RNA–Protein interactions for RNA: ENSMUST00000056907.6

Smcr8-201, Transcript of Guanine nucleotide exchange protein SMCR8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smcr8, Length 7,391 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8-201ENSMUST00000056907 Znf704Q9ERQ3 566 aa11.68□□□□□ -0.54
Smcr8-201ENSMUST00000056907 Nup155Q99P88 1391 aaKnown RBP11.67□□□□□ -0.54
Smcr8-201ENSMUST00000056907 Ccar1Q8CH18 1146 aaKnown RBP11.66□□□□□ -0.54
Smcr8-201ENSMUST00000056907 R3hcc1Q8BSI6 488 aa11.66□□□□□ -0.54
Smcr8-201ENSMUST00000056907 Shq1Q7TMX5 569 aa11.66□□□□□ -0.54
Smcr8-201ENSMUST00000056907 Dnai1Q8C0M8 701 aa11.66□□□□□ -0.54
Smcr8-201ENSMUST00000056907 Mbd3Q9Z2D8 285 aaKnown RBP11.66□□□□□ -0.54
Smcr8-201ENSMUST00000056907 Baz1aO88379 1555 aa11.66□□□□□ -0.54
Smcr8-201ENSMUST00000056907 Mink1Q9JM52 1308 aa11.66□□□□□ -0.54
Smcr8-201ENSMUST00000056907 Tsen2Q6P7W5 460 aa11.65□□□□□ -0.54
Smcr8-201ENSMUST00000056907 Kiaa0754Q69ZZ9 979 aa11.65□□□□□ -0.54
Smcr8-201ENSMUST00000056907 Tnnt2P50752 301 aa11.65□□□□□ -0.54
Smcr8-201ENSMUST00000056907 Krt82Q99M74 516 aa11.65□□□□□ -0.54
Smcr8-201ENSMUST00000056907 Bcl2l13P59017 434 aa11.65□□□□□ -0.54
Smcr8-201ENSMUST00000056907 Ripply1Q2WG77 201 aa11.65□□□□□ -0.54
Smcr8-201ENSMUST00000056907 Srcin1Q9QWI6 1250 aa11.65□□□□□ -0.54
Smcr8-201ENSMUST00000056907 SlkO54988 1233 aa11.64□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Zscan21Q07231 555 aa11.64□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Ipo8Q7TMY7 1010 aa11.64□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Drc7Q6V3W6 876 aa11.63□□□□□ -0.55
Smcr8-201ENSMUST00000056907 CenpjQ569L8 1344 aa11.63□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Cald1E9QA15 768 aaKnown RBP11.63□□□□□ -0.55
Smcr8-201ENSMUST00000056907 MsnP26041 577 aaKnown RBP11.63□□□□□ -0.55
Smcr8-201ENSMUST00000056907 AcrbpQ3V140 540 aa11.63□□□□□ -0.55
Smcr8-201ENSMUST00000056907 ChgaP26339 463 aaKnown RBP11.63□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Stk31Q99MW1 1018 aa11.63□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Gm21190A0A0G2JGJ6 266 aa11.62□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Ccdc47Q9D024 483 aaKnown RBP11.62□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Polr3gQ6NXY9 223 aa11.62□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Ccdc96Q9CR92 584 aa11.62□□□□□ -0.55
Smcr8-201ENSMUST00000056907 IbspQ61711 324 aa11.61□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Pde3bQ61409 1100 aa11.61□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Calcoco2A2A6M5 331 aa11.61□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Baz1bQ9Z277 1479 aa11.61□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Neurod6P48986 337 aa11.61□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Gm21969J3QJZ1 289 aa11.61□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Smarce1O54941 411 aaKnown RBP11.6□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Taok2Q6ZQ29 1240 aa11.6□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Ccdc60Q8C4J0 545 aa11.6□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Pank3Q8R2W9 370 aa11.6□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Eva1cP58659 440 aa11.6□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Ccp110Q7TSH4 1004 aa11.6□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Ccdc43Q9CR29 222 aaKnown RBP11.6□□□□□ -0.55
Smcr8-201ENSMUST00000056907 AU015836B2RUM3 263 aa11.59□□□□□ -0.55
Smcr8-201ENSMUST00000056907 Tpm3P21107 285 aaKnown RBP11.58□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Sart1Q9Z315 806 aaKnown RBP11.58□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Fyb1O35601 819 aa11.57□□□□□ -0.56
Smcr8-201ENSMUST00000056907 RdxP26043 583 aaKnown RBP11.57□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Usp40Q8BWR4 1235 aa11.57□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Chmp7Q8R1T1 451 aa11.57□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Shroom4Q1W617 1475 aa11.57□□□□□ -0.56
Smcr8-201ENSMUST00000056907 A0A0U1RNP2 1173 aa11.57□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Tceal9Q9DD24 104 aa11.56□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Odf2A3KGV1 830 aaKnown RBP11.56□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Tpm4Q6IRU2 248 aa11.56□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Arhgap35Q91YM2 1499 aa11.55□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Triml2E9PW10 424 aa11.55□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Abl1P00520 1123 aa11.55□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Gabpb2P81069 414 aa11.55□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Sf3b2Q3UJB0 878 aaKnown RBP11.55□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Sf3a1Q8K4Z5 791 aaKnown RBP11.55□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Inpp5dQ9ES52 1191 aa11.55□□□□□ -0.56
Smcr8-201ENSMUST00000056907 MycnP03966 462 aaKnown RBP11.55□□□□□ -0.56
Smcr8-201ENSMUST00000056907 SetQ9EQU5 289 aaKnown RBP11.55□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Irx3P81067 507 aa11.54□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Sugp2Q8CH09 1067 aa11.54□□□□□ -0.56
Smcr8-201ENSMUST00000056907 PtmsQ9D0J8 101 aaKnown RBP11.54□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Plekhh2Q8C115 1491 aa11.54□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Nutm1Q8BHP2 1126 aa11.53□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Fyco1Q8VDC1 1437 aa11.53□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Ipo9Q91YE6 1041 aa11.53□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Nectin2P32507 530 aa11.53□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Rbm5Q91YE7 815 aaKnown RBP11.53□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Ftsj3Q9DBE9 838 aaKnown RBP11.53□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Rfx1P48377 963 aa11.53□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Zpr1Q62384 459 aa11.53□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Trim30aP15533 496 aa11.52□□□□□ -0.56
Smcr8-201ENSMUST00000056907 Tpm2P58774 284 aa11.52□□□□□ -0.57
Smcr8-201ENSMUST00000056907 Ccdc88bQ4QRL3 1481 aa11.52□□□□□ -0.57
Smcr8-201ENSMUST00000056907 Gtf2f1Q3THK3 508 aaKnown RBP11.51□□□□□ -0.57
Smcr8-201ENSMUST00000056907 Rad54l2Q99NG0 1466 aa11.51□□□□□ -0.57
Smcr8-201ENSMUST00000056907 Kdm5dQ62240 1548 aa11.51□□□□□ -0.57
Smcr8-201ENSMUST00000056907 Ddx54Q8K4L0 874 aaKnown RBP11.51□□□□□ -0.57
Smcr8-201ENSMUST00000056907 G3bp1P97855 465 aaKnown RBP11.5□□□□□ -0.57
Smcr8-201ENSMUST00000056907 Smc4Q8CG47 1286 aa11.5□□□□□ -0.57
Smcr8-201ENSMUST00000056907 Phactr2B1AVP0 632 aa11.5□□□□□ -0.57
Smcr8-201ENSMUST00000056907 Evi5lH3BKQ3 813 aa11.5□□□□□ -0.57
Smcr8-201ENSMUST00000056907 Hmox1P14901 289 aa11.5□□□□□ -0.57
Smcr8-201ENSMUST00000056907 CrcpO35427 148 aa11.5□□□□□ -0.57
Smcr8-201ENSMUST00000056907 Sirt1Q923E4 737 aa11.5□□□□□ -0.57
Smcr8-201ENSMUST00000056907 Cux2P70298 1426 aa11.5□□□□□ -0.57
Smcr8-201ENSMUST00000056907 Kif7B7ZNG0 1348 aa11.5□□□□□ -0.57
Smcr8-201ENSMUST00000056907 Kdm4aQ8BW72 1064 aa11.5□□□□□ -0.57
Smcr8-201ENSMUST00000056907 Atf3Q60765 181 aa11.49□□□□□ -0.57
Smcr8-201ENSMUST00000056907 March6Q6ZQ89 909 aa11.49□□□□□ -0.57
Smcr8-201ENSMUST00000056907 Nap1l3Q794H2 544 aa11.49□□□□□ -0.57
Smcr8-201ENSMUST00000056907 Utp3Q9JI13 469 aaKnown RBP11.49□□□□□ -0.57
Smcr8-201ENSMUST00000056907 Stk3Q9JI10 497 aa11.49□□□□□ -0.57
Smcr8-201ENSMUST00000056907 Cep162Q6ZQ06 1403 aa11.49□□□□□ -0.57
Smcr8-201ENSMUST00000056907 Usp16Q99LG0 825 aa11.49□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms