RNA–Protein interactions for RNA: ENSMUST00000026008.7

Trim8-201, Transcript of Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim8, Length 3,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8-201ENSMUST00000026008 Pbrm1Q8BSQ9 1634 aaKnown RBP21.88■■□□□ 1.09
Trim8-201ENSMUST00000026008 Mapkbp1Q6NS57 1503 aa21.88■■□□□ 1.09
Trim8-201ENSMUST00000026008 RalgapbQ8BQZ4 1484 aa21.87■■□□□ 1.09
Trim8-201ENSMUST00000026008 Ttbk1Q6PCN3 1308 aa21.87■■□□□ 1.09
Trim8-201ENSMUST00000026008 Mlh3A0A1Y7VMP7 1443 aa21.86■■□□□ 1.09
Trim8-201ENSMUST00000026008 Zscan21Q07231 555 aa21.85■■□□□ 1.09
Trim8-201ENSMUST00000026008 Tcerg1Q8CGF7 1100 aaKnown RBP21.85■■□□□ 1.09
Trim8-201ENSMUST00000026008 Ifit1bl1D3Z6F0 470 aa21.84■■□□□ 1.09
Trim8-201ENSMUST00000026008 Erbb3Q61526 1339 aa21.84■■□□□ 1.09
Trim8-201ENSMUST00000026008 Rock2P70336 1388 aa21.84■■□□□ 1.09
Trim8-201ENSMUST00000026008 Zfp444Q3TDV8 331 aaKnown RBP21.84■■□□□ 1.09
Trim8-201ENSMUST00000026008 Trpm2Q91YD4 1506 aa21.82■■□□□ 1.08
Trim8-201ENSMUST00000026008 Clstn2Q9ER65 966 aa21.81■■□□□ 1.08
Trim8-201ENSMUST00000026008 Polr3aB2RXC6 1390 aa21.81■■□□□ 1.08
Trim8-201ENSMUST00000026008 NeflP08551 543 aa21.81■■□□□ 1.08
Trim8-201ENSMUST00000026008 Sart1Q9Z315 806 aaKnown RBP21.8■■□□□ 1.08
Trim8-201ENSMUST00000026008 Rusc2Q80U22 1514 aa21.8■■□□□ 1.08
Trim8-201ENSMUST00000026008 Pank3Q8R2W9 370 aa21.8■■□□□ 1.08
Trim8-201ENSMUST00000026008 Mak16Q8BGS0 296 aaKnown RBP21.8■■□□□ 1.08
Trim8-201ENSMUST00000026008 Inpp5dQ9ES52 1191 aa21.79■■□□□ 1.08
Trim8-201ENSMUST00000026008 Caskin1Q6P9K8 1431 aa21.78■■□□□ 1.08
Trim8-201ENSMUST00000026008 Cpsf1Q9EPU4 1441 aaKnown RBP21.78■■□□□ 1.08
Trim8-201ENSMUST00000026008 Ssh2Q5SW75 1423 aa21.77■■□□□ 1.08
Trim8-201ENSMUST00000026008 DroshaQ5HZJ0 1373 aaKnown RBP21.77■■□□□ 1.08
Trim8-201ENSMUST00000026008 Erich6D3Z6S9 713 aa21.77■■□□□ 1.08
Trim8-201ENSMUST00000026008 Asxl1P59598 1514 aa21.76■■□□□ 1.07
Trim8-201ENSMUST00000026008 Cd109Q8R422 1442 aa21.75■■□□□ 1.07
Trim8-201ENSMUST00000026008 Dot1lQ6XZL8 1540 aa21.75■■□□□ 1.07
Trim8-201ENSMUST00000026008 Fgd6Q69ZL1 1399 aa21.74■■□□□ 1.07
Trim8-201ENSMUST00000026008 Trappc8E9PWG2 1437 aa21.73■■□□□ 1.07
Trim8-201ENSMUST00000026008 Kank1E9Q238 1360 aa21.72■■□□□ 1.07
Trim8-201ENSMUST00000026008 Mroh3A0A1D5RM54 893 aa21.72■■□□□ 1.07
Trim8-201ENSMUST00000026008 Zcchc11B2RX14 1644 aaKnown RBP21.72■■□□□ 1.07
Trim8-201ENSMUST00000026008 Ipo9Q91YE6 1041 aa21.71■■□□□ 1.07
Trim8-201ENSMUST00000026008 PtprgQ05909 1442 aa21.71■■□□□ 1.07
Trim8-201ENSMUST00000026008 Atp7aQ64430 1491 aa21.71■■□□□ 1.07
Trim8-201ENSMUST00000026008 Kdm2aP59997 1161 aa21.7■■□□□ 1.07
Trim8-201ENSMUST00000026008 Dnmt1P13864 1620 aaKnown RBP21.7■■□□□ 1.06
Trim8-201ENSMUST00000026008 Esx1O88933 382 aa21.7■■□□□ 1.06
Trim8-201ENSMUST00000026008 Arhgap5P97393 1501 aa21.69■■□□□ 1.06
Trim8-201ENSMUST00000026008 PrxO55103 1391 aa21.69■■□□□ 1.06
Trim8-201ENSMUST00000026008 Upf2A2AT37 1269 aaKnown RBP21.68■■□□□ 1.06
Trim8-201ENSMUST00000026008 Rock1P70335 1354 aa21.68■■□□□ 1.06
Trim8-201ENSMUST00000026008 Lrrc9Q8CDN9 1456 aa21.68■■□□□ 1.06
Trim8-201ENSMUST00000026008 Fmn2Q9JL04 1578 aa21.68■■□□□ 1.06
Trim8-201ENSMUST00000026008 CrbnQ8C7D2 445 aa21.67■■□□□ 1.06
Trim8-201ENSMUST00000026008 Fancd2Q80V62 1450 aa21.66■■□□□ 1.06
Trim8-201ENSMUST00000026008 Zscan10Q3URR7 782 aa21.65■■□□□ 1.06
Trim8-201ENSMUST00000026008 Ccdc27Q3V036 639 aa21.64■■□□□ 1.05
Trim8-201ENSMUST00000026008 Os9Q8K2C7 672 aa21.64■■□□□ 1.05
Trim8-201ENSMUST00000026008 Slc4a1apE9PX68 744 aa21.64■■□□□ 1.05
Trim8-201ENSMUST00000026008 Gm14025A2AP89 1413 aa21.63■■□□□ 1.05
Trim8-201ENSMUST00000026008 Iqgap1Q9JKF1 1657 aaKnown RBP21.63■■□□□ 1.05
Trim8-201ENSMUST00000026008 ChgaP26339 463 aaKnown RBP21.63■■□□□ 1.05
Trim8-201ENSMUST00000026008 Spag9Q58A65 1321 aaKnown RBP21.62■■□□□ 1.05
Trim8-201ENSMUST00000026008 Adgrl2Q8JZZ7 1487 aa21.62■■□□□ 1.05
Trim8-201ENSMUST00000026008 B4galnt3Q6L8S8 986 aa21.62■■□□□ 1.05
Trim8-201ENSMUST00000026008 Prdm10Q3UTQ7 1184 aa21.61■■□□□ 1.05
Trim8-201ENSMUST00000026008 PrkcshO08795 521 aa21.61■■□□□ 1.05
Trim8-201ENSMUST00000026008 Tarbp1E9Q368 1579 aa21.61■■□□□ 1.05
Trim8-201ENSMUST00000026008 Tmf1B9EKI3 1091 aa21.61■■□□□ 1.05
Trim8-201ENSMUST00000026008 Apbb1Q9QXJ1 710 aa21.61■■□□□ 1.05
Trim8-201ENSMUST00000026008 Pde4cQ3UEI1 686 aa21.6■■□□□ 1.05
Trim8-201ENSMUST00000026008 Map3k5O35099 1380 aa21.6■■□□□ 1.05
Trim8-201ENSMUST00000026008 Kdm5cP41230 1554 aa21.6■■□□□ 1.05
Trim8-201ENSMUST00000026008 Arid3cA6PWV5 409 aa21.59■■□□□ 1.05
Trim8-201ENSMUST00000026008 Prkrip1Q9CWV6 186 aaKnown RBP21.59■■□□□ 1.05
Trim8-201ENSMUST00000026008 Eif4g3Q80XI3 1579 aaKnown RBP21.58■■□□□ 1.05
Trim8-201ENSMUST00000026008 Fam208aQ69ZR9 1610 aaKnown RBP21.57■■□□□ 1.04
Trim8-201ENSMUST00000026008 Dbr1Q923B1 550 aa21.57■■□□□ 1.04
Trim8-201ENSMUST00000026008 Srcin1Q9QWI6 1250 aa21.57■■□□□ 1.04
Trim8-201ENSMUST00000026008 Zmym4A2A791 1549 aaKnown RBP21.54■■□□□ 1.04
Trim8-201ENSMUST00000026008 Sall3Q62255 1320 aa21.54■■□□□ 1.04
Trim8-201ENSMUST00000026008 Ttll13A4Q9F6 804 aa21.53■■□□□ 1.04
Trim8-201ENSMUST00000026008 Ppp2r1aQ76MZ3 589 aa21.53■■□□□ 1.04
Trim8-201ENSMUST00000026008 Kif16bB1AVY7 1312 aa21.52■■□□□ 1.04
Trim8-201ENSMUST00000026008 Neurod2Q62414 383 aa21.52■■□□□ 1.04
Trim8-201ENSMUST00000026008 Gapvd1Q6PAR5 1458 aa21.52■■□□□ 1.03
Trim8-201ENSMUST00000026008 Fam184bQ0KK56 942 aa21.48■■□□□ 1.03
Trim8-201ENSMUST00000026008 Nlrp6Q91WS2 869 aa21.48■■□□□ 1.03
Trim8-201ENSMUST00000026008 Ak9G3UYQ4 1894 aa21.47■■□□□ 1.03
Trim8-201ENSMUST00000026008 Rrbp1Q99PL5 1605 aaKnown RBP21.47■■□□□ 1.03
Trim8-201ENSMUST00000026008 Abcc1O35379 1528 aa21.47■■□□□ 1.03
Trim8-201ENSMUST00000026008 Gm20521D3Z5F7 333 aa21.47■■□□□ 1.03
Trim8-201ENSMUST00000026008 Gm32742A0A1B0GT42 1604 aa21.47■■□□□ 1.03
Trim8-201ENSMUST00000026008 Adamts13Q769J6 1426 aa21.46■■□□□ 1.03
Trim8-201ENSMUST00000026008 Znf608Q56A10 1511 aa21.46■■□□□ 1.03
Trim8-201ENSMUST00000026008 Speer4f1Q9D5Q6 258 aa21.46■■□□□ 1.03
Trim8-201ENSMUST00000026008 Stk24Q99KH8 431 aa21.45■■□□□ 1.02
Trim8-201ENSMUST00000026008 Rwdd1Q9CQK7 243 aa21.45■■□□□ 1.02
Trim8-201ENSMUST00000026008 Edc4Q3UJB9 1406 aaKnown RBP21.45■■□□□ 1.02
Trim8-201ENSMUST00000026008 Tubgcp6G5E8P0 1769 aa21.45■■□□□ 1.02
Trim8-201ENSMUST00000026008 Mink1Q9JM52 1308 aa21.45■■□□□ 1.02
Trim8-201ENSMUST00000026008 Setd1aE9PYH6 1716 aa21.45■■□□□ 1.02
Trim8-201ENSMUST00000026008 Amer1Q7TS75 1132 aa21.44■■□□□ 1.02
Trim8-201ENSMUST00000026008 AI481877A2ALV5 1481 aa21.43■■□□□ 1.02
Trim8-201ENSMUST00000026008 Prdm16A2A935 1275 aa21.43■■□□□ 1.02
Trim8-201ENSMUST00000026008 Plch2A2AP18 1501 aa21.43■■□□□ 1.02
Trim8-201ENSMUST00000026008 Atp10dQ8K2X1 1416 aa21.42■■□□□ 1.02
Trim8-201ENSMUST00000026008 Tex14Q7M6U3 1450 aa21.42■■□□□ 1.02
Retrieved 100 of 22,080 RNA–protein pairs in 56.4 ms