RNA–Protein interactions for RNA: ENSMUST00000107802.7

Trim59-201, Transcript of Tripartite motif-containing protein 59, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim59, Length 2,939 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim59-201ENSMUST00000107802 DroshaQ5HZJ0 1373 aaKnown RBP18.71■□□□□ 0.59
Trim59-201ENSMUST00000107802 NhsB1AV60 1647 aa18.7■□□□□ 0.58
Trim59-201ENSMUST00000107802 Ncoa1P70365 1447 aa18.7■□□□□ 0.58
Trim59-201ENSMUST00000107802 Wdr7Q920I9 1489 aa18.69■□□□□ 0.58
Trim59-201ENSMUST00000107802 Slc4a2P13808 1237 aaKnown RBP18.69■□□□□ 0.58
Trim59-201ENSMUST00000107802 AknaQ80VW7 1404 aa18.69■□□□□ 0.58
Trim59-201ENSMUST00000107802 Chd1P40201 1711 aa18.68■□□□□ 0.58
Trim59-201ENSMUST00000107802 Kcnh8P59111 1102 aa18.68■□□□□ 0.58
Trim59-201ENSMUST00000107802 4933416C03RikQ3V063 378 aa18.67■□□□□ 0.58
Trim59-201ENSMUST00000107802 Gm14025A2AP89 1413 aa18.67■□□□□ 0.58
Trim59-201ENSMUST00000107802 Ttll5Q8CHB8 1328 aa18.67■□□□□ 0.58
Trim59-201ENSMUST00000107802 Wwc2Q6NXJ0 1187 aa18.67■□□□□ 0.58
Trim59-201ENSMUST00000107802 Lrrc9Q8CDN9 1456 aa18.65■□□□□ 0.58
Trim59-201ENSMUST00000107802 Cfap74Q3UY96 1578 aa18.65■□□□□ 0.58
Trim59-201ENSMUST00000107802 Hecw1Q8K4P8 1604 aa18.65■□□□□ 0.58
Trim59-201ENSMUST00000107802 Dhx9O70133 1380 aaKnown RBP18.64■□□□□ 0.57
Trim59-201ENSMUST00000107802 Iqcf3Q9D498 203 aa18.63■□□□□ 0.57
Trim59-201ENSMUST00000107802 DaxxO35613 739 aa18.62■□□□□ 0.57
Trim59-201ENSMUST00000107802 Nup155Q99P88 1391 aaKnown RBP18.62■□□□□ 0.57
Trim59-201ENSMUST00000107802 Abcc1O35379 1528 aa18.61■□□□□ 0.57
Trim59-201ENSMUST00000107802 Abca8bQ8K440 1620 aa18.6■□□□□ 0.57
Trim59-201ENSMUST00000107802 Arhgap5P97393 1501 aa18.6■□□□□ 0.57
Trim59-201ENSMUST00000107802 PtprgQ05909 1442 aa18.6■□□□□ 0.57
Trim59-201ENSMUST00000107802 Tcerg1Q8CGF7 1100 aaKnown RBP18.6■□□□□ 0.57
Trim59-201ENSMUST00000107802 Abcc3B2RX12 1523 aa18.59■□□□□ 0.57
Trim59-201ENSMUST00000107802 ChgaP26339 463 aaKnown RBP18.59■□□□□ 0.57
Trim59-201ENSMUST00000107802 Exoc6Q8R313 802 aa18.59■□□□□ 0.57
Trim59-201ENSMUST00000107802 Ipo4Q8VI75 1082 aa18.59■□□□□ 0.57
Trim59-201ENSMUST00000107802 Ssh2Q5SW75 1423 aa18.57■□□□□ 0.56
Trim59-201ENSMUST00000107802 Mug2P28666 1451 aa18.57■□□□□ 0.56
Trim59-201ENSMUST00000107802 Asxl1P59598 1514 aa18.57■□□□□ 0.56
Trim59-201ENSMUST00000107802 Dot1lQ6XZL8 1540 aa18.57■□□□□ 0.56
Trim59-201ENSMUST00000107802 Trappc8E9PWG2 1437 aa18.56■□□□□ 0.56
Trim59-201ENSMUST00000107802 Iqgap1Q9JKF1 1657 aaKnown RBP18.55■□□□□ 0.56
Trim59-201ENSMUST00000107802 Trak1Q6PD31 939 aa18.54■□□□□ 0.56
Trim59-201ENSMUST00000107802 Cdc42bpbQ7TT50 1713 aa18.54■□□□□ 0.56
Trim59-201ENSMUST00000107802 Fkbp15Q6P9Q6 1216 aaKnown RBP18.53■□□□□ 0.56
Trim59-201ENSMUST00000107802 Naip6Q9JIB6 1403 aa18.53■□□□□ 0.56
Trim59-201ENSMUST00000107802 Cpsf1Q9EPU4 1441 aaKnown RBP18.52■□□□□ 0.55
Trim59-201ENSMUST00000107802 Rock1P70335 1354 aa18.5■□□□□ 0.55
Trim59-201ENSMUST00000107802 Dapk1Q80YE7 1442 aa18.5■□□□□ 0.55
Trim59-201ENSMUST00000107802 Map4P27546 1125 aaKnown RBP18.5■□□□□ 0.55
Trim59-201ENSMUST00000107802 Gm13695A2AK44 830 aa18.49■□□□□ 0.55
Trim59-201ENSMUST00000107802 Ofd1Q80Z25 1017 aa18.48■□□□□ 0.55
Trim59-201ENSMUST00000107802 Robo2Q7TPD3 1470 aa18.48■□□□□ 0.55
Trim59-201ENSMUST00000107802 L3mbtl2P59178 703 aa18.48■□□□□ 0.55
Trim59-201ENSMUST00000107802 RalgapbQ8BQZ4 1484 aa18.47■□□□□ 0.55
Trim59-201ENSMUST00000107802 Myom3A2ABU4 1439 aa18.47■□□□□ 0.55
Trim59-201ENSMUST00000107802 Atp10dQ8K2X1 1416 aa18.47■□□□□ 0.55
Trim59-201ENSMUST00000107802 Kidins220E9Q9B7 1793 aa18.46■□□□□ 0.55
Trim59-201ENSMUST00000107802 Cdk13Q69ZA1 1511 aaKnown RBP18.46■□□□□ 0.55
Trim59-201ENSMUST00000107802 Plekhg5Q66T02 1073 aa18.46■□□□□ 0.55
Trim59-201ENSMUST00000107802 Abca17E9PX95 1733 aa18.45■□□□□ 0.54
Trim59-201ENSMUST00000107802 Cwc22Q8C5N3 908 aaKnown RBP18.45■□□□□ 0.54
Trim59-201ENSMUST00000107802 Rgl3Q3UYI5 709 aa18.44■□□□□ 0.54
Trim59-201ENSMUST00000107802 Ppip5k1A2ARP1 1436 aa18.44■□□□□ 0.54
Trim59-201ENSMUST00000107802 Polr3aB2RXC6 1390 aa18.44■□□□□ 0.54
Trim59-201ENSMUST00000107802 Clstn2Q9ER65 966 aa18.43■□□□□ 0.54
Trim59-201ENSMUST00000107802 Sart1Q9Z315 806 aaKnown RBP18.43■□□□□ 0.54
Trim59-201ENSMUST00000107802 PnisrA2AJT4 805 aaKnown RBP18.43■□□□□ 0.54
Trim59-201ENSMUST00000107802 AI481877A2ALV5 1481 aa18.42■□□□□ 0.54
Trim59-201ENSMUST00000107802 Kcnn1Q9EQR3 537 aa18.42■□□□□ 0.54
Trim59-201ENSMUST00000107802 Atp7aQ64430 1491 aa18.41■□□□□ 0.54
Trim59-201ENSMUST00000107802 Prdm16A2A935 1275 aa18.4■□□□□ 0.54
Trim59-201ENSMUST00000107802 Rrp7aQ9D1C9 280 aaKnown RBP18.4■□□□□ 0.54
Trim59-201ENSMUST00000107802 Igf1rQ60751 1373 aa18.4■□□□□ 0.54
Trim59-201ENSMUST00000107802 Cd109Q8R422 1442 aa18.4■□□□□ 0.54
Trim59-201ENSMUST00000107802 Tarbp1E9Q368 1579 aa18.39■□□□□ 0.53
Trim59-201ENSMUST00000107802 Rundc1Q0VDN7 615 aa18.38■□□□□ 0.53
Trim59-201ENSMUST00000107802 Cep170Q6A065 1588 aa18.38■□□□□ 0.53
Trim59-201ENSMUST00000107802 Znf608Q56A10 1511 aa18.38■□□□□ 0.53
Trim59-201ENSMUST00000107802 ShprhQ7TPQ3 1674 aa18.38■□□□□ 0.53
Trim59-201ENSMUST00000107802 Setd1aE9PYH6 1716 aa18.37■□□□□ 0.53
Trim59-201ENSMUST00000107802 Xrn1P97789 1719 aaKnown RBP18.36■□□□□ 0.53
Trim59-201ENSMUST00000107802 Gapvd1Q6PAR5 1458 aa18.36■□□□□ 0.53
Trim59-201ENSMUST00000107802 Usp54Q8BL06 1588 aaKnown RBP18.35■□□□□ 0.53
Trim59-201ENSMUST00000107802 Kif1bQ60575 1816 aaKnown RBP18.35■□□□□ 0.53
Trim59-201ENSMUST00000107802 Rock2P70336 1388 aa18.34■□□□□ 0.53
Trim59-201ENSMUST00000107802 Zfyve16Q80U44 1528 aa18.34■□□□□ 0.53
Trim59-201ENSMUST00000107802 Tubgcp6G5E8P0 1769 aa18.34■□□□□ 0.53
Trim59-201ENSMUST00000107802 Card11Q8CIS0 1159 aa18.33■□□□□ 0.53
Trim59-201ENSMUST00000107802 Abca9Q8K449 1623 aa18.33■□□□□ 0.52
Trim59-201ENSMUST00000107802 Adamts13Q769J6 1426 aa18.33■□□□□ 0.52
Trim59-201ENSMUST00000107802 Spag9Q58A65 1321 aaKnown RBP18.32■□□□□ 0.52
Trim59-201ENSMUST00000107802 Ythdc2B2RR83 1445 aaKnown RBP18.32■□□□□ 0.52
Trim59-201ENSMUST00000107802 CanxP35564 591 aaKnown RBP18.31■□□□□ 0.52
Trim59-201ENSMUST00000107802 PtprtQ99M80 1454 aa18.29■□□□□ 0.52
Trim59-201ENSMUST00000107802 Edc4Q3UJB9 1406 aaKnown RBP18.29■□□□□ 0.52
Trim59-201ENSMUST00000107802 Myo5cE9Q1F5 1742 aa18.29■□□□□ 0.52
Trim59-201ENSMUST00000107802 Sart3Q9JLI8 962 aaKnown RBP18.29■□□□□ 0.52
Trim59-201ENSMUST00000107802 Kdm5cP41230 1554 aa18.27■□□□□ 0.51
Trim59-201ENSMUST00000107802 Erbb3Q61526 1339 aa18.27■□□□□ 0.51
Trim59-201ENSMUST00000107802 Grwd1Q810D6 446 aaKnown RBP18.26■□□□□ 0.51
Trim59-201ENSMUST00000107802 Pde4cQ3UEI1 686 aa18.26■□□□□ 0.51
Trim59-201ENSMUST00000107802 Nos1Q9Z0J4 1429 aa18.26■□□□□ 0.51
Trim59-201ENSMUST00000107802 Map3k5O35099 1380 aa18.25■□□□□ 0.51
Trim59-201ENSMUST00000107802 Tmem131lQ3U3D7 1597 aa18.24■□□□□ 0.51
Trim59-201ENSMUST00000107802 Nkx1-2P42580 305 aa18.24■□□□□ 0.51
Trim59-201ENSMUST00000107802 Nsd2Q8BVE8 1365 aa18.24■□□□□ 0.51
Trim59-201ENSMUST00000107802 Fndc1E9Q043 1732 aa18.23■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms