RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Htatsf1Q8BGC0 757 aa19.54■□□□□ 0.72
Usp4-201ENSMUST00000035237 SynmQ70IV5 1561 aa19.53■□□□□ 0.72
Usp4-201ENSMUST00000035237 Ipo4Q8VI75 1082 aa19.53■□□□□ 0.72
Usp4-201ENSMUST00000035237 Ak7Q9D2H2 614 aa19.53■□□□□ 0.72
Usp4-201ENSMUST00000035237 Dnttip2Q8R2M2 758 aaKnown RBP19.52■□□□□ 0.72
Usp4-201ENSMUST00000035237 Tmf1B9EKI3 1091 aa19.52■□□□□ 0.72
Usp4-201ENSMUST00000035237 Peg3Q3URU2 1571 aa19.52■□□□□ 0.71
Usp4-201ENSMUST00000035237 Pik3c2gO70167 1506 aa19.5■□□□□ 0.71
Usp4-201ENSMUST00000035237 Kif16bB1AVY7 1312 aa19.5■□□□□ 0.71
Usp4-201ENSMUST00000035237 AU015836B2RUM3 263 aa19.49■□□□□ 0.71
Usp4-201ENSMUST00000035237 Tdrd9Q14BI7 1383 aa19.49■□□□□ 0.71
Usp4-201ENSMUST00000035237 Zscan10Q3URR7 782 aa19.49■□□□□ 0.71
Usp4-201ENSMUST00000035237 Gpatch8A2A6A1 1505 aa19.49■□□□□ 0.71
Usp4-201ENSMUST00000035237 Soga1E1U8D0 1418 aa19.48■□□□□ 0.71
Usp4-201ENSMUST00000035237 Rfx7F8VPJ6 1459 aa19.48■□□□□ 0.71
Usp4-201ENSMUST00000035237 BC005561E9Q5E2 1589 aa19.48■□□□□ 0.71
Usp4-201ENSMUST00000035237 Dcaf11Q91VU6 549 aa19.46■□□□□ 0.71
Usp4-201ENSMUST00000035237 Cc2d2bA0A286YDU8 1405 aa19.46■□□□□ 0.71
Usp4-201ENSMUST00000035237 Mapk8ip3Q9ESN9 1337 aa19.46■□□□□ 0.71
Usp4-201ENSMUST00000035237 Vsig10D3YX43 558 aa19.46■□□□□ 0.71
Usp4-201ENSMUST00000035237 Nkx1-2P42580 305 aa19.45■□□□□ 0.7
Usp4-201ENSMUST00000035237 Myom3A2ABU4 1439 aa19.44■□□□□ 0.7
Usp4-201ENSMUST00000035237 Samd9lQ69Z37 1561 aa19.44■□□□□ 0.7
Usp4-201ENSMUST00000035237 Dhx57Q6P5D3 1388 aaKnown RBP19.44■□□□□ 0.7
Usp4-201ENSMUST00000035237 Cnga1P29974 684 aa19.43■□□□□ 0.7
Usp4-201ENSMUST00000035237 Lmtk2Q3TYD6 1471 aa19.42■□□□□ 0.7
Usp4-201ENSMUST00000035237 Cul7Q8VE73 1689 aa19.41■□□□□ 0.7
Usp4-201ENSMUST00000035237 DekQ7TNV0 380 aaKnown RBP19.4■□□□□ 0.7
Usp4-201ENSMUST00000035237 Mug2P28666 1451 aa19.4■□□□□ 0.7
Usp4-201ENSMUST00000035237 Plcb2A3KGF7 1181 aa19.4■□□□□ 0.7
Usp4-201ENSMUST00000035237 Srcin1Q9QWI6 1250 aa19.4■□□□□ 0.7
Usp4-201ENSMUST00000035237 Taok2Q6ZQ29 1240 aa19.39■□□□□ 0.69
Usp4-201ENSMUST00000035237 Ccdc30Q8BVF4 654 aa19.39■□□□□ 0.69
Usp4-201ENSMUST00000035237 Cluap1Q8R3P7 413 aa19.39■□□□□ 0.69
Usp4-201ENSMUST00000035237 Golga2Q921M4 999 aa19.39■□□□□ 0.69
Usp4-201ENSMUST00000035237 Znf692Q3U381 531 aa19.38■□□□□ 0.69
Usp4-201ENSMUST00000035237 Pank1Q8K4K6 548 aa19.38■□□□□ 0.69
Usp4-201ENSMUST00000035237 Il16O54824 1322 aa19.38■□□□□ 0.69
Usp4-201ENSMUST00000035237 Ccdc183A2AJB1 534 aa19.38■□□□□ 0.69
Usp4-201ENSMUST00000035237 Gm20521D3Z5F7 333 aa19.38■□□□□ 0.69
Usp4-201ENSMUST00000035237 PrxO55103 1391 aa19.37■□□□□ 0.69
Usp4-201ENSMUST00000035237 Ppp2r1aQ76MZ3 589 aa19.36■□□□□ 0.69
Usp4-201ENSMUST00000035237 Tspyl2Q7TQI8 677 aa19.36■□□□□ 0.69
Usp4-201ENSMUST00000035237 KarsQ99MN1 595 aaKnown RBP19.36■□□□□ 0.69
Usp4-201ENSMUST00000035237 Naip6Q9JIB6 1403 aa19.35■□□□□ 0.69
Usp4-201ENSMUST00000035237 Ncoa3O09000 1398 aa19.35■□□□□ 0.69
Usp4-201ENSMUST00000035237 Plekhh1Q80TI1 1356 aa19.34■□□□□ 0.69
Usp4-201ENSMUST00000035237 Rtn4Q99P72 1162 aaKnown RBP19.34■□□□□ 0.69
Usp4-201ENSMUST00000035237 Cdk13Q69ZA1 1511 aaKnown RBP19.33■□□□□ 0.68
Usp4-201ENSMUST00000035237 Fam184bQ0KK56 942 aa19.32■□□□□ 0.68
Usp4-201ENSMUST00000035237 Adgrb2Q8CGM1 1561 aa19.32■□□□□ 0.68
Usp4-201ENSMUST00000035237 Mfap1aC0HKD8 439 aaKnown RBP19.32■□□□□ 0.68
Usp4-201ENSMUST00000035237 Mfap1bC0HKD9 439 aaKnown RBP19.32■□□□□ 0.68
Usp4-201ENSMUST00000035237 Arhgef40Q3UPH7 1517 aa19.32■□□□□ 0.68
Usp4-201ENSMUST00000035237 Ecm2Q5FW85 670 aa19.31■□□□□ 0.68
Usp4-201ENSMUST00000035237 Smc5Q8CG46 1101 aaKnown RBP19.31■□□□□ 0.68
Usp4-201ENSMUST00000035237 Kif7B7ZNG0 1348 aa19.3■□□□□ 0.68
Usp4-201ENSMUST00000035237 Trim44Q9QXA7 346 aa19.3■□□□□ 0.68
Usp4-201ENSMUST00000035237 Pdcl3Q8BVF2 240 aa19.29■□□□□ 0.68
Usp4-201ENSMUST00000035237 Wdr7Q920I9 1489 aa19.28■□□□□ 0.68
Usp4-201ENSMUST00000035237 Stk24Q99KH8 431 aa19.28■□□□□ 0.68
Usp4-201ENSMUST00000035237 Sart1Q9Z315 806 aaKnown RBP19.27■□□□□ 0.68
Usp4-201ENSMUST00000035237 Srpk2O54781 681 aaKnown RBP19.26■□□□□ 0.67
Usp4-201ENSMUST00000035237 Tnpo1Q8BFY9 898 aaKnown RBP19.26■□□□□ 0.67
Usp4-201ENSMUST00000035237 Fhod3Q76LL6 1578 aa19.25■□□□□ 0.67
Usp4-201ENSMUST00000035237 Arhgap31A6X8Z5 1425 aa19.25■□□□□ 0.67
Usp4-201ENSMUST00000035237 RalgapbQ8BQZ4 1484 aa19.24■□□□□ 0.67
Usp4-201ENSMUST00000035237 Polr3aB2RXC6 1390 aa19.23■□□□□ 0.67
Usp4-201ENSMUST00000035237 Zmym4A2A791 1549 aaKnown RBP19.23■□□□□ 0.67
Usp4-201ENSMUST00000035237 Mink1Q9JM52 1308 aa19.23■□□□□ 0.67
Usp4-201ENSMUST00000035237 Ksr2Q3UVC0 959 aa19.23■□□□□ 0.67
Usp4-201ENSMUST00000035237 Znf330Q922H9 316 aa19.23■□□□□ 0.67
Usp4-201ENSMUST00000035237 Kdm2bQ6P1G2 1309 aa19.23■□□□□ 0.67
Usp4-201ENSMUST00000035237 Pla2r1Q62028 1487 aa19.22■□□□□ 0.67
Usp4-201ENSMUST00000035237 Gtf2e1Q9D0D5 440 aa19.22■□□□□ 0.67
Usp4-201ENSMUST00000035237 Asxl1P59598 1514 aa19.22■□□□□ 0.67
Usp4-201ENSMUST00000035237 Rab3gap2Q8BMG7 1366 aa19.22■□□□□ 0.67
Usp4-201ENSMUST00000035237 Ppp1r9bQ6R891 817 aaKnown RBP19.2■□□□□ 0.66
Usp4-201ENSMUST00000035237 SlkO54988 1233 aa19.2■□□□□ 0.66
Usp4-201ENSMUST00000035237 Arhgef12Q8R4H2 1543 aaKnown RBP19.2■□□□□ 0.66
Usp4-201ENSMUST00000035237 Cd109Q8R422 1442 aa19.2■□□□□ 0.66
Usp4-201ENSMUST00000035237 TnikP83510 1323 aa19.19■□□□□ 0.66
Usp4-201ENSMUST00000035237 Trim58Q5NCC9 485 aa19.19■□□□□ 0.66
Usp4-201ENSMUST00000035237 Grin2aP35436 1464 aa19.18■□□□□ 0.66
Usp4-201ENSMUST00000035237 Kdm3bQ6ZPY7 1562 aa19.18■□□□□ 0.66
Usp4-201ENSMUST00000035237 AlkP97793 1621 aa19.17■□□□□ 0.66
Usp4-201ENSMUST00000035237 Gcc2Q8CHG3 1679 aa19.17■□□□□ 0.66
Usp4-201ENSMUST00000035237 Fan1Q69ZT1 1020 aa19.17■□□□□ 0.66
Usp4-201ENSMUST00000035237 Setbp1Q9Z180 1582 aa19.17■□□□□ 0.66
Usp4-201ENSMUST00000035237 Ralbp1Q62172 648 aa19.16■□□□□ 0.66
Usp4-201ENSMUST00000035237 Atp1b4Q99ME6 356 aa19.16■□□□□ 0.66
Usp4-201ENSMUST00000035237 U2af1Q9D883 239 aaKnown RBP19.16■□□□□ 0.66
Usp4-201ENSMUST00000035237 PxdnQ3UQ28 1475 aa19.15■□□□□ 0.66
Usp4-201ENSMUST00000035237 Unc13aQ4KUS2 1712 aa19.15■□□□□ 0.66
Usp4-201ENSMUST00000035237 Ylpm1Q9R0I7 1386 aaKnown RBP19.15■□□□□ 0.66
Usp4-201ENSMUST00000035237 Rabep1O35551 862 aa19.14■□□□□ 0.66
Usp4-201ENSMUST00000035237 Rfx1P48377 963 aa19.14■□□□□ 0.65
Usp4-201ENSMUST00000035237 Kif14L0N7N1 1674 aaKnown RBP19.14■□□□□ 0.65
Usp4-201ENSMUST00000035237 WizO88286 1684 aaKnown RBP19.14■□□□□ 0.65
Usp4-201ENSMUST00000035237 Sptbn5F6UCX4 1208 aa19.14■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms