RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 Rad21Q61550 635 aaKnown RBP15.42■□□□□ 0.06
Vps54-202ENSMUST00000109578 Jph4Q80WT0 628 aa15.42■□□□□ 0.06
Vps54-202ENSMUST00000109578 Polr3aB2RXC6 1390 aa15.4■□□□□ 0.06
Vps54-202ENSMUST00000109578 Zfp444Q3TDV8 331 aaKnown RBP15.4■□□□□ 0.06
Vps54-202ENSMUST00000109578 Neo1P97798 1493 aa15.39■□□□□ 0.05
Vps54-202ENSMUST00000109578 Cpsf1Q9EPU4 1441 aaKnown RBP15.39■□□□□ 0.05
Vps54-202ENSMUST00000109578 Zcchc11B2RX14 1644 aaKnown RBP15.39■□□□□ 0.05
Vps54-202ENSMUST00000109578 Dot1lQ6XZL8 1540 aa15.39■□□□□ 0.05
Vps54-202ENSMUST00000109578 Ssh2Q5SW75 1423 aa15.38■□□□□ 0.05
Vps54-202ENSMUST00000109578 Caskin1Q6P9K8 1431 aa15.38■□□□□ 0.05
Vps54-202ENSMUST00000109578 Rock2P70336 1388 aa15.38■□□□□ 0.05
Vps54-202ENSMUST00000109578 Zscan21Q07231 555 aa15.38■□□□□ 0.05
Vps54-202ENSMUST00000109578 Ttbk1Q6PCN3 1308 aa15.38■□□□□ 0.05
Vps54-202ENSMUST00000109578 DroshaQ5HZJ0 1373 aaKnown RBP15.38■□□□□ 0.05
Vps54-202ENSMUST00000109578 Ifit1bl1D3Z6F0 470 aa15.37■□□□□ 0.05
Vps54-202ENSMUST00000109578 Tcerg1Q8CGF7 1100 aaKnown RBP15.37■□□□□ 0.05
Vps54-202ENSMUST00000109578 Asxl1P59598 1514 aa15.36■□□□□ 0.05
Vps54-202ENSMUST00000109578 Sart1Q9Z315 806 aaKnown RBP15.36■□□□□ 0.05
Vps54-202ENSMUST00000109578 Pank3Q8R2W9 370 aa15.36■□□□□ 0.05
Vps54-202ENSMUST00000109578 Trappc8E9PWG2 1437 aa15.35■□□□□ 0.05
Vps54-202ENSMUST00000109578 PtprgQ05909 1442 aa15.35■□□□□ 0.05
Vps54-202ENSMUST00000109578 Inpp5dQ9ES52 1191 aa15.35■□□□□ 0.05
Vps54-202ENSMUST00000109578 Anp32bQ9EST5 272 aaKnown RBP15.35■□□□□ 0.05
Vps54-202ENSMUST00000109578 AknaQ80VW7 1404 aa15.35■□□□□ 0.05
Vps54-202ENSMUST00000109578 Mak16Q8BGS0 296 aaKnown RBP15.34■□□□□ 0.05
Vps54-202ENSMUST00000109578 Cd109Q8R422 1442 aa15.34■□□□□ 0.05
Vps54-202ENSMUST00000109578 Lrriq1Q0P5X1 1673 aa15.34■□□□□ 0.05
Vps54-202ENSMUST00000109578 Kank1E9Q238 1360 aa15.33■□□□□ 0.04
Vps54-202ENSMUST00000109578 Atp7aQ64430 1491 aa15.33■□□□□ 0.04
Vps54-202ENSMUST00000109578 Clstn2Q9ER65 966 aa15.33■□□□□ 0.04
Vps54-202ENSMUST00000109578 Fmn2Q9JL04 1578 aa15.33■□□□□ 0.04
Vps54-202ENSMUST00000109578 Lrrc9Q8CDN9 1456 aa15.33■□□□□ 0.04
Vps54-202ENSMUST00000109578 Rock1P70335 1354 aa15.32■□□□□ 0.04
Vps54-202ENSMUST00000109578 Iqgap1Q9JKF1 1657 aaKnown RBP15.32■□□□□ 0.04
Vps54-202ENSMUST00000109578 Fancd2Q80V62 1450 aa15.3■□□□□ 0.04
Vps54-202ENSMUST00000109578 PrxO55103 1391 aa15.3■□□□□ 0.04
Vps54-202ENSMUST00000109578 Arhgap5P97393 1501 aa15.3■□□□□ 0.04
Vps54-202ENSMUST00000109578 Dnmt1P13864 1620 aaKnown RBP15.29■□□□□ 0.04
Vps54-202ENSMUST00000109578 Tarbp1E9Q368 1579 aa15.28■□□□□ 0.04
Vps54-202ENSMUST00000109578 Adgrl2Q8JZZ7 1487 aa15.28■□□□□ 0.04
Vps54-202ENSMUST00000109578 Esx1O88933 382 aa15.28■□□□□ 0.04
Vps54-202ENSMUST00000109578 Ipo9Q91YE6 1041 aa15.28■□□□□ 0.04
Vps54-202ENSMUST00000109578 Kdm5cP41230 1554 aa15.27■□□□□ 0.04
Vps54-202ENSMUST00000109578 Erich6D3Z6S9 713 aa15.27■□□□□ 0.04
Vps54-202ENSMUST00000109578 Mroh3A0A1D5RM54 893 aa15.27■□□□□ 0.04
Vps54-202ENSMUST00000109578 NeflP08551 543 aa15.27■□□□□ 0.04
Vps54-202ENSMUST00000109578 Kdm2aP59997 1161 aa15.26■□□□□ 0.03
Vps54-202ENSMUST00000109578 Fam208aQ69ZR9 1610 aaKnown RBP15.26■□□□□ 0.03
Vps54-202ENSMUST00000109578 Zscan10Q3URR7 782 aa15.25■□□□□ 0.03
Vps54-202ENSMUST00000109578 CrbnQ8C7D2 445 aa15.24■□□□□ 0.03
Vps54-202ENSMUST00000109578 Spag9Q58A65 1321 aaKnown RBP15.24■□□□□ 0.03
Vps54-202ENSMUST00000109578 Pde4cQ3UEI1 686 aa15.23■□□□□ 0.03
Vps54-202ENSMUST00000109578 Gapvd1Q6PAR5 1458 aa15.23■□□□□ 0.03
Vps54-202ENSMUST00000109578 Slc4a1apE9PX68 744 aa15.23■□□□□ 0.03
Vps54-202ENSMUST00000109578 Rusc2Q80U22 1514 aa15.23■□□□□ 0.03
Vps54-202ENSMUST00000109578 Upf2A2AT37 1269 aaKnown RBP15.23■□□□□ 0.03
Vps54-202ENSMUST00000109578 Map3k5O35099 1380 aa15.22■□□□□ 0.03
Vps54-202ENSMUST00000109578 Eif4g3Q80XI3 1579 aaKnown RBP15.22■□□□□ 0.03
Vps54-202ENSMUST00000109578 Tubgcp6G5E8P0 1769 aa15.21■□□□□ 0.03
Vps54-202ENSMUST00000109578 Prkrip1Q9CWV6 186 aaKnown RBP15.21■□□□□ 0.03
Vps54-202ENSMUST00000109578 ChgaP26339 463 aaKnown RBP15.21■□□□□ 0.03
Vps54-202ENSMUST00000109578 Ccdc27Q3V036 639 aa15.2■□□□□ 0.02
Vps54-202ENSMUST00000109578 Tmf1B9EKI3 1091 aa15.2■□□□□ 0.02
Vps54-202ENSMUST00000109578 Zmym4A2A791 1549 aaKnown RBP15.2■□□□□ 0.02
Vps54-202ENSMUST00000109578 Adamts13Q769J6 1426 aa15.2■□□□□ 0.02
Vps54-202ENSMUST00000109578 Sall3Q62255 1320 aa15.2■□□□□ 0.02
Vps54-202ENSMUST00000109578 Gm32742A0A1B0GT42 1604 aa15.2■□□□□ 0.02
Vps54-202ENSMUST00000109578 B4galnt3Q6L8S8 986 aa15.19■□□□□ 0.02
Vps54-202ENSMUST00000109578 Srcin1Q9QWI6 1250 aa15.18■□□□□ 0.02
Vps54-202ENSMUST00000109578 Rrbp1Q99PL5 1605 aaKnown RBP15.18■□□□□ 0.02
Vps54-202ENSMUST00000109578 Apbb1Q9QXJ1 710 aa15.18■□□□□ 0.02
Vps54-202ENSMUST00000109578 Ppp2r1aQ76MZ3 589 aa15.17■□□□□ 0.02
Vps54-202ENSMUST00000109578 Setd1aE9PYH6 1716 aa15.17■□□□□ 0.02
Vps54-202ENSMUST00000109578 Edc4Q3UJB9 1406 aaKnown RBP15.17■□□□□ 0.02
Vps54-202ENSMUST00000109578 Ttll13A4Q9F6 804 aa15.17■□□□□ 0.02
Vps54-202ENSMUST00000109578 Kif16bB1AVY7 1312 aa15.16■□□□□ 0.02
Vps54-202ENSMUST00000109578 Fgd6Q69ZL1 1399 aa15.16■□□□□ 0.02
Vps54-202ENSMUST00000109578 Ak9G3UYQ4 1894 aa15.16■□□□□ 0.02
Vps54-202ENSMUST00000109578 Mink1Q9JM52 1308 aa15.16■□□□□ 0.02
Vps54-202ENSMUST00000109578 Os9Q8K2C7 672 aa15.16■□□□□ 0.02
Vps54-202ENSMUST00000109578 Prdm10Q3UTQ7 1184 aa15.15■□□□□ 0.02
Vps54-202ENSMUST00000109578 Dbr1Q923B1 550 aa15.15■□□□□ 0.02
Vps54-202ENSMUST00000109578 Plch2A2AP18 1501 aa15.14■□□□□ 0.01
Vps54-202ENSMUST00000109578 Gm14025A2AP89 1413 aa15.14■□□□□ 0.01
Vps54-202ENSMUST00000109578 Tex14Q7M6U3 1450 aa15.13■□□□□ 0.01
Vps54-202ENSMUST00000109578 Fam184bQ0KK56 942 aa15.13■□□□□ 0.01
Vps54-202ENSMUST00000109578 Mast1Q9R1L5 1570 aa15.13■□□□□ 0.01
Vps54-202ENSMUST00000109578 Ppip5k1A2ARP1 1436 aa15.13■□□□□ 0.01
Vps54-202ENSMUST00000109578 AI481877A2ALV5 1481 aa15.12■□□□□ 0.01
Vps54-202ENSMUST00000109578 Rnf17Q99MV7 1640 aa15.12■□□□□ 0.01
Vps54-202ENSMUST00000109578 Neurod2Q62414 383 aa15.12■□□□□ 0.01
Vps54-202ENSMUST00000109578 PrkcshO08795 521 aa15.11■□□□□ 0.01
Vps54-202ENSMUST00000109578 Cdc42bpbQ7TT50 1713 aa15.11■□□□□ 0.01
Vps54-202ENSMUST00000109578 Tulp4Q9JIL5 1547 aa15.11■□□□□ 0.01
Vps54-202ENSMUST00000109578 Prdm16A2A935 1275 aa15.11■□□□□ 0.01
Vps54-202ENSMUST00000109578 Gm20521D3Z5F7 333 aa15.09■□□□□ 0.01
Vps54-202ENSMUST00000109578 Speer4f1Q9D5Q6 258 aa15.09■□□□□ 0.01
Vps54-202ENSMUST00000109578 Gm16486A0A1D5RMD1 1434 aa15.09■□□□□ 0.01
Vps54-202ENSMUST00000109578 TnikP83510 1323 aa15.09■□□□□ 0.01
Vps54-202ENSMUST00000109578 Stk24Q99KH8 431 aa15.09■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms