RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 Smc5Q8CG46 1101 aaKnown RBP17.3■□□□□ 0.36
Vps35-201ENSMUST00000034131 Naip6Q9JIB6 1403 aa17.3■□□□□ 0.36
Vps35-201ENSMUST00000034131 NgefQ8CHT1 710 aa17.3■□□□□ 0.36
Vps35-201ENSMUST00000034131 Mtus2Q3UHD3 1353 aa17.29■□□□□ 0.36
Vps35-201ENSMUST00000034131 Lmtk2Q3TYD6 1471 aa17.29■□□□□ 0.36
Vps35-201ENSMUST00000034131 Abca5Q8K448 1642 aa17.28■□□□□ 0.36
Vps35-201ENSMUST00000034131 CrbnQ8C7D2 445 aa17.27■□□□□ 0.36
Vps35-201ENSMUST00000034131 Esx1O88933 382 aa17.26■□□□□ 0.35
Vps35-201ENSMUST00000034131 Kif27Q7M6Z4 1394 aa17.26■□□□□ 0.35
Vps35-201ENSMUST00000034131 Ccdc183A2AJB1 534 aa17.26■□□□□ 0.35
Vps35-201ENSMUST00000034131 Paxip1Q6NZQ4 1056 aa17.26■□□□□ 0.35
Vps35-201ENSMUST00000034131 Dhx9O70133 1380 aaKnown RBP17.26■□□□□ 0.35
Vps35-201ENSMUST00000034131 Dcaf11Q91VU6 549 aa17.25■□□□□ 0.35
Vps35-201ENSMUST00000034131 Kif21aQ9QXL2 1672 aa17.25■□□□□ 0.35
Vps35-201ENSMUST00000034131 Mug2P28666 1451 aa17.24■□□□□ 0.35
Vps35-201ENSMUST00000034131 Kif16bB1AVY7 1312 aa17.24■□□□□ 0.35
Vps35-201ENSMUST00000034131 Plekhh2Q8C115 1491 aa17.23■□□□□ 0.35
Vps35-201ENSMUST00000034131 Tmc1Q8R4P5 757 aa17.23■□□□□ 0.35
Vps35-201ENSMUST00000034131 Rrp12Q6P5B0 1295 aaKnown RBP17.22■□□□□ 0.35
Vps35-201ENSMUST00000034131 Trak1Q6PD31 939 aa17.22■□□□□ 0.35
Vps35-201ENSMUST00000034131 Rock1P70335 1354 aa17.21■□□□□ 0.35
Vps35-201ENSMUST00000034131 Zmym4A2A791 1549 aaKnown RBP17.2■□□□□ 0.34
Vps35-201ENSMUST00000034131 Abcc5Q9R1X5 1436 aa17.2■□□□□ 0.34
Vps35-201ENSMUST00000034131 Ak9G3UYQ4 1894 aa17.2■□□□□ 0.34
Vps35-201ENSMUST00000034131 Polr1aO35134 1717 aaKnown RBP17.2■□□□□ 0.34
Vps35-201ENSMUST00000034131 Zmym3Q9JLM4 1370 aa17.19■□□□□ 0.34
Vps35-201ENSMUST00000034131 Mbd5B1AYB6 1498 aa17.19■□□□□ 0.34
Vps35-201ENSMUST00000034131 Plekhh1Q80TI1 1356 aa17.18■□□□□ 0.34
Vps35-201ENSMUST00000034131 Armcx1Q9CX83 456 aa17.18■□□□□ 0.34
Vps35-201ENSMUST00000034131 Soga1E1U8D0 1418 aa17.18■□□□□ 0.34
Vps35-201ENSMUST00000034131 NexmifQ5DTT1 1515 aa17.18■□□□□ 0.34
Vps35-201ENSMUST00000034131 Kif21bQ9QXL1 1668 aa17.17■□□□□ 0.34
Vps35-201ENSMUST00000034131 Arhgef12Q8R4H2 1543 aaKnown RBP17.17■□□□□ 0.34
Vps35-201ENSMUST00000034131 Lrriq1Q0P5X1 1673 aa17.17■□□□□ 0.34
Vps35-201ENSMUST00000034131 Ttc41Q692V3 1318 aa17.17■□□□□ 0.34
Vps35-201ENSMUST00000034131 Trim44Q9QXA7 346 aa17.16■□□□□ 0.34
Vps35-201ENSMUST00000034131 Pank3Q8R2W9 370 aa17.16■□□□□ 0.34
Vps35-201ENSMUST00000034131 Sptbn5F6UCX4 1208 aa17.15■□□□□ 0.34
Vps35-201ENSMUST00000034131 Tnpo1Q8BFY9 898 aaKnown RBP17.14■□□□□ 0.33
Vps35-201ENSMUST00000034131 Inpp5dQ9ES52 1191 aa17.13■□□□□ 0.33
Vps35-201ENSMUST00000034131 LrpprcQ6PB66 1392 aaKnown RBP17.13■□□□□ 0.33
Vps35-201ENSMUST00000034131 Mcm4P49717 862 aa17.13■□□□□ 0.33
Vps35-201ENSMUST00000034131 Neurod2Q62414 383 aa17.13■□□□□ 0.33
Vps35-201ENSMUST00000034131 Speer4f1Q9D5Q6 258 aa17.13■□□□□ 0.33
Vps35-201ENSMUST00000034131 RalgapbQ8BQZ4 1484 aa17.13■□□□□ 0.33
Vps35-201ENSMUST00000034131 Ttll5Q8CHB8 1328 aa17.12■□□□□ 0.33
Vps35-201ENSMUST00000034131 Arid4bA2CG63 1314 aaKnown RBP17.11■□□□□ 0.33
Vps35-201ENSMUST00000034131 Duox2A2AQ99 1517 aa17.11■□□□□ 0.33
Vps35-201ENSMUST00000034131 Tspyl2Q7TQI8 677 aa17.11■□□□□ 0.33
Vps35-201ENSMUST00000034131 Cdk13Q69ZA1 1511 aaKnown RBP17.1■□□□□ 0.33
Vps35-201ENSMUST00000034131 Il4rP16382 810 aa17.1■□□□□ 0.33
Vps35-201ENSMUST00000034131 PogkQ80TC5 607 aa17.09■□□□□ 0.33
Vps35-201ENSMUST00000034131 KarsQ99MN1 595 aaKnown RBP17.09■□□□□ 0.33
Vps35-201ENSMUST00000034131 Plcb2A3KGF7 1181 aa17.09■□□□□ 0.33
Vps35-201ENSMUST00000034131 Gcc2Q8CHG3 1679 aa17.09■□□□□ 0.33
Vps35-201ENSMUST00000034131 Rabep1O35551 862 aa17.08■□□□□ 0.33
Vps35-201ENSMUST00000034131 Antxr1Q9CZ52 562 aa17.08■□□□□ 0.33
Vps35-201ENSMUST00000034131 BC005561E9Q5E2 1589 aa17.08■□□□□ 0.32
Vps35-201ENSMUST00000034131 Kif14L0N7N1 1674 aaKnown RBP17.08■□□□□ 0.32
Vps35-201ENSMUST00000034131 Dusp27Q148W8 1138 aa17.07■□□□□ 0.32
Vps35-201ENSMUST00000034131 Zscan10Q3URR7 782 aa17.07■□□□□ 0.32
Vps35-201ENSMUST00000034131 Ssh1Q76I79 1042 aa17.07■□□□□ 0.32
Vps35-201ENSMUST00000034131 Gpatch8A2A6A1 1505 aa17.06■□□□□ 0.32
Vps35-201ENSMUST00000034131 Ddrgk1Q80WW9 315 aa17.06■□□□□ 0.32
Vps35-201ENSMUST00000034131 Lamc1P02468 1607 aaKnown RBP17.06■□□□□ 0.32
Vps35-201ENSMUST00000034131 Tex2Q6ZPJ0 1128 aaKnown RBP17.06■□□□□ 0.32
Vps35-201ENSMUST00000034131 Il16O54824 1322 aa17.06■□□□□ 0.32
Vps35-201ENSMUST00000034131 PogzQ8BZH4 1409 aaKnown RBP17.05■□□□□ 0.32
Vps35-201ENSMUST00000034131 SlkO54988 1233 aa17.05■□□□□ 0.32
Vps35-201ENSMUST00000034131 Ccdc30Q8BVF4 654 aa17.05■□□□□ 0.32
Vps35-201ENSMUST00000034131 PrxO55103 1391 aa17.05■□□□□ 0.32
Vps35-201ENSMUST00000034131 Map3k4O08648 1597 aa17.04■□□□□ 0.32
Vps35-201ENSMUST00000034131 Wdr7Q920I9 1489 aa17.04■□□□□ 0.32
Vps35-201ENSMUST00000034131 Tpm2P58774 284 aa17.04■□□□□ 0.32
Vps35-201ENSMUST00000034131 Plb1Q3TTY0 1478 aa17.04■□□□□ 0.32
Vps35-201ENSMUST00000034131 Tmf1B9EKI3 1091 aa17.04■□□□□ 0.32
Vps35-201ENSMUST00000034131 Polr3aB2RXC6 1390 aa17.02■□□□□ 0.32
Vps35-201ENSMUST00000034131 Pank1Q8K4K6 548 aa17.02■□□□□ 0.32
Vps35-201ENSMUST00000034131 Rad54l2Q99NG0 1466 aa17.02■□□□□ 0.32
Vps35-201ENSMUST00000034131 Ppp2r3aB2RXC8 1150 aa17.02■□□□□ 0.32
Vps35-201ENSMUST00000034131 Cpsf1Q9EPU4 1441 aaKnown RBP17.02■□□□□ 0.31
Vps35-201ENSMUST00000034131 Asxl1P59598 1514 aa17.02■□□□□ 0.31
Vps35-201ENSMUST00000034131 IbspQ61711 324 aa17.01■□□□□ 0.31
Vps35-201ENSMUST00000034131 Ppp2r1aQ76MZ3 589 aa17.01■□□□□ 0.31
Vps35-201ENSMUST00000034131 Nup155Q99P88 1391 aaKnown RBP17.01■□□□□ 0.31
Vps35-201ENSMUST00000034131 DroshaQ5HZJ0 1373 aaKnown RBP17.01■□□□□ 0.31
Vps35-201ENSMUST00000034131 Nlrp6Q91WS2 869 aa17.01■□□□□ 0.31
Vps35-201ENSMUST00000034131 AlkP97793 1621 aa17.01■□□□□ 0.31
Vps35-201ENSMUST00000034131 CadpsQ80TJ1 1355 aa17■□□□□ 0.31
Vps35-201ENSMUST00000034131 Chrna2Q91X60 512 aa17■□□□□ 0.31
Vps35-201ENSMUST00000034131 Clcn1Q64347 994 aa17■□□□□ 0.31
Vps35-201ENSMUST00000034131 Samd9lQ69Z37 1561 aa16.99■□□□□ 0.31
Vps35-201ENSMUST00000034131 Map4P27546 1125 aaKnown RBP16.99■□□□□ 0.31
Vps35-201ENSMUST00000034131 Isy1Q69ZQ2 285 aaKnown RBP16.98■□□□□ 0.31
Vps35-201ENSMUST00000034131 DekQ7TNV0 380 aaKnown RBP16.98■□□□□ 0.31
Vps35-201ENSMUST00000034131 Rbm10Q99KG3 930 aaKnown RBP16.98■□□□□ 0.31
Vps35-201ENSMUST00000034131 Adgrb2Q8CGM1 1561 aa16.98■□□□□ 0.31
Vps35-201ENSMUST00000034131 Tex14Q7M6U3 1450 aa16.98■□□□□ 0.31
Vps35-201ENSMUST00000034131 Catsper2A2ARP9 588 aa16.98■□□□□ 0.31
Vps35-201ENSMUST00000034131 Kdm3bQ6ZPY7 1562 aa16.97■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms