RNA–Protein interactions for RNA: ENSMUST00000028752.7

Vps39-201, Transcript of Vam6/Vps39-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps39, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39-201ENSMUST00000028752 Exosc9Q9JHI7 438 aaKnown RBP11.72□□□□□ -0.53
Vps39-201ENSMUST00000028752 HnrnpuQ8VEK3 800 aaKnown RBP11.72□□□□□ -0.53
Vps39-201ENSMUST00000028752 MccE9PWI3 1003 aa11.72□□□□□ -0.53
Vps39-201ENSMUST00000028752 ScribQ80U72 1612 aa11.72□□□□□ -0.53
Vps39-201ENSMUST00000028752 Pank1Q8K4K6 548 aa11.72□□□□□ -0.53
Vps39-201ENSMUST00000028752 Trim58Q5NCC9 485 aa11.71□□□□□ -0.53
Vps39-201ENSMUST00000028752 Ccdc30Q8BVF4 654 aa11.71□□□□□ -0.53
Vps39-201ENSMUST00000028752 AampJ3QN89 436 aa11.71□□□□□ -0.54
Vps39-201ENSMUST00000028752 RdxP26043 583 aaKnown RBP11.71□□□□□ -0.54
Vps39-201ENSMUST00000028752 Srcin1Q9QWI6 1250 aa11.71□□□□□ -0.54
Vps39-201ENSMUST00000028752 Casq1O09165 405 aa11.7□□□□□ -0.54
Vps39-201ENSMUST00000028752 Ccar1Q8CH18 1146 aaKnown RBP11.7□□□□□ -0.54
Vps39-201ENSMUST00000028752 Top2aQ01320 1528 aaKnown RBP11.7□□□□□ -0.54
Vps39-201ENSMUST00000028752 1700019A02RikA0A087WPV9 146 aa11.7□□□□□ -0.54
Vps39-201ENSMUST00000028752 IqubQ8CDK3 788 aa11.7□□□□□ -0.54
Vps39-201ENSMUST00000028752 Carmil1Q6EDY6 1374 aa11.7□□□□□ -0.54
Vps39-201ENSMUST00000028752 Ssh1Q76I79 1042 aa11.7□□□□□ -0.54
Vps39-201ENSMUST00000028752 Dhx29Q6PGC1 1365 aaKnown RBP11.69□□□□□ -0.54
Vps39-201ENSMUST00000028752 Plekhh1Q80TI1 1356 aa11.69□□□□□ -0.54
Vps39-201ENSMUST00000028752 Plekhh2Q8C115 1491 aa11.69□□□□□ -0.54
Vps39-201ENSMUST00000028752 Zscan10Q3URR7 782 aa11.69□□□□□ -0.54
Vps39-201ENSMUST00000028752 Map7d2A2AG50 781 aa11.68□□□□□ -0.54
Vps39-201ENSMUST00000028752 Pdia4P08003 638 aaKnown RBP11.68□□□□□ -0.54
Vps39-201ENSMUST00000028752 Ecm2Q5FW85 670 aa11.68□□□□□ -0.54
Vps39-201ENSMUST00000028752 Ralbp1Q62172 648 aa11.68□□□□□ -0.54
Vps39-201ENSMUST00000028752 Stard8Q8K031 1019 aa11.68□□□□□ -0.54
Vps39-201ENSMUST00000028752 Stk24Q99KH8 431 aa11.68□□□□□ -0.54
Vps39-201ENSMUST00000028752 Gtf2e1Q9D0D5 440 aa11.68□□□□□ -0.54
Vps39-201ENSMUST00000028752 Nup155Q99P88 1391 aaKnown RBP11.68□□□□□ -0.54
Vps39-201ENSMUST00000028752 Sptbn5F6UCX4 1208 aa11.67□□□□□ -0.54
Vps39-201ENSMUST00000028752 Isy1Q69ZQ2 285 aaKnown RBP11.67□□□□□ -0.54
Vps39-201ENSMUST00000028752 Cc2d2aQ8CFW7 1633 aa11.67□□□□□ -0.54
Vps39-201ENSMUST00000028752 Stag3O70576 1240 aa11.67□□□□□ -0.54
Vps39-201ENSMUST00000028752 Fam13bQ8K2H3 851 aa11.67□□□□□ -0.54
Vps39-201ENSMUST00000028752 Ppp2r3aB2RXC8 1150 aa11.67□□□□□ -0.54
Vps39-201ENSMUST00000028752 Atl3Q91YH5 541 aa11.67□□□□□ -0.54
Vps39-201ENSMUST00000028752 Arhgef5E9Q7D5 1581 aa11.67□□□□□ -0.54
Vps39-201ENSMUST00000028752 Plekhg5Q66T02 1073 aa11.66□□□□□ -0.54
Vps39-201ENSMUST00000028752 Ccdc146E9Q9F7 977 aa11.65□□□□□ -0.54
Vps39-201ENSMUST00000028752 Fam43aQ8BUP8 424 aa11.65□□□□□ -0.54
Vps39-201ENSMUST00000028752 Zfp644E9QA22 1323 aa11.65□□□□□ -0.54
Vps39-201ENSMUST00000028752 BccipQ9CWI3 316 aa11.65□□□□□ -0.54
Vps39-201ENSMUST00000028752 Cttnbp2B9EJA2 1648 aa11.65□□□□□ -0.55
Vps39-201ENSMUST00000028752 Calcoco2A2A6M5 331 aa11.64□□□□□ -0.55
Vps39-201ENSMUST00000028752 Mcm4P49717 862 aa11.64□□□□□ -0.55
Vps39-201ENSMUST00000028752 CgnP59242 1191 aa11.64□□□□□ -0.55
Vps39-201ENSMUST00000028752 Rnf214Q8BFU3 668 aaKnown RBP11.64□□□□□ -0.55
Vps39-201ENSMUST00000028752 Irx6Q9ER75 438 aa11.64□□□□□ -0.55
Vps39-201ENSMUST00000028752 Dusp27Q148W8 1138 aa11.64□□□□□ -0.55
Vps39-201ENSMUST00000028752 Gripap1Q8VD04 806 aa11.64□□□□□ -0.55
Vps39-201ENSMUST00000028752 Glipr1l2Q9CQ35 332 aa11.63□□□□□ -0.55
Vps39-201ENSMUST00000028752 Cspp1B2RX88 1205 aa11.63□□□□□ -0.55
Vps39-201ENSMUST00000028752 Fam184bQ0KK56 942 aa11.63□□□□□ -0.55
Vps39-201ENSMUST00000028752 TimelessQ9R1X4 1197 aa11.63□□□□□ -0.55
Vps39-201ENSMUST00000028752 U2surpQ6NV83 1029 aaKnown RBP11.63□□□□□ -0.55
Vps39-201ENSMUST00000028752 Ppp1r9bQ6R891 817 aaKnown RBP11.62□□□□□ -0.55
Vps39-201ENSMUST00000028752 Fez1Q8K0X8 392 aa11.62□□□□□ -0.55
Vps39-201ENSMUST00000028752 Kif7B7ZNG0 1348 aa11.62□□□□□ -0.55
Vps39-201ENSMUST00000028752 Senp3Q9EP97 568 aaKnown RBP11.62□□□□□ -0.55
Vps39-201ENSMUST00000028752 Kif4P33174 1231 aa11.61□□□□□ -0.55
Vps39-201ENSMUST00000028752 Kif3aP28741 701 aa11.61□□□□□ -0.55
Vps39-201ENSMUST00000028752 Atp6v1dP57746 247 aa11.61□□□□□ -0.55
Vps39-201ENSMUST00000028752 Ccdc60Q8C4J0 545 aa11.61□□□□□ -0.55
Vps39-201ENSMUST00000028752 Cald1E9QA15 768 aaKnown RBP11.6□□□□□ -0.55
Vps39-201ENSMUST00000028752 Samd1D3YXK1 519 aa11.6□□□□□ -0.55
Vps39-201ENSMUST00000028752 Smc5Q8CG46 1101 aaKnown RBP11.6□□□□□ -0.55
Vps39-201ENSMUST00000028752 Sf3a1Q8K4Z5 791 aaKnown RBP11.59□□□□□ -0.55
Vps39-201ENSMUST00000028752 Utp3Q9JI13 469 aaKnown RBP11.59□□□□□ -0.55
Vps39-201ENSMUST00000028752 Tiam1Q60610 1591 aa11.59□□□□□ -0.55
Vps39-201ENSMUST00000028752 Znf326O88291 580 aa11.59□□□□□ -0.55
Vps39-201ENSMUST00000028752 Efcab5A0JP43 1406 aa11.59□□□□□ -0.55
Vps39-201ENSMUST00000028752 St18Q80TY4 1045 aa11.59□□□□□ -0.55
Vps39-201ENSMUST00000028752 Kank1E9Q238 1360 aa11.58□□□□□ -0.55
Vps39-201ENSMUST00000028752 TchhA0A0B4J1F9 1599 aa11.58□□□□□ -0.56
Vps39-201ENSMUST00000028752 Cgnl1Q6AW69 1298 aa11.58□□□□□ -0.56
Vps39-201ENSMUST00000028752 Ncoa1P70365 1447 aa11.58□□□□□ -0.56
Vps39-201ENSMUST00000028752 Taf3Q5HZG4 932 aa11.58□□□□□ -0.56
Vps39-201ENSMUST00000028752 Eif4g2Q62448 906 aaKnown RBP11.57□□□□□ -0.56
Vps39-201ENSMUST00000028752 Filip1lQ6P6L0 1131 aa11.57□□□□□ -0.56
Vps39-201ENSMUST00000028752 Tsen2Q6P7W5 460 aa11.57□□□□□ -0.56
Vps39-201ENSMUST00000028752 Smarce1O54941 411 aaKnown RBP11.57□□□□□ -0.56
Vps39-201ENSMUST00000028752 Nkx1-2P42580 305 aa11.57□□□□□ -0.56
Vps39-201ENSMUST00000028752 Tomm22Q9CPQ3 142 aa11.57□□□□□ -0.56
Vps39-201ENSMUST00000028752 GsdmaQ9EST1 446 aa11.56□□□□□ -0.56
Vps39-201ENSMUST00000028752 Ccdc173A0JLY1 547 aa11.56□□□□□ -0.56
Vps39-201ENSMUST00000028752 Zfp777B9EKF4 885 aa11.56□□□□□ -0.56
Vps39-201ENSMUST00000028752 Tpd52l1O54818 204 aa11.56□□□□□ -0.56
Vps39-201ENSMUST00000028752 PogkQ80TC5 607 aa11.56□□□□□ -0.56
Vps39-201ENSMUST00000028752 Naip5Q9R016 1403 aa11.56□□□□□ -0.56
Vps39-201ENSMUST00000028752 G3bp1P97855 465 aaKnown RBP11.56□□□□□ -0.56
Vps39-201ENSMUST00000028752 Tspyl2Q7TQI8 677 aa11.56□□□□□ -0.56
Vps39-201ENSMUST00000028752 Ppp2r1aQ76MZ3 589 aa11.55□□□□□ -0.56
Vps39-201ENSMUST00000028752 Stk11ipQ3TAA7 1072 aa11.55□□□□□ -0.56
Vps39-201ENSMUST00000028752 Plin1Q8CGN5 517 aa11.55□□□□□ -0.56
Vps39-201ENSMUST00000028752 Nek4Q9Z1J2 792 aa11.55□□□□□ -0.56
Vps39-201ENSMUST00000028752 Pes1Q9EQ61 584 aaKnown RBP11.54□□□□□ -0.56
Vps39-201ENSMUST00000028752 Cux1P53564 1515 aa11.54□□□□□ -0.56
Vps39-201ENSMUST00000028752 Ercc6F8VPZ5 1481 aa11.54□□□□□ -0.56
Vps39-201ENSMUST00000028752 Ift140E9PY46 1464 aa11.53□□□□□ -0.56
Vps39-201ENSMUST00000028752 CrebrfQ8CDG5 640 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 47.2 ms