RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 CgnP59242 1191 aa11.05□□□□□ -0.64
Ttc28-201ENSMUST00000040111 LrpprcQ6PB66 1392 aaKnown RBP11.05□□□□□ -0.64
Ttc28-201ENSMUST00000040111 CntlnA2AM05 1397 aa11.05□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Nolc1E9Q5C9 702 aaKnown RBP11.05□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Pcmtd1P59913 357 aa11.05□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Calcoco2A2A6M5 331 aa11.05□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Zscan21Q07231 555 aa11.04□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Casc1Q6TDU8 730 aa11.04□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Sytl4Q9R0Q1 673 aa11.04□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Klf15Q9EPW2 415 aa11.04□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Cc2d2bA0A286YDU8 1405 aa11.04□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Plekhh2Q8C115 1491 aa11.04□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Mak16Q8BGS0 296 aaKnown RBP11.03□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Jph4Q80WT0 628 aa11.03□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Dnajc5bQ9CQ94 199 aa11.03□□□□□ -0.64
Ttc28-201ENSMUST00000040111 CrebrfQ8CDG5 640 aaKnown RBP11.03□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Gtf3c3Q3TMP1 882 aa11.03□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Ap3b2Q9JME5 1082 aa11.03□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Spag9Q58A65 1321 aaKnown RBP11.03□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Kif7B7ZNG0 1348 aa11.02□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Map7O88735 730 aa11.02□□□□□ -0.64
Ttc28-201ENSMUST00000040111 Soga1E1U8D0 1418 aa11.02□□□□□ -0.65
Ttc28-201ENSMUST00000040111 Stk11ipQ3TAA7 1072 aa11.02□□□□□ -0.65
Ttc28-201ENSMUST00000040111 Chmp5Q9D7S9 219 aa11.02□□□□□ -0.65
Ttc28-201ENSMUST00000040111 Ccdc60Q8C4J0 545 aa11.02□□□□□ -0.65
Ttc28-201ENSMUST00000040111 Nol10Q5RJG1 687 aaKnown RBP11.01□□□□□ -0.65
Ttc28-201ENSMUST00000040111 AU015836B2RUM3 263 aa11.01□□□□□ -0.65
Ttc28-201ENSMUST00000040111 BcanQ61361 883 aa11.01□□□□□ -0.65
Ttc28-201ENSMUST00000040111 MsnP26041 577 aaKnown RBP11.01□□□□□ -0.65
Ttc28-201ENSMUST00000040111 CenpjQ569L8 1344 aa11□□□□□ -0.65
Ttc28-201ENSMUST00000040111 Samd1D3YXK1 519 aa11□□□□□ -0.65
Ttc28-201ENSMUST00000040111 Triml2E9PW10 424 aa10.99□□□□□ -0.65
Ttc28-201ENSMUST00000040111 ScribQ80U72 1612 aa10.99□□□□□ -0.65
Ttc28-201ENSMUST00000040111 Eif2s2Q99L45 331 aaKnown RBP10.98□□□□□ -0.65
Ttc28-201ENSMUST00000040111 Q4VA45 678 aa10.98□□□□□ -0.65
Ttc28-201ENSMUST00000040111 Urb2E9Q7L1 1524 aaKnown RBP10.98□□□□□ -0.65
Ttc28-201ENSMUST00000040111 Stk31Q99MW1 1018 aa10.98□□□□□ -0.65
Ttc28-201ENSMUST00000040111 MpripP97434 1024 aa10.98□□□□□ -0.65
Ttc28-201ENSMUST00000040111 AppP12023 770 aa10.97□□□□□ -0.65
Ttc28-201ENSMUST00000040111 Ipo9Q91YE6 1041 aa10.97□□□□□ -0.65
Ttc28-201ENSMUST00000040111 Dnai1Q8C0M8 701 aa10.97□□□□□ -0.65
Ttc28-201ENSMUST00000040111 Fyb1O35601 819 aa10.97□□□□□ -0.65
Ttc28-201ENSMUST00000040111 Pde4cQ3UEI1 686 aa10.97□□□□□ -0.65
Ttc28-201ENSMUST00000040111 Atad2bE9Q166 1460 aaKnown RBP10.97□□□□□ -0.65
Ttc28-201ENSMUST00000040111 Wdr78E9PYY5 807 aa10.96□□□□□ -0.65
Ttc28-201ENSMUST00000040111 MecomP14404 1042 aa10.96□□□□□ -0.65
Ttc28-201ENSMUST00000040111 Afap1Q80YS6 731 aa10.96□□□□□ -0.65
Ttc28-201ENSMUST00000040111 Pknox2Q8BG99 474 aa10.96□□□□□ -0.65
Ttc28-201ENSMUST00000040111 Ddx54Q8K4L0 874 aaKnown RBP10.96□□□□□ -0.65
Ttc28-201ENSMUST00000040111 Q7TT23 1179 aa10.95□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Rpgrip1lQ8CG73 1264 aa10.95□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Sugp2Q8CH09 1067 aa10.95□□□□□ -0.66
Ttc28-201ENSMUST00000040111 PrkcshO08795 521 aa10.95□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Pank1Q8K4K6 548 aa10.95□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Iffo2Q8R2V2 512 aa10.94□□□□□ -0.66
Ttc28-201ENSMUST00000040111 SetQ9EQU5 289 aaKnown RBP10.94□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Gm10471E9Q1C7 252 aa10.94□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Fam184bQ0KK56 942 aa10.94□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Gm973E9Q295 1059 aa10.94□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Fnbp4Q6ZQ03 1031 aa10.94□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Chmp4bQ9D8B3 224 aaKnown RBP10.94□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Kcnh8P59111 1102 aa10.93□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Puf60Q3UEB3 564 aaKnown RBP10.93□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Dhx9O70133 1380 aaKnown RBP10.93□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Sart3Q9JLI8 962 aaKnown RBP10.93□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Ccar1Q8CH18 1146 aaKnown RBP10.92□□□□□ -0.66
Ttc28-201ENSMUST00000040111 SlkO54988 1233 aa10.92□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Gpatch11Q3UFS4 262 aa10.92□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Tomm22Q9CPQ3 142 aa10.92□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Atp2b2Q9R0K7 1198 aa10.92□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Neurod6P48986 337 aa10.91□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Rrp12Q6P5B0 1295 aaKnown RBP10.91□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Smarca4Q3TKT4 1613 aaKnown RBP10.91□□□□□ -0.66
Ttc28-201ENSMUST00000040111 IbspQ61711 324 aa10.91□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Rfx1P48377 963 aa10.91□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Larp1bA0A0A6YXJ7 370 aaKnown RBP10.91□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Nol12Q8BG17 217 aa10.91□□□□□ -0.66
Ttc28-201ENSMUST00000040111 KnstrnQ9D9Z1 312 aaKnown RBP10.9□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Kiaa0754Q69ZZ9 979 aa10.9□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Sall3Q62255 1320 aa10.9□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Isy1Q69ZQ2 285 aaKnown RBP10.9□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Zranb3Q6NZP1 1069 aa10.9□□□□□ -0.66
Ttc28-201ENSMUST00000040111 Acsbg1Q99PU5 721 aa10.9□□□□□ -0.67
Ttc28-201ENSMUST00000040111 MccE9PWI3 1003 aa10.89□□□□□ -0.67
Ttc28-201ENSMUST00000040111 G3bp1P97855 465 aaKnown RBP10.89□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Zscan10Q3URR7 782 aa10.89□□□□□ -0.67
Ttc28-201ENSMUST00000040111 PtmsQ9D0J8 101 aaKnown RBP10.89□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Dapk1Q80YE7 1442 aa10.89□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Podxl2Q8CAE9 603 aa10.89□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Mbd3Q9Z2D8 285 aaKnown RBP10.89□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Znf704Q9ERQ3 566 aa10.89□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Ttll5Q8CHB8 1328 aa10.89□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Kdm4aQ8BW72 1064 aa10.89□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Dhx57Q6P5D3 1388 aaKnown RBP10.89□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Usp16Q99LG0 825 aa10.89□□□□□ -0.67
Ttc28-201ENSMUST00000040111 EspnQ9ET47 871 aa10.89□□□□□ -0.67
Ttc28-201ENSMUST00000040111 HnrnpuQ8VEK3 800 aaKnown RBP10.89□□□□□ -0.67
Ttc28-201ENSMUST00000040111 GsdmaQ9EST1 446 aa10.88□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Apaf1O88879 1249 aa10.87□□□□□ -0.67
Ttc28-201ENSMUST00000040111 Polr3gQ6NXY9 223 aa10.87□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms