RNA–Protein interactions for RNA: ENSMUST00000107934.1

Shank1-201, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-201ENSMUST00000107934 Pank3Q8R2W9 370 aa19.59■□□□□ 0.73
Shank1-201ENSMUST00000107934 Crybg2B7ZCC2 1516 aa19.58■□□□□ 0.73
Shank1-201ENSMUST00000107934 Usp47Q8BY87 1376 aa19.58■□□□□ 0.73
Shank1-201ENSMUST00000107934 Shq1Q7TMX5 569 aa19.57■□□□□ 0.72
Shank1-201ENSMUST00000107934 Stk31Q99MW1 1018 aa19.57■□□□□ 0.72
Shank1-201ENSMUST00000107934 LrpprcQ6PB66 1392 aaKnown RBP19.56■□□□□ 0.72
Shank1-201ENSMUST00000107934 Cabp4Q8VHC5 271 aa19.56■□□□□ 0.72
Shank1-201ENSMUST00000107934 Tpm3-rs7D3Z2H9 248 aa19.56■□□□□ 0.72
Shank1-201ENSMUST00000107934 Smarce1O54941 411 aaKnown RBP19.56■□□□□ 0.72
Shank1-201ENSMUST00000107934 WrnO09053 1401 aa19.55■□□□□ 0.72
Shank1-201ENSMUST00000107934 R3hcc1Q8BSI6 488 aa19.55■□□□□ 0.72
Shank1-201ENSMUST00000107934 Cttnbp2B9EJA2 1648 aa19.55■□□□□ 0.72
Shank1-201ENSMUST00000107934 Usp40Q8BWR4 1235 aa19.54■□□□□ 0.72
Shank1-201ENSMUST00000107934 Slc4a10Q5DTL9 1118 aa19.54■□□□□ 0.72
Shank1-201ENSMUST00000107934 Smarca2Q6DIC0 1577 aa19.54■□□□□ 0.72
Shank1-201ENSMUST00000107934 Pabpn1Q8CCS6 302 aaKnown RBP19.53■□□□□ 0.72
Shank1-201ENSMUST00000107934 Cc2d2bA0A286YDU8 1405 aa19.52■□□□□ 0.71
Shank1-201ENSMUST00000107934 Ncoa2Q61026 1462 aa19.51■□□□□ 0.71
Shank1-201ENSMUST00000107934 Ipo9Q91YE6 1041 aa19.51■□□□□ 0.71
Shank1-201ENSMUST00000107934 Dhx29Q6PGC1 1365 aaKnown RBP19.5■□□□□ 0.71
Shank1-201ENSMUST00000107934 Mink1Q9JM52 1308 aa19.5■□□□□ 0.71
Shank1-201ENSMUST00000107934 Soga1E1U8D0 1418 aa19.5■□□□□ 0.71
Shank1-201ENSMUST00000107934 CrebrfQ8CDG5 640 aaKnown RBP19.49■□□□□ 0.71
Shank1-201ENSMUST00000107934 Ccdc146E9Q9F7 977 aa19.49■□□□□ 0.71
Shank1-201ENSMUST00000107934 Inpp5dQ9ES52 1191 aa19.48■□□□□ 0.71
Shank1-201ENSMUST00000107934 Ppm1fQ8CGA0 452 aa19.48■□□□□ 0.71
Shank1-201ENSMUST00000107934 Shroom4Q1W617 1475 aa19.47■□□□□ 0.71
Shank1-201ENSMUST00000107934 Ccdc60Q8C4J0 545 aa19.46■□□□□ 0.71
Shank1-201ENSMUST00000107934 Kif7B7ZNG0 1348 aa19.45■□□□□ 0.7
Shank1-201ENSMUST00000107934 Ciz1Q8VEH2 845 aa19.44■□□□□ 0.7
Shank1-201ENSMUST00000107934 GsdmaQ9EST1 446 aa19.44■□□□□ 0.7
Shank1-201ENSMUST00000107934 AppP12023 770 aa19.44■□□□□ 0.7
Shank1-201ENSMUST00000107934 Ccdc47Q9D024 483 aaKnown RBP19.42■□□□□ 0.7
Shank1-201ENSMUST00000107934 Mical1Q8VDP3 1048 aa19.42■□□□□ 0.7
Shank1-201ENSMUST00000107934 Rab11fip3Q8CHD8 1047 aa19.42■□□□□ 0.7
Shank1-201ENSMUST00000107934 Cgnl1Q6AW69 1298 aa19.41■□□□□ 0.7
Shank1-201ENSMUST00000107934 ErbinQ80TH2 1402 aa19.41■□□□□ 0.7
Shank1-201ENSMUST00000107934 Ylpm1Q9R0I7 1386 aaKnown RBP19.41■□□□□ 0.7
Shank1-201ENSMUST00000107934 Gm21190A0A0G2JGJ6 266 aa19.4■□□□□ 0.7
Shank1-201ENSMUST00000107934 Irx3P81067 507 aa19.4■□□□□ 0.7
Shank1-201ENSMUST00000107934 Tpd52l1O54818 204 aa19.4■□□□□ 0.7
Shank1-201ENSMUST00000107934 Cald1E9QA15 768 aaKnown RBP19.4■□□□□ 0.7
Shank1-201ENSMUST00000107934 Fam184bQ0KK56 942 aa19.39■□□□□ 0.7
Shank1-201ENSMUST00000107934 Smg6P61406 1418 aaKnown RBP19.39■□□□□ 0.69
Shank1-201ENSMUST00000107934 Calcoco2A2A6M5 331 aa19.39■□□□□ 0.69
Shank1-201ENSMUST00000107934 Iqgap2Q3UQ44 1575 aa19.39■□□□□ 0.69
Shank1-201ENSMUST00000107934 Tdrd9Q14BI7 1383 aa19.38■□□□□ 0.69
Shank1-201ENSMUST00000107934 Isy1Q69ZQ2 285 aaKnown RBP19.38■□□□□ 0.69
Shank1-201ENSMUST00000107934 Cux1P53564 1515 aa19.38■□□□□ 0.69
Shank1-201ENSMUST00000107934 AU015836B2RUM3 263 aa19.38■□□□□ 0.69
Shank1-201ENSMUST00000107934 Vps53Q8CCB4 832 aa19.38■□□□□ 0.69
Shank1-201ENSMUST00000107934 Atp6v1dP57746 247 aa19.38■□□□□ 0.69
Shank1-201ENSMUST00000107934 Jph4Q80WT0 628 aa19.38■□□□□ 0.69
Shank1-201ENSMUST00000107934 Tomm22Q9CPQ3 142 aa19.38■□□□□ 0.69
Shank1-201ENSMUST00000107934 Rock1P70335 1354 aa19.37■□□□□ 0.69
Shank1-201ENSMUST00000107934 G3bp1P97855 465 aaKnown RBP19.37■□□□□ 0.69
Shank1-201ENSMUST00000107934 Ccer1Q9CQL2 403 aa19.37■□□□□ 0.69
Shank1-201ENSMUST00000107934 Cc2d1aQ8K1A6 943 aa19.37■□□□□ 0.69
Shank1-201ENSMUST00000107934 Chmp7Q8R1T1 451 aa19.36■□□□□ 0.69
Shank1-201ENSMUST00000107934 Fyb1O35601 819 aa19.36■□□□□ 0.69
Shank1-201ENSMUST00000107934 Dapk1Q80YE7 1442 aa19.35■□□□□ 0.69
Shank1-201ENSMUST00000107934 MsnP26041 577 aaKnown RBP19.34■□□□□ 0.69
Shank1-201ENSMUST00000107934 Bcl11bQ99PV8 884 aa19.34■□□□□ 0.69
Shank1-201ENSMUST00000107934 Smc4Q8CG47 1286 aa19.34■□□□□ 0.69
Shank1-201ENSMUST00000107934 RdxP26043 583 aaKnown RBP19.32■□□□□ 0.68
Shank1-201ENSMUST00000107934 Eif2s2Q99L45 331 aaKnown RBP19.32■□□□□ 0.68
Shank1-201ENSMUST00000107934 Chrna2Q91X60 512 aa19.31■□□□□ 0.68
Shank1-201ENSMUST00000107934 Cc2d2aQ8CFW7 1633 aa19.31■□□□□ 0.68
Shank1-201ENSMUST00000107934 ChgaP26339 463 aaKnown RBP19.3■□□□□ 0.68
Shank1-201ENSMUST00000107934 Polr1aO35134 1717 aaKnown RBP19.3■□□□□ 0.68
Shank1-201ENSMUST00000107934 Zscan10Q3URR7 782 aa19.3■□□□□ 0.68
Shank1-201ENSMUST00000107934 Gsto1O09131 240 aa19.28■□□□□ 0.68
Shank1-201ENSMUST00000107934 Dhx16G3X8X0 1044 aaKnown RBP19.27■□□□□ 0.67
Shank1-201ENSMUST00000107934 Tceal9Q9DD24 104 aa19.27■□□□□ 0.67
Shank1-201ENSMUST00000107934 Triml2E9PW10 424 aa19.26■□□□□ 0.67
Shank1-201ENSMUST00000107934 SlkO54988 1233 aa19.26■□□□□ 0.67
Shank1-201ENSMUST00000107934 Pip4k2bQ80XI4 416 aa19.26■□□□□ 0.67
Shank1-201ENSMUST00000107934 ScribQ80U72 1612 aa19.25■□□□□ 0.67
Shank1-201ENSMUST00000107934 Ttll5Q8CHB8 1328 aa19.25■□□□□ 0.67
Shank1-201ENSMUST00000107934 Esx1O88933 382 aa19.25■□□□□ 0.67
Shank1-201ENSMUST00000107934 Tnnt2P50752 301 aa19.25■□□□□ 0.67
Shank1-201ENSMUST00000107934 Kri1Q8VDQ9 704 aaKnown RBP19.25■□□□□ 0.67
Shank1-201ENSMUST00000107934 Nsd2Q8BVE8 1365 aa19.25■□□□□ 0.67
Shank1-201ENSMUST00000107934 Rsph3aQ3UFY4 516 aa19.24■□□□□ 0.67
Shank1-201ENSMUST00000107934 Usp16Q99LG0 825 aa19.24■□□□□ 0.67
Shank1-201ENSMUST00000107934 Gm21969J3QJZ1 289 aa19.24■□□□□ 0.67
Shank1-201ENSMUST00000107934 Gsdma3Q5Y4Y6 464 aa19.24■□□□□ 0.67
Shank1-201ENSMUST00000107934 Gpatch11Q3UFS4 262 aa19.24■□□□□ 0.67
Shank1-201ENSMUST00000107934 Arhgap5P97393 1501 aa19.24■□□□□ 0.67
Shank1-201ENSMUST00000107934 Sf3a1Q8K4Z5 791 aaKnown RBP19.23■□□□□ 0.67
Shank1-201ENSMUST00000107934 St18Q80TY4 1045 aa19.23■□□□□ 0.67
Shank1-201ENSMUST00000107934 Ddx11Q6AXC6 880 aa19.23■□□□□ 0.67
Shank1-201ENSMUST00000107934 Filip1lQ6P6L0 1131 aa19.23■□□□□ 0.67
Shank1-201ENSMUST00000107934 Ralbp1Q62172 648 aa19.23■□□□□ 0.67
Shank1-201ENSMUST00000107934 Kiaa0754Q69ZZ9 979 aa19.23■□□□□ 0.67
Shank1-201ENSMUST00000107934 Nap1l3Q794H2 544 aa19.21■□□□□ 0.67
Shank1-201ENSMUST00000107934 Tpm3P21107 285 aaKnown RBP19.21■□□□□ 0.67
Shank1-201ENSMUST00000107934 Atf3Q60765 181 aa19.21■□□□□ 0.67
Shank1-201ENSMUST00000107934 Nolc1E9Q5C9 702 aaKnown RBP19.2■□□□□ 0.66
Shank1-201ENSMUST00000107934 Rad54l2Q99NG0 1466 aa19.2■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 52.2 ms