RNA–Protein interactions for RNA: ENSMUST00000197488.4

Csde1-206, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Csde1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-206ENSMUST00000197488 Speer4f1Q9D5Q6 258 aa8.52□□□□□ -1.05
Csde1-206ENSMUST00000197488 Prkrip1Q9CWV6 186 aaKnown RBP8.51□□□□□ -1.05
Csde1-206ENSMUST00000197488 Cnga1P29974 684 aa8.51□□□□□ -1.05
Csde1-206ENSMUST00000197488 Mug2P28666 1451 aa8.51□□□□□ -1.05
Csde1-206ENSMUST00000197488 PxdnQ3UQ28 1475 aa8.51□□□□□ -1.05
Csde1-206ENSMUST00000197488 Cdk13Q69ZA1 1511 aaKnown RBP8.5□□□□□ -1.05
Csde1-206ENSMUST00000197488 Rfx7F8VPJ6 1459 aa8.5□□□□□ -1.05
Csde1-206ENSMUST00000197488 Hsp90ab1P11499 724 aaKnown RBP8.5□□□□□ -1.05
Csde1-206ENSMUST00000197488 Rwdd1Q9CQK7 243 aa8.5□□□□□ -1.05
Csde1-206ENSMUST00000197488 Cul7Q8VE73 1689 aa8.5□□□□□ -1.05
Csde1-206ENSMUST00000197488 Rock2P70336 1388 aa8.5□□□□□ -1.05
Csde1-206ENSMUST00000197488 Dnai1Q8C0M8 701 aa8.49□□□□□ -1.05
Csde1-206ENSMUST00000197488 Plb1Q3TTY0 1478 aa8.49□□□□□ -1.05
Csde1-206ENSMUST00000197488 Myom3A2ABU4 1439 aa8.49□□□□□ -1.05
Csde1-206ENSMUST00000197488 Grin2aP35436 1464 aa8.49□□□□□ -1.05
Csde1-206ENSMUST00000197488 Eif2s2Q99L45 331 aaKnown RBP8.48□□□□□ -1.05
Csde1-206ENSMUST00000197488 Arid4bA2CG63 1314 aaKnown RBP8.48□□□□□ -1.05
Csde1-206ENSMUST00000197488 Zscan10Q3URR7 782 aa8.48□□□□□ -1.05
Csde1-206ENSMUST00000197488 EspnQ9ET47 871 aa8.48□□□□□ -1.05
Csde1-206ENSMUST00000197488 WizO88286 1684 aaKnown RBP8.48□□□□□ -1.05
Csde1-206ENSMUST00000197488 Arhgap31A6X8Z5 1425 aa8.48□□□□□ -1.05
Csde1-206ENSMUST00000197488 Kank1E9Q238 1360 aa8.48□□□□□ -1.05
Csde1-206ENSMUST00000197488 Kdm6bQ5NCY0 1641 aa8.47□□□□□ -1.05
Csde1-206ENSMUST00000197488 Kif16bB1AVY7 1312 aa8.47□□□□□ -1.05
Csde1-206ENSMUST00000197488 Rock1P70335 1354 aa8.47□□□□□ -1.05
Csde1-206ENSMUST00000197488 Tmf1B9EKI3 1091 aa8.47□□□□□ -1.05
Csde1-206ENSMUST00000197488 Ccdc9Q8VC31 543 aaKnown RBP8.47□□□□□ -1.05
Csde1-206ENSMUST00000197488 Clstn2Q9ER65 966 aa8.47□□□□□ -1.05
Csde1-206ENSMUST00000197488 Il16O54824 1322 aa8.46□□□□□ -1.05
Csde1-206ENSMUST00000197488 Sart1Q9Z315 806 aaKnown RBP8.46□□□□□ -1.06
Csde1-206ENSMUST00000197488 Wdr7Q920I9 1489 aa8.46□□□□□ -1.06
Csde1-206ENSMUST00000197488 PrxO55103 1391 aa8.46□□□□□ -1.06
Csde1-206ENSMUST00000197488 NudcO35685 332 aaKnown RBP8.46□□□□□ -1.06
Csde1-206ENSMUST00000197488 Naip6Q9JIB6 1403 aa8.46□□□□□ -1.06
Csde1-206ENSMUST00000197488 Stk24Q99KH8 431 aa8.45□□□□□ -1.06
Csde1-206ENSMUST00000197488 Gm6268A2A3U9 297 aa8.45□□□□□ -1.06
Csde1-206ENSMUST00000197488 Dcaf11Q91VU6 549 aa8.45□□□□□ -1.06
Csde1-206ENSMUST00000197488 AlkP97793 1621 aa8.45□□□□□ -1.06
Csde1-206ENSMUST00000197488 SphkapQ6NSW3 1687 aa8.45□□□□□ -1.06
Csde1-206ENSMUST00000197488 Magi3Q9EQJ9 1476 aa8.45□□□□□ -1.06
Csde1-206ENSMUST00000197488 Srcin1Q9QWI6 1250 aa8.44□□□□□ -1.06
Csde1-206ENSMUST00000197488 Gm20521D3Z5F7 333 aa8.44□□□□□ -1.06
Csde1-206ENSMUST00000197488 Tspyl2Q7TQI8 677 aa8.44□□□□□ -1.06
Csde1-206ENSMUST00000197488 Kif14L0N7N1 1674 aaKnown RBP8.44□□□□□ -1.06
Csde1-206ENSMUST00000197488 Ppp2r1aQ76MZ3 589 aa8.43□□□□□ -1.06
Csde1-206ENSMUST00000197488 Pank1Q8K4K6 548 aa8.43□□□□□ -1.06
Csde1-206ENSMUST00000197488 Ak7Q9D2H2 614 aa8.43□□□□□ -1.06
Csde1-206ENSMUST00000197488 Ppm1gQ61074 542 aa8.43□□□□□ -1.06
Csde1-206ENSMUST00000197488 Kdm3bQ6ZPY7 1562 aa8.43□□□□□ -1.06
Csde1-206ENSMUST00000197488 Gcc2Q8CHG3 1679 aa8.42□□□□□ -1.06
Csde1-206ENSMUST00000197488 Fhod3Q76LL6 1578 aa8.42□□□□□ -1.06
Csde1-206ENSMUST00000197488 Adcy10Q8C0T9 1614 aa8.42□□□□□ -1.06
Csde1-206ENSMUST00000197488 Ccdc30Q8BVF4 654 aa8.42□□□□□ -1.06
Csde1-206ENSMUST00000197488 Cluap1Q8R3P7 413 aa8.42□□□□□ -1.06
Csde1-206ENSMUST00000197488 AknaQ80VW7 1404 aa8.42□□□□□ -1.06
Csde1-206ENSMUST00000197488 Abca5Q8K448 1642 aa8.42□□□□□ -1.06
Csde1-206ENSMUST00000197488 Setbp1Q9Z180 1582 aa8.41□□□□□ -1.06
Csde1-206ENSMUST00000197488 Disp1Q3TDN0 1521 aa8.41□□□□□ -1.06
Csde1-206ENSMUST00000197488 Kif7B7ZNG0 1348 aa8.41□□□□□ -1.06
Csde1-206ENSMUST00000197488 Sall3Q62255 1320 aa8.41□□□□□ -1.06
Csde1-206ENSMUST00000197488 Nkx1-2P42580 305 aa8.41□□□□□ -1.06
Csde1-206ENSMUST00000197488 Fam184bQ0KK56 942 aa8.41□□□□□ -1.06
Csde1-206ENSMUST00000197488 Cd109Q8R422 1442 aa8.4□□□□□ -1.06
Csde1-206ENSMUST00000197488 Golga2Q921M4 999 aa8.4□□□□□ -1.06
Csde1-206ENSMUST00000197488 Vsig10D3YX43 558 aa8.4□□□□□ -1.06
Csde1-206ENSMUST00000197488 Mbd3Q9Z2D8 285 aaKnown RBP8.4□□□□□ -1.06
Csde1-206ENSMUST00000197488 RalgapbQ8BQZ4 1484 aa8.4□□□□□ -1.06
Csde1-206ENSMUST00000197488 Ipo8Q7TMY7 1010 aa8.4□□□□□ -1.07
Csde1-206ENSMUST00000197488 Gas2l2Q5SSG4 860 aa8.39□□□□□ -1.07
Csde1-206ENSMUST00000197488 Fan1Q69ZT1 1020 aa8.39□□□□□ -1.07
Csde1-206ENSMUST00000197488 Polr3aB2RXC6 1390 aa8.39□□□□□ -1.07
Csde1-206ENSMUST00000197488 Map3k5O35099 1380 aa8.38□□□□□ -1.07
Csde1-206ENSMUST00000197488 Srpk2O54781 681 aaKnown RBP8.38□□□□□ -1.07
Csde1-206ENSMUST00000197488 KarsQ99MN1 595 aaKnown RBP8.38□□□□□ -1.07
Csde1-206ENSMUST00000197488 Dnajc5bQ9CQ94 199 aa8.38□□□□□ -1.07
Csde1-206ENSMUST00000197488 Supt6hQ62383 1726 aaKnown RBP8.38□□□□□ -1.07
Csde1-206ENSMUST00000197488 Magi1Q6RHR9 1471 aa8.38□□□□□ -1.07
Csde1-206ENSMUST00000197488 Kif21aQ9QXL2 1672 aa8.38□□□□□ -1.07
Csde1-206ENSMUST00000197488 Arhgef12Q8R4H2 1543 aaKnown RBP8.38□□□□□ -1.07
Csde1-206ENSMUST00000197488 Rapgef6Q5NCJ1 1609 aa8.38□□□□□ -1.07
Csde1-206ENSMUST00000197488 Znf330Q922H9 316 aa8.38□□□□□ -1.07
Csde1-206ENSMUST00000197488 Prex2Q3LAC4 1598 aa8.38□□□□□ -1.07
Csde1-206ENSMUST00000197488 Mre11Q61216 706 aa8.37□□□□□ -1.07
Csde1-206ENSMUST00000197488 Jph4Q80WT0 628 aa8.37□□□□□ -1.07
Csde1-206ENSMUST00000197488 Mbd5B1AYB6 1498 aa8.37□□□□□ -1.07
Csde1-206ENSMUST00000197488 Atp1b4Q99ME6 356 aa8.37□□□□□ -1.07
Csde1-206ENSMUST00000197488 Asxl1P59598 1514 aa8.37□□□□□ -1.07
Csde1-206ENSMUST00000197488 Spag9Q58A65 1321 aaKnown RBP8.37□□□□□ -1.07
Csde1-206ENSMUST00000197488 Pde4cQ3UEI1 686 aa8.37□□□□□ -1.07
Csde1-206ENSMUST00000197488 Gtf2e1Q9D0D5 440 aa8.37□□□□□ -1.07
Csde1-206ENSMUST00000197488 Plekhh1Q80TI1 1356 aa8.36□□□□□ -1.07
Csde1-206ENSMUST00000197488 Zmym4A2A791 1549 aaKnown RBP8.36□□□□□ -1.07
Csde1-206ENSMUST00000197488 Ccdc183A2AJB1 534 aa8.36□□□□□ -1.07
Csde1-206ENSMUST00000197488 Atxn3Q9CVD2 355 aa8.36□□□□□ -1.07
Csde1-206ENSMUST00000197488 Fam163aQ8CAA5 168 aa8.36□□□□□ -1.07
Csde1-206ENSMUST00000197488 Map3k4O08648 1597 aa8.35□□□□□ -1.07
Csde1-206ENSMUST00000197488 Znf692Q3U381 531 aa8.35□□□□□ -1.07
Csde1-206ENSMUST00000197488 Atp7aQ64430 1491 aa8.35□□□□□ -1.07
Csde1-206ENSMUST00000197488 Mrc2Q64449 1479 aa8.35□□□□□ -1.07
Csde1-206ENSMUST00000197488 Ccdc141E9Q8Q6 1531 aa8.35□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms