RNA–Protein interactions for RNA: ENSMUST00000081654.12

Col18a1-202, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

TSL 1 (best) BASIC

Gene Col18a1, Length 5,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-202ENSMUST00000081654 Cluap1Q8R3P7 413 aa20.51■□□□□ 0.87
Col18a1-202ENSMUST00000081654 ErbinQ80TH2 1402 aa20.5■□□□□ 0.87
Col18a1-202ENSMUST00000081654 Stk31Q99MW1 1018 aa20.49■□□□□ 0.87
Col18a1-202ENSMUST00000081654 Fam184bQ0KK56 942 aa20.49■□□□□ 0.87
Col18a1-202ENSMUST00000081654 Smg6P61406 1418 aaKnown RBP20.49■□□□□ 0.87
Col18a1-202ENSMUST00000081654 Dnai1Q8C0M8 701 aa20.48■□□□□ 0.87
Col18a1-202ENSMUST00000081654 Urb2E9Q7L1 1524 aaKnown RBP20.48■□□□□ 0.87
Col18a1-202ENSMUST00000081654 Inpp5dQ9ES52 1191 aa20.47■□□□□ 0.87
Col18a1-202ENSMUST00000081654 Ankrd36D3Z4K0 1415 aa20.47■□□□□ 0.87
Col18a1-202ENSMUST00000081654 Prdm16A2A935 1275 aa20.46■□□□□ 0.87
Col18a1-202ENSMUST00000081654 Dapk1Q80YE7 1442 aa20.46■□□□□ 0.87
Col18a1-202ENSMUST00000081654 Rad54l2Q99NG0 1466 aa20.45■□□□□ 0.87
Col18a1-202ENSMUST00000081654 Cabp4Q8VHC5 271 aa20.45■□□□□ 0.86
Col18a1-202ENSMUST00000081654 Ipo8Q7TMY7 1010 aa20.44■□□□□ 0.86
Col18a1-202ENSMUST00000081654 Rock1P70335 1354 aa20.44■□□□□ 0.86
Col18a1-202ENSMUST00000081654 NrkQ9R0G8 1455 aa20.44■□□□□ 0.86
Col18a1-202ENSMUST00000081654 MecomP14404 1042 aa20.44■□□□□ 0.86
Col18a1-202ENSMUST00000081654 Q8BT18 775 aa20.44■□□□□ 0.86
Col18a1-202ENSMUST00000081654 Duox2A2AQ99 1517 aa20.43■□□□□ 0.86
Col18a1-202ENSMUST00000081654 Pibf1E9Q6K3 756 aa20.42■□□□□ 0.86
Col18a1-202ENSMUST00000081654 Kif7B7ZNG0 1348 aa20.42■□□□□ 0.86
Col18a1-202ENSMUST00000081654 GsdmaQ9EST1 446 aa20.42■□□□□ 0.86
Col18a1-202ENSMUST00000081654 Rab11fip3Q8CHD8 1047 aa20.42■□□□□ 0.86
Col18a1-202ENSMUST00000081654 Mink1Q9JM52 1308 aa20.41■□□□□ 0.86
Col18a1-202ENSMUST00000081654 Cc2d2aQ8CFW7 1633 aa20.4■□□□□ 0.86
Col18a1-202ENSMUST00000081654 Spryd3E9Q9B3 442 aa20.4■□□□□ 0.86
Col18a1-202ENSMUST00000081654 Iffo2Q8R2V2 512 aa20.4■□□□□ 0.86
Col18a1-202ENSMUST00000081654 Anapc15P60007 132 aa20.39■□□□□ 0.85
Col18a1-202ENSMUST00000081654 Pak3Q61036 559 aa20.38■□□□□ 0.85
Col18a1-202ENSMUST00000081654 Mfap1aC0HKD8 439 aaKnown RBP20.38■□□□□ 0.85
Col18a1-202ENSMUST00000081654 Mfap1bC0HKD9 439 aaKnown RBP20.38■□□□□ 0.85
Col18a1-202ENSMUST00000081654 Adam1bQ8R534 806 aa20.38■□□□□ 0.85
Col18a1-202ENSMUST00000081654 Vps8Q0P5W1 1427 aa20.38■□□□□ 0.85
Col18a1-202ENSMUST00000081654 Zscan10Q3URR7 782 aa20.38■□□□□ 0.85
Col18a1-202ENSMUST00000081654 Senp3Q9EP97 568 aaKnown RBP20.37■□□□□ 0.85
Col18a1-202ENSMUST00000081654 Dnai2A2AC93 623 aa20.36■□□□□ 0.85
Col18a1-202ENSMUST00000081654 Chmp3Q9CQ10 224 aa20.36■□□□□ 0.85
Col18a1-202ENSMUST00000081654 Cgnl1Q6AW69 1298 aa20.36■□□□□ 0.85
Col18a1-202ENSMUST00000081654 Pde4cQ3UEI1 686 aa20.36■□□□□ 0.85
Col18a1-202ENSMUST00000081654 Gm973E9Q295 1059 aa20.35■□□□□ 0.85
Col18a1-202ENSMUST00000081654 Ift140E9PY46 1464 aa20.35■□□□□ 0.85
Col18a1-202ENSMUST00000081654 Ralbp1Q62172 648 aa20.34■□□□□ 0.85
Col18a1-202ENSMUST00000081654 Smarce1O54941 411 aaKnown RBP20.34■□□□□ 0.85
Col18a1-202ENSMUST00000081654 Ccdc60Q8C4J0 545 aa20.33■□□□□ 0.85
Col18a1-202ENSMUST00000081654 Arhgap31A6X8Z5 1425 aa20.32■□□□□ 0.84
Col18a1-202ENSMUST00000081654 PogzQ8BZH4 1409 aaKnown RBP20.32■□□□□ 0.84
Col18a1-202ENSMUST00000081654 Naip1Q9QWK5 1403 aa20.32■□□□□ 0.84
Col18a1-202ENSMUST00000081654 Brpf1B2RRD7 1212 aa20.32■□□□□ 0.84
Col18a1-202ENSMUST00000081654 Ipo9Q91YE6 1041 aa20.32■□□□□ 0.84
Col18a1-202ENSMUST00000081654 Fgd6Q69ZL1 1399 aa20.32■□□□□ 0.84
Col18a1-202ENSMUST00000081654 Map3k1P53349 1493 aa20.31■□□□□ 0.84
Col18a1-202ENSMUST00000081654 Gm7298A0A0N4SVU1 1476 aa20.3■□□□□ 0.84
Col18a1-202ENSMUST00000081654 Grin2bQ01097 1482 aa20.3■□□□□ 0.84
Col18a1-202ENSMUST00000081654 R3hcc1Q8BSI6 488 aa20.3■□□□□ 0.84
Col18a1-202ENSMUST00000081654 Mrc2Q64449 1479 aa20.29■□□□□ 0.84
Col18a1-202ENSMUST00000081654 Arhgap5P97393 1501 aa20.29■□□□□ 0.84
Col18a1-202ENSMUST00000081654 Gsto1O09131 240 aa20.28■□□□□ 0.84
Col18a1-202ENSMUST00000081654 Pcmtd1P59913 357 aa20.28■□□□□ 0.84
Col18a1-202ENSMUST00000081654 G3bp1P97855 465 aaKnown RBP20.28■□□□□ 0.84
Col18a1-202ENSMUST00000081654 GorabQ8BRM2 368 aa20.28■□□□□ 0.84
Col18a1-202ENSMUST00000081654 Gm21190A0A0G2JGJ6 266 aa20.28■□□□□ 0.84
Col18a1-202ENSMUST00000081654 Ciz1Q8VEH2 845 aa20.28■□□□□ 0.84
Col18a1-202ENSMUST00000081654 Atp6v1dP57746 247 aa20.26■□□□□ 0.83
Col18a1-202ENSMUST00000081654 Puf60Q3UEB3 564 aaKnown RBP20.26■□□□□ 0.83
Col18a1-202ENSMUST00000081654 Slc4a10Q5DTL9 1118 aa20.25■□□□□ 0.83
Col18a1-202ENSMUST00000081654 Fyb1O35601 819 aa20.24■□□□□ 0.83
Col18a1-202ENSMUST00000081654 AampJ3QN89 436 aa20.24■□□□□ 0.83
Col18a1-202ENSMUST00000081654 FanciQ8K368 1330 aa20.24■□□□□ 0.83
Col18a1-202ENSMUST00000081654 CgnP59242 1191 aa20.24■□□□□ 0.83
Col18a1-202ENSMUST00000081654 Ccdc146E9Q9F7 977 aa20.23■□□□□ 0.83
Col18a1-202ENSMUST00000081654 Arhgef5E9Q7D5 1581 aa20.23■□□□□ 0.83
Col18a1-202ENSMUST00000081654 Ylpm1Q9R0I7 1386 aaKnown RBP20.23■□□□□ 0.83
Col18a1-202ENSMUST00000081654 Smc4Q8CG47 1286 aa20.22■□□□□ 0.83
Col18a1-202ENSMUST00000081654 Cd109Q8R422 1442 aa20.22■□□□□ 0.83
Col18a1-202ENSMUST00000081654 Chmp7Q8R1T1 451 aa20.22■□□□□ 0.83
Col18a1-202ENSMUST00000081654 Esx1O88933 382 aa20.22■□□□□ 0.83
Col18a1-202ENSMUST00000081654 Tpm3-rs7D3Z2H9 248 aa20.22■□□□□ 0.83
Col18a1-202ENSMUST00000081654 Map3k5O35099 1380 aa20.21■□□□□ 0.83
Col18a1-202ENSMUST00000081654 Frmpd1A2AKB4 1549 aa20.21■□□□□ 0.83
Col18a1-202ENSMUST00000081654 Mroh2bQ7M6Y6 1581 aa20.2■□□□□ 0.82
Col18a1-202ENSMUST00000081654 Erich6bQ9D4S6 220 aa20.2■□□□□ 0.82
Col18a1-202ENSMUST00000081654 Zfp644E9QA22 1323 aa20.19■□□□□ 0.82
Col18a1-202ENSMUST00000081654 Dnttip2Q8R2M2 758 aaKnown RBP20.19■□□□□ 0.82
Col18a1-202ENSMUST00000081654 Fam163aQ8CAA5 168 aa20.18■□□□□ 0.82
Col18a1-202ENSMUST00000081654 Gsdma3Q5Y4Y6 464 aa20.18■□□□□ 0.82
Col18a1-202ENSMUST00000081654 PnisrA2AJT4 805 aaKnown RBP20.18■□□□□ 0.82
Col18a1-202ENSMUST00000081654 Atp2b2Q9R0K7 1198 aa20.18■□□□□ 0.82
Col18a1-202ENSMUST00000081654 Ccdc141E9Q8Q6 1531 aa20.17■□□□□ 0.82
Col18a1-202ENSMUST00000081654 Gm14025A2AP89 1413 aa20.17■□□□□ 0.82
Col18a1-202ENSMUST00000081654 CadpsQ80TJ1 1355 aa20.17■□□□□ 0.82
Col18a1-202ENSMUST00000081654 Trim58Q5NCC9 485 aa20.16■□□□□ 0.82
Col18a1-202ENSMUST00000081654 Q9D9H8 365 aa20.16■□□□□ 0.82
Col18a1-202ENSMUST00000081654 Arap1Q4LDD4 1452 aa20.16■□□□□ 0.82
Col18a1-202ENSMUST00000081654 Gnai1B2RSH2 354 aa20.15■□□□□ 0.82
Col18a1-202ENSMUST00000081654 Gnai3Q9DC51 354 aa20.15■□□□□ 0.82
Col18a1-202ENSMUST00000081654 AU015836B2RUM3 263 aa20.13■□□□□ 0.81
Col18a1-202ENSMUST00000081654 Irx3P81067 507 aa20.13■□□□□ 0.81
Col18a1-202ENSMUST00000081654 EprsQ8CGC7 1512 aaKnown RBP20.12■□□□□ 0.81
Col18a1-202ENSMUST00000081654 Rpgrip1lQ8CG73 1264 aa20.12■□□□□ 0.81
Col18a1-202ENSMUST00000081654 Ccdc47Q9D024 483 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 22,080 RNA–protein pairs in 8.6 ms