RNA–Protein interactions for RNA: ENSMUST00000028752.7

Vps39-201, Transcript of Vam6/Vps39-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps39, Length 4,339 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39-201ENSMUST00000028752 Rhox8Q6VSS7 320 aa16.18■□□□□ 0.18
Vps39-201ENSMUST00000028752 Rpgrip1Q9EPQ2 1331 aa15.94■□□□□ 0.14
Vps39-201ENSMUST00000028752 Ehmt2Q9Z148 1263 aaKnown RBP15.37■□□□□ 0.05
Vps39-201ENSMUST00000028752 Las1lA2BE28 776 aaKnown RBP15.13■□□□□ 0.01
Vps39-201ENSMUST00000028752 Acin1Q9JIX8 1338 aaKnown RBP14.98□□□□□ -0.01
Vps39-201ENSMUST00000028752 Pcgf6Q99NA9 353 aa14.75□□□□□ -0.05
Vps39-201ENSMUST00000028752 Cngb1E1AZ71 1325 aa14.74□□□□□ -0.05
Vps39-201ENSMUST00000028752 Zeb1Q64318 1117 aa14.74□□□□□ -0.05
Vps39-201ENSMUST00000028752 Wdr66E9Q743 1299 aa14.6□□□□□ -0.07
Vps39-201ENSMUST00000028752 NischQ80TM9 1593 aa14.56□□□□□ -0.08
Vps39-201ENSMUST00000028752 Ccdc136Q3TVA9 1136 aa14.55□□□□□ -0.08
Vps39-201ENSMUST00000028752 CenpbP27790 599 aa14.47□□□□□ -0.09
Vps39-201ENSMUST00000028752 Ccdc180J3QNE4 1664 aa14.44□□□□□ -0.1
Vps39-201ENSMUST00000028752 Trim41Q5NCC3 630 aa14.38□□□□□ -0.11
Vps39-201ENSMUST00000028752 Supt5hO55201 1082 aaKnown RBP14.37□□□□□ -0.11
Vps39-201ENSMUST00000028752 Myt1Q8CFC2 1127 aa14.3□□□□□ -0.12
Vps39-201ENSMUST00000028752 NefmP08553 848 aa14.29□□□□□ -0.12
Vps39-201ENSMUST00000028752 Gab3Q8BSM5 595 aa14.28□□□□□ -0.12
Vps39-201ENSMUST00000028752 Rtl1Q7M732 1744 aa14.24□□□□□ -0.13
Vps39-201ENSMUST00000028752 Pelp1Q9DBD5 1123 aaKnown RBP14.24□□□□□ -0.13
Vps39-201ENSMUST00000028752 HrcG5E8J6 738 aa14.23□□□□□ -0.13
Vps39-201ENSMUST00000028752 Cdk11bP24788 784 aaKnown RBP14.13□□□□□ -0.15
Vps39-201ENSMUST00000028752 Neurod1Q60867 357 aa14.12□□□□□ -0.15
Vps39-201ENSMUST00000028752 Nop58Q6DFW4 536 aaKnown RBP14□□□□□ -0.17
Vps39-201ENSMUST00000028752 DiexfQ8BTT6 772 aaKnown RBP13.96□□□□□ -0.17
Vps39-201ENSMUST00000028752 UbtfP25976 765 aaKnown RBP13.95□□□□□ -0.18
Vps39-201ENSMUST00000028752 Ppargc1bQ8VHJ7 1014 aa13.88□□□□□ -0.19
Vps39-201ENSMUST00000028752 Esf1Q3V1V3 845 aaKnown RBP13.87□□□□□ -0.19
Vps39-201ENSMUST00000028752 Amer1Q7TS75 1132 aa13.85□□□□□ -0.19
Vps39-201ENSMUST00000028752 Csrnp3P59055 597 aa13.85□□□□□ -0.19
Vps39-201ENSMUST00000028752 Myt1lP97500 1187 aa13.81□□□□□ -0.2
Vps39-201ENSMUST00000028752 Anks4bQ8K3X6 423 aa13.81□□□□□ -0.2
Vps39-201ENSMUST00000028752 Stra8P70278 393 aa13.78□□□□□ -0.2
Vps39-201ENSMUST00000028752 Dcaf1Q80TR8 1506 aa13.77□□□□□ -0.21
Vps39-201ENSMUST00000028752 Mier1Q5UAK0 511 aa13.77□□□□□ -0.21
Vps39-201ENSMUST00000028752 Tnnt3Q9QZ47 272 aa13.77□□□□□ -0.21
Vps39-201ENSMUST00000028752 Sall2Q9QX96 1004 aa13.76□□□□□ -0.21
Vps39-201ENSMUST00000028752 Ttbk1Q6PCN3 1308 aa13.74□□□□□ -0.21
Vps39-201ENSMUST00000028752 Abcc9P70170 1546 aa13.73□□□□□ -0.21
Vps39-201ENSMUST00000028752 Gm38655A0A286YDK6 273 aa13.72□□□□□ -0.21
Vps39-201ENSMUST00000028752 1700123L14RikQ3V2K7 440 aa13.71□□□□□ -0.21
Vps39-201ENSMUST00000028752 Npm2Q80W85 207 aa13.71□□□□□ -0.22
Vps39-201ENSMUST00000028752 Aplp2Q06335 707 aa13.7□□□□□ -0.22
Vps39-201ENSMUST00000028752 Slc24a1Q91WD8 1130 aa13.68□□□□□ -0.22
Vps39-201ENSMUST00000028752 Ube2uB1AUC4 352 aa13.67□□□□□ -0.22
Vps39-201ENSMUST00000028752 ClspnQ80YR7 1315 aa13.62□□□□□ -0.23
Vps39-201ENSMUST00000028752 TonslQ6NZL6 1363 aa13.58□□□□□ -0.24
Vps39-201ENSMUST00000028752 Rtl5Q5DTT4 599 aa13.55□□□□□ -0.24
Vps39-201ENSMUST00000028752 Anp32aO35381 247 aa13.48□□□□□ -0.25
Vps39-201ENSMUST00000028752 4933416C03RikQ3V063 378 aa13.45□□□□□ -0.26
Vps39-201ENSMUST00000028752 Eif5bQ05D44 1216 aaKnown RBP13.4□□□□□ -0.26
Vps39-201ENSMUST00000028752 NclP09405 707 aaKnown RBP13.4□□□□□ -0.26
Vps39-201ENSMUST00000028752 Mapk8ip2Q9ERE9 830 aa13.33□□□□□ -0.28
Vps39-201ENSMUST00000028752 Bcl11aQ9QYE3 773 aa13.33□□□□□ -0.28
Vps39-201ENSMUST00000028752 Fam71e1A1L3C1 212 aa13.31□□□□□ -0.28
Vps39-201ENSMUST00000028752 Cep164Q5DU05 1446 aa13.31□□□□□ -0.28
Vps39-201ENSMUST00000028752 Abcc8B2RUS7 1588 aa13.3□□□□□ -0.28
Vps39-201ENSMUST00000028752 Zcchc6Q5BLK4 1491 aaKnown RBP13.3□□□□□ -0.28
Vps39-201ENSMUST00000028752 NrdcQ8BHG1 1161 aa13.29□□□□□ -0.28
Vps39-201ENSMUST00000028752 Aebp2Q9Z248 504 aaKnown RBP13.27□□□□□ -0.28
Vps39-201ENSMUST00000028752 Fam50aQ9WV03 339 aaKnown RBP13.24□□□□□ -0.29
Vps39-201ENSMUST00000028752 Ap3b1Q9Z1T1 1105 aa13.24□□□□□ -0.29
Vps39-201ENSMUST00000028752 Chic1Q8CBW7 227 aa13.17□□□□□ -0.3
Vps39-201ENSMUST00000028752 Eid3Q3V124 375 aa13.16□□□□□ -0.3
Vps39-201ENSMUST00000028752 Plekhg3Q4VAC9 1341 aa13.16□□□□□ -0.3
Vps39-201ENSMUST00000028752 Calr4Q3TQS0 420 aa13.15□□□□□ -0.3
Vps39-201ENSMUST00000028752 DaxxO35613 739 aa13.14□□□□□ -0.31
Vps39-201ENSMUST00000028752 NeflP08551 543 aa13.14□□□□□ -0.31
Vps39-201ENSMUST00000028752 Ppp4r2Q0VGB7 417 aa13.09□□□□□ -0.31
Vps39-201ENSMUST00000028752 SafbD3YXK2 937 aaKnown RBP13.08□□□□□ -0.32
Vps39-201ENSMUST00000028752 Hnrnpul2Q00PI9 745 aaKnown RBP13.05□□□□□ -0.32
Vps39-201ENSMUST00000028752 Wdr43Q6ZQL4 677 aaKnown RBP13.02□□□□□ -0.33
Vps39-201ENSMUST00000028752 Il27Q8K3I6 234 aa13.02□□□□□ -0.33
Vps39-201ENSMUST00000028752 Anp32bQ9EST5 272 aaKnown RBP12.98□□□□□ -0.33
Vps39-201ENSMUST00000028752 4930567H17RikQ3V0K5 233 aa12.97□□□□□ -0.33
Vps39-201ENSMUST00000028752 Ccdc9Q8VC31 543 aaKnown RBP12.93□□□□□ -0.34
Vps39-201ENSMUST00000028752 Clip1Q922J3 1391 aa12.91□□□□□ -0.34
Vps39-201ENSMUST00000028752 Hsp90aa1P07901 733 aaKnown RBP12.9□□□□□ -0.34
Vps39-201ENSMUST00000028752 Lmod2Q3UHZ5 550 aa12.85□□□□□ -0.35
Vps39-201ENSMUST00000028752 Ccdc27Q3V036 639 aa12.85□□□□□ -0.35
Vps39-201ENSMUST00000028752 Rb1cc1Q9ESK9 1588 aa12.82□□□□□ -0.36
Vps39-201ENSMUST00000028752 Gm35339A0A140LHH9 1649 aa12.81□□□□□ -0.36
Vps39-201ENSMUST00000028752 PrkcshO08795 521 aa12.81□□□□□ -0.36
Vps39-201ENSMUST00000028752 Mrs2Q5NCE8 434 aa12.81□□□□□ -0.36
Vps39-201ENSMUST00000028752 Brd4Q9ESU6 1400 aaKnown RBP12.79□□□□□ -0.36
Vps39-201ENSMUST00000028752 Irx3P81067 507 aa12.75□□□□□ -0.37
Vps39-201ENSMUST00000028752 Rsf1E9PWW9 1441 aaKnown RBP12.75□□□□□ -0.37
Vps39-201ENSMUST00000028752 P3h3Q8CG70 732 aa12.74□□□□□ -0.37
Vps39-201ENSMUST00000028752 Supt16hQ920B9 1047 aa12.74□□□□□ -0.37
Vps39-201ENSMUST00000028752 ArxO35085 564 aa12.71□□□□□ -0.37
Vps39-201ENSMUST00000028752 Ccer2J3QPU5 274 aa12.69□□□□□ -0.38
Vps39-201ENSMUST00000028752 Upf2A2AT37 1269 aaKnown RBP12.66□□□□□ -0.38
Vps39-201ENSMUST00000028752 Nolc1E9Q5C9 702 aaKnown RBP12.66□□□□□ -0.38
Vps39-201ENSMUST00000028752 CanxP35564 591 aaKnown RBP12.65□□□□□ -0.38
Vps39-201ENSMUST00000028752 Ifnlr1Q8CGK5 535 aa12.65□□□□□ -0.38
Vps39-201ENSMUST00000028752 Slc4a3P16283 1227 aa12.6□□□□□ -0.39
Vps39-201ENSMUST00000028752 Zbtb4Q5F293 982 aa12.6□□□□□ -0.39
Vps39-201ENSMUST00000028752 Golga3P55937 1487 aa12.59□□□□□ -0.39
Vps39-201ENSMUST00000028752 Hdac5Q9Z2V6 1113 aa12.58□□□□□ -0.4
Vps39-201ENSMUST00000028752 Ofd1Q80Z25 1017 aa12.58□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 82.3 ms