RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A BLM10P43583 2143 aa7.28□□□□□ -1.24
TGA1tA(UGC)A TIM9O74700 87 aa7.27□□□□□ -1.25
TGA1tA(UGC)A UTR1P21373 530 aa7.27□□□□□ -1.25
TGA1tA(UGC)A YCR100CP25606 316 aa7.27□□□□□ -1.25
TGA1tA(UGC)A NTG1P31378 399 aa7.27□□□□□ -1.25
TGA1tA(UGC)A TIM12P32830 109 aa7.27□□□□□ -1.25
TGA1tA(UGC)A SRO77P38163 1010 aa7.27□□□□□ -1.25
TGA1tA(UGC)A RPP1P38786 293 aa7.27□□□□□ -1.25
TGA1tA(UGC)A SWD1P39706 426 aa7.27□□□□□ -1.25
TGA1tA(UGC)A RBG2P53295 368 aaKnown RBP7.27□□□□□ -1.25
TGA1tA(UGC)A RCN2Q12044 265 aa7.27□□□□□ -1.25
TGA1tA(UGC)A YDL109CQ12103 647 aa7.27□□□□□ -1.25
TGA1tA(UGC)A HER1Q12276 1246 aa7.27□□□□□ -1.25
TGA1tA(UGC)A PDX1P16451 410 aa7.26□□□□□ -1.25
TGA1tA(UGC)A PET9P18239 318 aaKnown RBP7.26□□□□□ -1.25
TGA1tA(UGC)A YPK2P18961 677 aa7.26□□□□□ -1.25
TGA1tA(UGC)A RPI1P23250 407 aaKnown RBP7.26□□□□□ -1.25
TGA1tA(UGC)A RER1P25560 188 aa7.26□□□□□ -1.25
TGA1tA(UGC)A GDH2P33327 1092 aaKnown RBP7.26□□□□□ -1.25
TGA1tA(UGC)A APD1P38281 316 aa7.26□□□□□ -1.25
TGA1tA(UGC)A RIX1P38883 763 aaPredicted RBP7.26□□□□□ -1.25
TGA1tA(UGC)A PRE6P40303 254 aaKnown RBP7.26□□□□□ -1.25
TGA1tA(UGC)A TOK1P40310 691 aa7.26□□□□□ -1.25
TGA1tA(UGC)A VHR1P40522 640 aa7.26□□□□□ -1.25
TGA1tA(UGC)A DIM1P41819 318 aaKnown RBP7.26□□□□□ -1.25
TGA1tA(UGC)A CAK1P43568 368 aaPredicted RBP7.26□□□□□ -1.25
TGA1tA(UGC)A RMR1P53060 241 aa7.26□□□□□ -1.25
TGA1tA(UGC)A YPR127WQ06494 345 aa7.26□□□□□ -1.25
TGA1tA(UGC)A SYO1Q07395 620 aa7.26□□□□□ -1.25
TGA1tA(UGC)A SKI7Q08491 747 aaPredicted RBP7.26□□□□□ -1.25
TGA1tA(UGC)A RDL2Q08742 149 aaKnown RBP7.26□□□□□ -1.25
TGA1tA(UGC)A YPL225WQ08971 146 aaKnown RBP7.26□□□□□ -1.25
TGA1tA(UGC)A NFI1Q12216 726 aa7.26□□□□□ -1.25
TGA1tA(UGC)A YPR015CQ12531 247 aa7.26□□□□□ -1.25
TGA1tA(UGC)A YOL159C-AQ3E769 90 aa7.26□□□□□ -1.25
TGA1tA(UGC)A CDC36P06100 191 aaPredicted RBP7.25□□□□□ -1.25
TGA1tA(UGC)A RHB1P25378 209 aa7.25□□□□□ -1.25
TGA1tA(UGC)A HSP30P25619 332 aa7.25□□□□□ -1.25
TGA1tA(UGC)A TRS65P32893 560 aa7.25□□□□□ -1.25
TGA1tA(UGC)A NUF2P33895 451 aa7.25□□□□□ -1.25
TGA1tA(UGC)A SKN7P38889 622 aa7.25□□□□□ -1.25
TGA1tA(UGC)A SHO1P40073 367 aa7.25□□□□□ -1.25
TGA1tA(UGC)A COG3P40094 801 aa7.25□□□□□ -1.25
TGA1tA(UGC)A RFC4P40339 323 aaKnown RBP7.25□□□□□ -1.25
TGA1tA(UGC)A GCN20P43535 752 aaKnown RBP7.25□□□□□ -1.25
TGA1tA(UGC)A MSY1P48527 492 aa7.25□□□□□ -1.25
TGA1tA(UGC)A YGR126WP53274 230 aa7.25□□□□□ -1.25
TGA1tA(UGC)A MRPL1Q04599 285 aa7.25□□□□□ -1.25
TGA1tA(UGC)A VBA4Q04602 768 aaKnown RBP7.25□□□□□ -1.25
TGA1tA(UGC)A SWA2Q06677 668 aa7.25□□□□□ -1.25
TGA1tA(UGC)A YOR343CQ12484 108 aa7.25□□□□□ -1.25
TGA1tA(UGC)A SET6Q12529 373 aa7.25□□□□□ -1.25
TGA1tA(UGC)A HMG1P12683 1054 aa7.24□□□□□ -1.25
TGA1tA(UGC)A HAP4P14064 554 aa7.24□□□□□ -1.25
TGA1tA(UGC)A REC107P21651 314 aa7.24□□□□□ -1.25
TGA1tA(UGC)A CLB4P24871 460 aa7.24□□□□□ -1.25
TGA1tA(UGC)A APE2P32454 952 aaKnown RBP7.24□□□□□ -1.25
TGA1tA(UGC)A MRPL39P36533 70 aa7.24□□□□□ -1.25
TGA1tA(UGC)A MTC6P38849 526 aa7.24□□□□□ -1.25
TGA1tA(UGC)A SEN34P39707 275 aa7.24□□□□□ -1.25
TGA1tA(UGC)A AGP3P43548 558 aa7.24□□□□□ -1.25
TGA1tA(UGC)A BAT2P47176 376 aaKnown RBP7.24□□□□□ -1.25
TGA1tA(UGC)A SHE4P51534 789 aa7.24□□□□□ -1.25
TGA1tA(UGC)A SNF12P53628 566 aa7.24□□□□□ -1.25
TGA1tA(UGC)A YKR011CQ02209 353 aa7.24□□□□□ -1.25
TGA1tA(UGC)A CRR1Q05790 422 aa7.24□□□□□ -1.25
TGA1tA(UGC)A UTP21Q06078 939 aaPredicted RBP7.24□□□□□ -1.25
TGA1tA(UGC)A IRC19Q07843 230 aa7.24□□□□□ -1.25
TGA1tA(UGC)A COQ10Q08058 207 aa7.24□□□□□ -1.25
TGA1tA(UGC)A RSA1Q08932 381 aa7.24□□□□□ -1.25
TGA1tA(UGC)A BTS1Q12051 335 aa7.24□□□□□ -1.25
TGA1tA(UGC)A APC2Q12440 853 aa7.24□□□□□ -1.25
TGA1tA(UGC)A RPL24AP04449 155 aaKnown RBP7.23□□□□□ -1.25
TGA1tA(UGC)A RPC40P07703 335 aaKnown RBP7.23□□□□□ -1.25
TGA1tA(UGC)A CDC4P07834 779 aa7.23□□□□□ -1.25
TGA1tA(UGC)A RPB8P20436 146 aa7.23□□□□□ -1.25
TGA1tA(UGC)A PTP2P29461 750 aa7.23□□□□□ -1.25
TGA1tA(UGC)A HBS1P32769 611 aaKnown RBP7.23□□□□□ -1.25
TGA1tA(UGC)A MDL1P33310 695 aa7.23□□□□□ -1.25
TGA1tA(UGC)A HIS7P33734 552 aaKnown RBP7.23□□□□□ -1.25
TGA1tA(UGC)A MSN4P33749 630 aa7.23□□□□□ -1.25
TGA1tA(UGC)A AIM3P38266 947 aaKnown RBP7.23□□□□□ -1.25
TGA1tA(UGC)A YHL012WP38709 493 aa7.23□□□□□ -1.25
TGA1tA(UGC)A YHL037CP38733 133 aa7.23□□□□□ -1.25
TGA1tA(UGC)A SCS7Q03529 384 aa7.23□□□□□ -1.25
TGA1tA(UGC)A SIA1Q12212 622 aa7.23□□□□□ -1.25
TGA1tA(UGC)A FOL3Q12676 427 aaPredicted RBP7.23□□□□□ -1.25
TGA1tA(UGC)A HEM4P06174 275 aa7.22□□□□□ -1.25
TGA1tA(UGC)A RHO1P06780 209 aaKnown RBP7.22□□□□□ -1.25
TGA1tA(UGC)A YOL162WP0CF19 215 aa7.22□□□□□ -1.25
TGA1tA(UGC)A DPM1P14020 267 aaKnown RBP7.22□□□□□ -1.25
TGA1tA(UGC)A SNC1P31109 117 aa7.22□□□□□ -1.25
TGA1tA(UGC)A JEN1P36035 616 aa7.22□□□□□ -1.25
TGA1tA(UGC)A YGP1P38616 354 aaKnown RBP7.22□□□□□ -1.25
TGA1tA(UGC)A SPO73P40031 143 aa7.22□□□□□ -1.25
TGA1tA(UGC)A MON1P53129 644 aa7.22□□□□□ -1.25
TGA1tA(UGC)A HMO1Q03973 246 aaKnown RBP7.22□□□□□ -1.25
TGA1tA(UGC)A COQ11Q05892 277 aa7.22□□□□□ -1.25
TGA1tA(UGC)A YPR147CQ06522 304 aaKnown RBP7.22□□□□□ -1.25
TGA1tA(UGC)A NTG2Q08214 380 aa7.22□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms