RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 Ppip5k1A2ARP1 1436 aa9.16□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Ralbp1Q62172 648 aa9.16□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Golga2Q921M4 999 aa9.16□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Unc13aQ4KUS2 1712 aa9.16□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Psme1P97371 249 aa9.16□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Ankrd26Q811D2 1581 aa9.16□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Hspa5P20029 655 aaKnown RBP9.15□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Ncapd3Q6ZQK0 1506 aa9.15□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Magi1Q6RHR9 1471 aa9.15□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Myom3A2ABU4 1439 aa9.15□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Kif3bQ61771 747 aa9.15□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Ap3b2Q9JME5 1082 aa9.15□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Arap1Q4LDD4 1452 aa9.15□□□□□ -0.94
Scn3a-201ENSMUST00000066432 Dapk1Q80YE7 1442 aa9.15□□□□□ -0.95
Scn3a-201ENSMUST00000066432 EspnQ9ET47 871 aa9.15□□□□□ -0.95
Scn3a-201ENSMUST00000066432 Nol10Q5RJG1 687 aaKnown RBP9.14□□□□□ -0.95
Scn3a-201ENSMUST00000066432 Prdm10Q3UTQ7 1184 aa9.14□□□□□ -0.95
Scn3a-201ENSMUST00000066432 Grin2aP35436 1464 aa9.14□□□□□ -0.95
Scn3a-201ENSMUST00000066432 NgefQ8CHT1 710 aa9.14□□□□□ -0.95
Scn3a-201ENSMUST00000066432 NexmifQ5DTT1 1515 aa9.13□□□□□ -0.95
Scn3a-201ENSMUST00000066432 R3hcc1Q8BSI6 488 aa9.13□□□□□ -0.95
Scn3a-201ENSMUST00000066432 Kif1bQ60575 1816 aaKnown RBP9.13□□□□□ -0.95
Scn3a-201ENSMUST00000066432 Txndc2Q6P902 515 aa9.12□□□□□ -0.95
Scn3a-201ENSMUST00000066432 Wdr7Q920I9 1489 aa9.11□□□□□ -0.95
Scn3a-201ENSMUST00000066432 Casc1Q6TDU8 730 aa9.11□□□□□ -0.95
Scn3a-201ENSMUST00000066432 PnisrA2AJT4 805 aaKnown RBP9.11□□□□□ -0.95
Scn3a-201ENSMUST00000066432 DekQ7TNV0 380 aaKnown RBP9.1□□□□□ -0.95
Scn3a-201ENSMUST00000066432 Pes1Q9EQ61 584 aaKnown RBP9.1□□□□□ -0.95
Scn3a-201ENSMUST00000066432 WizO88286 1684 aaKnown RBP9.1□□□□□ -0.95
Scn3a-201ENSMUST00000066432 Tdrd9Q14BI7 1383 aa9.1□□□□□ -0.95
Scn3a-201ENSMUST00000066432 Gsdma3Q5Y4Y6 464 aa9.09□□□□□ -0.95
Scn3a-201ENSMUST00000066432 Mug1P28665 1476 aa9.09□□□□□ -0.95
Scn3a-201ENSMUST00000066432 Cd109Q8R422 1442 aa9.09□□□□□ -0.95
Scn3a-201ENSMUST00000066432 Rad54l2Q99NG0 1466 aa9.09□□□□□ -0.95
Scn3a-201ENSMUST00000066432 Tpm3-rs7D3Z2H9 248 aa9.09□□□□□ -0.95
Scn3a-201ENSMUST00000066432 MyclP10166 368 aa9.09□□□□□ -0.95
Scn3a-201ENSMUST00000066432 Ddx11Q6AXC6 880 aa9.08□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Abca5Q8K448 1642 aa9.08□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Calcoco2A2A6M5 331 aa9.08□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Hap1O35668 628 aa9.07□□□□□ -0.96
Scn3a-201ENSMUST00000066432 U2af1Q9D883 239 aaKnown RBP9.07□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Smc4Q8CG47 1286 aa9.07□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Chmp5Q9D7S9 219 aa9.07□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Thoc2B1AZI6 1594 aaKnown RBP9.07□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Ylpm1Q9R0I7 1386 aaKnown RBP9.07□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Ccdc47Q9D024 483 aaKnown RBP9.07□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Ccdc171E9Q1U1 1324 aa9.07□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Fam184bQ0KK56 942 aa9.07□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Fancd2Q80V62 1450 aa9.07□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Plppr3Q7TPB0 716 aa9.07□□□□□ -0.96
Scn3a-201ENSMUST00000066432 PtmaP26350 111 aa9.07□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Arhgef12Q8R4H2 1543 aaKnown RBP9.06□□□□□ -0.96
Scn3a-201ENSMUST00000066432 A2mQ6GQT1 1474 aa9.06□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Mapk8ip2Q9ERE9 830 aa9.06□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Plcd4Q8K3R3 807 aa9.06□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Arid3cA6PWV5 409 aa9.05□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Slc52a2Q9D8F3 450 aa9.05□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Plb1Q3TTY0 1478 aa9.05□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Csrnp3P59055 597 aa9.05□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Hsp90b1P08113 802 aaKnown RBP9.05□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Atl3Q91YH5 541 aa9.05□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Plekhh1Q80TI1 1356 aa9.05□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Aebp2Q9Z248 504 aaKnown RBP9.05□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Stk31Q99MW1 1018 aa9.05□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Chmp4cQ9D7F7 232 aa9.05□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Gsto1O09131 240 aa9.04□□□□□ -0.96
Scn3a-201ENSMUST00000066432 ScaperF8VQ70 1398 aaKnown RBP9.04□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Gnl3lQ6PGG6 577 aaKnown RBP9.04□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Gapvd1Q6PAR5 1458 aa9.04□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Kdm2bQ6P1G2 1309 aa9.04□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Lrriq1Q0P5X1 1673 aa9.04□□□□□ -0.96
Scn3a-201ENSMUST00000066432 OvosQ3UU35 1456 aa9.04□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Q3TQI7 289 aaKnown RBP9.03□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Dnai1Q8C0M8 701 aa9.03□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Zmym4A2A791 1549 aaKnown RBP9.03□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Scaf1Q5U4C3 1256 aaKnown RBP9.03□□□□□ -0.96
Scn3a-201ENSMUST00000066432 A0A1L1SQF0 893 aa9.03□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Utp14aQ640M1 767 aaKnown RBP9.03□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Speer4f1Q9D5Q6 258 aa9.03□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Rab3gap2Q8BMG7 1366 aa9.02□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Kif16bB1AVY7 1312 aa9.02□□□□□ -0.96
Scn3a-201ENSMUST00000066432 Hecw1Q8K4P8 1604 aa9.02□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Dcaf11Q91VU6 549 aa9.02□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Cald1E9QA15 768 aaKnown RBP9.02□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Kif3aP28741 701 aa9.02□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Mcm2P97310 904 aa9.02□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Cetn4Q8K4K1 168 aa9.01□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Talpid3E9PV87 1520 aa9.01□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Naip2Q9QUK4 1447 aa9.01□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Lmo7E9PYF4 1699 aaKnown RBP9.01□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Evc2Q8K1G2 1220 aa9.01□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Fmn2Q9JL04 1578 aa9.01□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Uggt2E9Q4X2 1504 aa9.01□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Gm1043A0A140LJC2 1431 aa9.01□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Ipo8Q7TMY7 1010 aa9.01□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Gimap6Q8K349 305 aa9.01□□□□□ -0.97
Scn3a-201ENSMUST00000066432 ZgpatQ8VDM1 511 aa9.01□□□□□ -0.97
Scn3a-201ENSMUST00000066432 PhaxQ9JJT9 385 aaKnown RBP9□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Adgrl2Q8JZZ7 1487 aa9□□□□□ -0.97
Scn3a-201ENSMUST00000066432 Kif7B7ZNG0 1348 aa9□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms