31■□□□□ 0.84
Upf1-202ENSMUST00000215817 Sall3Q62255 1320 aa20.3■□□□□ 0.84
Upf1-202ENSMUST00000215817 CenpjQ569L8 1344 aa20.3■□□□□ 0.84
Upf1-202ENSMUST00000215817 Mapkbp1Q6NS57 1503 aa20.29■□□□□ 0.84
Upf1-202ENSMUST00000215817 Dapk1Q80YE7 1442 aa20.28■□□□□ 0.84
Upf1-202ENSMUST00000215817 Pbrm1Q8BSQ9 1634 aaKnown RBP20.28■□□□□ 0.84
Upf1-202ENSMUST00000215817 3425401B19RikD3Z1D3 1412 aa20.28■□□□□ 0.84
Upf1-202ENSMUST00000215817 Eif4g1Q6NZJ6 1600 aaKnown RBP20.27■□□□□ 0.84
Upf1-202ENSMUST00000215817 Ttc21bQ0HA38 1315 aa20.27■□□□□ 0.84
Upf1-202ENSMUST00000215817 Stard8Q8K031 1019 aa20.26■□□□□ 0.83
Upf1-202ENSMUST00000215817 Mapk8ip3Q9ESN9 1337 aa20.25■□□□□ 0.83
Upf1-202ENSMUST00000215817 Pank3Q8R2W9 370 aa20.24■□□□□ 0.83
Upf1-202ENSMUST00000215817 Ankrd36D3Z4K0 1415 aa20.24■□□□□ 0.83
Upf1-202ENSMUST00000215817 DaxxO35613 739 aa20.24■□□□□ 0.83
Upf1-202ENSMUST00000215817 Atp2b2Q9R0K7 1198 aa20.23■□□□□ 0.83
Upf1-202ENSMUST00000215817 1700019A02RikA0A087WPV9 146 aa20.22■□□□□ 0.83
Upf1-202ENSMUST00000215817 Ofd1Q80Z25 1017 aa20.22■□□□□ 0.83
Upf1-202ENSMUST00000215817 Adamts12Q811B3 1600 aa20.22■□□□□ 0.83
Upf1-202ENSMUST00000215817 Exoc6Q8R313 802 aa20.22■□□□□ 0.83
Upf1-202ENSMUST00000215817 Inpp5dQ9ES52 1191 aa20.21■□□□□ 0.83
Upf1-202ENSMUST00000215817 Myom3A2ABU4 1439 aa20.19■□□□□ 0.82
Upf1-202ENSMUST00000215817 Evi5lH3BKQ3 813 aa20.19■□□□□ 0.82
Upf1-202ENSMUST00000215817 GphnQ8BUV3 769 aaKnown RBP20.18■□□□□ 0.82
Upf1-202ENSMUST00000215817 Cabp4Q8VHC5 271 aa20.17■□□□□ 0.82
Upf1-202ENSMUST00000215817 AI481877A2ALV5 1481 aa20.17■□□□□ 0.82
Upf1-202ENSMUST00000215817 U2af1Q9D883 239 aaKnown RBP20.17■□□□□ 0.82
Upf1-202ENSMUST00000215817 HnrnpmQ9D0E1 729 aaKnown RBP20.16■□□□□ 0.82
Upf1-202ENSMUST00000215817 Apbb1Q9QXJ1 710 aa20.15■□□□□ 0.82
Upf1-202ENSMUST00000215817 Abca5Q8K448 1642 aa20.14■□□□□ 0.81
Upf1-202ENSMUST00000215817 HdgfP51859 237 aaKnown RBP20.14■□□□□ 0.81
Upf1-202ENSMUST00000215817 Znf608Q56A10 1511 aa20.13■□□□□ 0.81
Upf1-202ENSMUST00000215817 Senp3Q9EP97 568 aaKnown RBP20.13■□□□□ 0.81
Upf1-202ENSMUST00000215817 PtprtQ99M80 1454 aa20.12■□□□□ 0.81
Upf1-202ENSMUST00000215817 Arhgef40Q3UPH7 1517 aa20.12■□□□□ 0.81
Upf1-202ENSMUST00000215817 Atf3Q60765 181 aa20.12■□□□□ 0.81
Upf1-202ENSMUST00000215817 Fam184bQ0KK56 942 aa20.1■□□□□ 0.81
Upf1-202ENSMUST00000215817 Fam71e1A1L3C1 212 aa20.1■□□□□ 0.81
Upf1-202ENSMUST00000215817 Gsto1O09131 240 aa20.1■□□□□ 0.81
Upf1-202ENSMUST00000215817 Gm6268A2A3U9 297 aa20.09■□□□□ 0.81
Upf1-202ENSMUST00000215817 Abca16E9PWJ7 1678 aa20.09■□□□□ 0.81
Upf1-202ENSMUST00000215817 Iqcf3Q9D498 203 aa20.09■□□□□ 0.81
Upf1-202ENSMUST00000215817 Gm21190A0A0G2JGJ6 266 aa20.08■□□□□ 0.81
Upf1-202ENSMUST00000215817 Cep170Q6A065 1588 aa20.06■□□□□ 0.8
Upf1-202ENSMUST00000215817 Fyb1O35601 819 aa20.06■□□□□ 0.8
Upf1-202ENSMUST00000215817 Erich3F6QRE9 1637 aa20.04■□□□□ 0.8
Upf1-202ENSMUST00000215817 Washc2Q6PGL7 1334 aa20.04■□□□□ 0.8
Upf1-202ENSMUST00000215817 Ptch1Q61115 1434 aa20.04■□□□□ 0.8
Upf1-202ENSMUST00000215817 Ubap1lG3UW59 384 aa20.03■□□□□ 0.8
Upf1-202ENSMUST00000215817 Zscan21Q07231 555 aa20.03■□□□□ 0.8
Upf1-202ENSMUST00000215817 Pak3Q61036 559 aa20.03■□□□□ 0.8
Upf1-202ENSMUST00000215817 Kdm5bQ80Y84 1544 aa20.03■□□□□ 0.8
Upf1-202ENSMUST00000215817 Adcy10Q8C0T9 1614 aa20.03■□□□□ 0.8
Upf1-202ENSMUST00000215817 Abcc2Q8VI47 1543 aa20.03■□□□□ 0.8
Upf1-202ENSMUST00000215817 Rfx7F8VPJ6 1459 aa20.03■□□□□ 0.8
Upf1-202ENSMUST00000215817 Upf2A2AT37 1269 aaKnown RBP20.02■□□□□ 0.8
Upf1-202ENSMUST00000215817 Map3k4O08648 1597 aa20.02■□□□□ 0.79
Upf1-202ENSMUST00000215817 U2surpQ6NV83 1029 aaKnown RBP20.01■□□□□ 0.79
Upf1-202ENSMUST00000215817 Kif7B7ZNG0 1348 aa20.01■□□□□ 0.79
Upf1-202ENSMUST00000215817 Fgd1P52734 960 aa20.01■□□□□ 0.79
Upf1-202ENSMUST00000215817 Adgrb2Q8CGM1 1561 aa20■□□□□ 0.79
Upf1-202ENSMUST00000215817 Ssh2Q5SW75 1423 aa20■□□□□ 0.79
Upf1-202ENSMUST00000215817 Dnajc5P60904 198 aa20■□□□□ 0.79
Upf1-202ENSMUST00000215817 Zscan10Q3URR7 782 aa19.99■□□□□ 0.79
Upf1-202ENSMUST00000215817 Speer4f1Q9D5Q6 258 aa19.99■□□□□ 0.79
Upf1-202ENSMUST00000215817 Zfp777B9EKF4 885 aa19.99■□□□□ 0.79
Upf1-202ENSMUST00000215817 Ylpm1Q9R0I7 1386 aaKnown RBP19.98■□□□□ 0.79
Upf1-202ENSMUST00000215817 Rtf1A2AQ19 715 aaKnown RBP19.98■□□□□ 0.79
Upf1-202ENSMUST00000215817 Rrbp1Q99PL5 1605 aaKnown RBP19.98■□□□□ 0.79
Upf1-202ENSMUST00000215817 Pcdh10E9PXQ7 1057 aa19.97■□□□□ 0.79
Upf1-202ENSMUST00000215817 Tcerg1Q8CGF7 1100 aaKnown RBP19.97■□□□□ 0.79
Upf1-202ENSMUST00000215817 Q8BT18 775 aa19.97■□□□□ 0.79
Upf1-202ENSMUST00000215817 Rtn4Q99P72 1162 aaKnown RBP19.97■□□□□ 0.79
Upf1-202ENSMUST00000215817 Golga2Q921M4 999 aa19.97■□□□□ 0.79
Upf1-202ENSMUST00000215817 Arhgef11Q68FM7 1552 aa19.96■□□□□ 0.79
Upf1-202ENSMUST00000215817 Cdk19Q8BWD8 501 aa19.96■□□□□ 0.79
Upf1-202ENSMUST00000215817 Tsen2Q6P7W5 460 aa19.95■□□□□ 0.78
Upf1-202ENSMUST00000215817 Lmo7E9PYF4 1699 aaKnown RBP19.95■□□□□ 0.78
Upf1-202ENSMUST00000215817 Calr4Q3TQS0 420 aa19.94■□□□□ 0.78
Upf1-202ENSMUST00000215817 Depdc5P61460 1591 aa19.94■□□□□ 0.78
Upf1-202ENSMUST00000215817 Tnnt1O88346 262 aa19.93■□□□□ 0.78
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms