RNA–Protein interactions for RNA: ENSMUST00000194038.1

Pcdha8-201, Transcript of Protocadherin alpha 8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha8, Length 5,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8-201ENSMUST00000194038 Ak7Q9D2H2 614 aa17.66■□□□□ 0.42
Pcdha8-201ENSMUST00000194038 Kif16bB1AVY7 1312 aa17.65■□□□□ 0.42
Pcdha8-201ENSMUST00000194038 Filip1lQ6P6L0 1131 aa17.65■□□□□ 0.42
Pcdha8-201ENSMUST00000194038 Plin1Q8CGN5 517 aa17.65■□□□□ 0.42
Pcdha8-201ENSMUST00000194038 Ccdc146E9Q9F7 977 aa17.65■□□□□ 0.42
Pcdha8-201ENSMUST00000194038 Usp47Q8BY87 1376 aa17.64■□□□□ 0.42
Pcdha8-201ENSMUST00000194038 Birc3O08863 600 aa17.64■□□□□ 0.41
Pcdha8-201ENSMUST00000194038 Rabep1O35551 862 aa17.64■□□□□ 0.41
Pcdha8-201ENSMUST00000194038 Stk26Q99JT2 416 aa17.64■□□□□ 0.41
Pcdha8-201ENSMUST00000194038 Dhx57Q6P5D3 1388 aaKnown RBP17.64■□□□□ 0.41
Pcdha8-201ENSMUST00000194038 Brpf1B2RRD7 1212 aa17.63■□□□□ 0.41
Pcdha8-201ENSMUST00000194038 Eif2s2Q99L45 331 aaKnown RBP17.63■□□□□ 0.41
Pcdha8-201ENSMUST00000194038 Ccer1Q9CQL2 403 aa17.63■□□□□ 0.41
Pcdha8-201ENSMUST00000194038 Pank3Q8R2W9 370 aa17.63■□□□□ 0.41
Pcdha8-201ENSMUST00000194038 Dnai2A2AC93 623 aa17.62■□□□□ 0.41
Pcdha8-201ENSMUST00000194038 Ralbp1Q62172 648 aa17.62■□□□□ 0.41
Pcdha8-201ENSMUST00000194038 Rpap1Q80TE0 1409 aa17.61■□□□□ 0.41
Pcdha8-201ENSMUST00000194038 Taf3Q5HZG4 932 aa17.61■□□□□ 0.41
Pcdha8-201ENSMUST00000194038 Nol10Q5RJG1 687 aaKnown RBP17.61■□□□□ 0.41
Pcdha8-201ENSMUST00000194038 Nap1l3Q794H2 544 aa17.61■□□□□ 0.41
Pcdha8-201ENSMUST00000194038 Prkrip1Q9CWV6 186 aaKnown RBP17.6■□□□□ 0.41
Pcdha8-201ENSMUST00000194038 Kif4P33174 1231 aa17.59■□□□□ 0.41
Pcdha8-201ENSMUST00000194038 Tsen2Q6P7W5 460 aa17.58■□□□□ 0.41
Pcdha8-201ENSMUST00000194038 Rapgef2Q8CHG7 1496 aa17.58■□□□□ 0.41
Pcdha8-201ENSMUST00000194038 Gripap1Q8VD04 806 aa17.58■□□□□ 0.41
Pcdha8-201ENSMUST00000194038 Trim58Q5NCC9 485 aa17.58■□□□□ 0.41
Pcdha8-201ENSMUST00000194038 Rfx1P48377 963 aa17.58■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 Sh3bgrQ9WUZ7 214 aa17.57■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 Znf710Q3U288 666 aa17.57■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 Ccdc60Q8C4J0 545 aa17.57■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 Plcd4Q8K3R3 807 aa17.57■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 Carmil1Q6EDY6 1374 aa17.57■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 Tnnt1O88346 262 aa17.56■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 Atl3Q91YH5 541 aa17.56■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 Utp3Q9JI13 469 aaKnown RBP17.56■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 Ccnb3Q810T2 1396 aa17.56■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 CenpjQ569L8 1344 aa17.55■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 Ccdc173A0JLY1 547 aa17.55■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 KinQ8K339 391 aa17.55■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 Ankrd36D3Z4K0 1415 aa17.55■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 Tpm2P58774 284 aa17.54■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 Rrp9Q91WM3 475 aaKnown RBP17.54■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 Ccdc34Q3UI66 367 aa17.54■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 Inpp5dQ9ES52 1191 aa17.54■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 Tpd52l1O54818 204 aa17.54■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 G3bp1P97855 465 aaKnown RBP17.53■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 GsdmaQ9EST1 446 aa17.52■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 Lemd3Q9WU40 921 aa17.52■□□□□ 0.4
Pcdha8-201ENSMUST00000194038 Tpm1P58771 284 aa17.51■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 Ecm2Q5FW85 670 aa17.51■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 Fam184bQ0KK56 942 aa17.51■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 Srek1Q8BZX4 494 aaKnown RBP17.5■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 Ccdc47Q9D024 483 aaKnown RBP17.5■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 Hmgn5Q9JL35 406 aa17.5■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 Ccdc183A2AJB1 534 aa17.49■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 EzrP26040 586 aaKnown RBP17.49■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 Kif3aP28741 701 aa17.49■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 Dapk1Q80YE7 1442 aa17.49■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 Tomm22Q9CPQ3 142 aa17.49■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 Ftsj3Q9DBE9 838 aaKnown RBP17.49■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 Pds5bQ4VA53 1446 aaKnown RBP17.48■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 Esx1O88933 382 aa17.48■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 Kif7B7ZNG0 1348 aa17.48■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 Zscan10Q3URR7 782 aa17.47■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 Stk31Q99MW1 1018 aa17.47■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 Pibf1E9Q6K3 756 aa17.47■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 Fan1Q69ZT1 1020 aa17.47■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 CftrP26361 1476 aa17.47■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 Ttll13A4Q9F6 804 aa17.47■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 Senp3Q9EP97 568 aaKnown RBP17.46■□□□□ 0.39
Pcdha8-201ENSMUST00000194038 Gprasp1Q5U4C1 1347 aa17.46■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Slc4a10Q5DTL9 1118 aa17.45■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Chmp3Q9CQ10 224 aa17.45■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Crybg2B7ZCC2 1516 aa17.45■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Cetn4Q8K4K1 168 aa17.45■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Ciz1Q8VEH2 845 aa17.45■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 A0A1L1SQF0 893 aa17.44■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Isy1Q69ZQ2 285 aaKnown RBP17.44■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Ipo4Q8VI75 1082 aa17.44■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Ipo7Q9EPL8 1038 aaKnown RBP17.44■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 IbspQ61711 324 aa17.43■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Kif3bQ61771 747 aa17.43■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Plekhh1Q80TI1 1356 aa17.43■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Ccdc30Q8BVF4 654 aa17.43■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Zrsr2Q62377 462 aaKnown RBP17.42■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Bicd2Q921C5 820 aa17.42■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Anp32eP97822 260 aaKnown RBP17.42■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Mical1Q8VDP3 1048 aa17.42■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 KarsQ99MN1 595 aaKnown RBP17.42■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Phf14Q9D4H9 881 aa17.42■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Gabpb2P81069 414 aa17.42■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Gtf2a1Q99PM3 378 aa17.41■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Psme1P97371 249 aa17.41■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Drc7Q6V3W6 876 aa17.4■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Dixdc1Q80Y83 711 aa17.4■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Smc3Q9CW03 1217 aaKnown RBP17.4■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 AknaQ80VW7 1404 aa17.4■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Cplx2P84086 134 aa17.4■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Pak3Q61036 559 aa17.4■□□□□ 0.38
Pcdha8-201ENSMUST00000194038 Polr3gQ6NXY9 223 aa17.4■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms