RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 SER3P40054 469 aa0.37□□□□□ -2.35
snR55snR55 INP1Q03694 420 aa0.37□□□□□ -2.35
snR55snR55 YDR341CQ05506 607 aaKnown RBP0.37□□□□□ -2.35
snR55snR55 YRF1-4O13559 1382 aa0.36□□□□□ -2.35
snR55snR55 RNA1P11745 407 aaKnown RBP0.36□□□□□ -2.35
snR55snR55 GFD2P25370 566 aaKnown RBP0.36□□□□□ -2.35
snR55snR55 QDR3P38227 689 aa0.36□□□□□ -2.35
snR55snR55 ZTA1P38230 334 aaKnown RBP0.36□□□□□ -2.35
snR55snR55 SLM4P38247 162 aa0.36□□□□□ -2.35
snR55snR55 EFM1P38732 585 aa0.36□□□□□ -2.35
snR55snR55 ECO1P43605 281 aa0.36□□□□□ -2.35
snR55snR55 DAN1P47178 298 aa0.36□□□□□ -2.35
snR55snR55 SUR7P54003 302 aa0.36□□□□□ -2.35
snR55snR55 NSE1Q07913 336 aa0.36□□□□□ -2.35
snR55snR55 YKR015CP36111 568 aa0.35□□□□□ -2.35
snR55snR55 IST2P38250 946 aa0.35□□□□□ -2.35
snR55snR55 MOB2P43563 287 aa0.35□□□□□ -2.35
snR55snR55 YFR054CP43622 192 aa0.35□□□□□ -2.35
snR55snR55 CAX4P53223 239 aa0.35□□□□□ -2.35
snR55snR55 YLH47Q06493 454 aa0.35□□□□□ -2.35
snR55snR55 NOP6Q07623 225 aaKnown RBP0.35□□□□□ -2.35
snR55snR55 MED1Q12321 566 aa0.35□□□□□ -2.35
snR55snR55 MRX4Q12467 430 aa0.35□□□□□ -2.35
snR55snR55 PHO80P20052 293 aa0.34□□□□□ -2.36
snR55snR55 FAR1P21268 830 aa0.34□□□□□ -2.36
snR55snR55 NRP1P32770 719 aaKnown RBP RIP-Chip data0.34□□□□□ -2.36not detected
snR55snR55 CLB6P32943 380 aa0.34□□□□□ -2.36
snR55snR55 SYF2P53277 215 aaPredicted RBP0.34□□□□□ -2.36
snR55snR55 ERO1Q03103 563 aa0.34□□□□□ -2.36
snR55snR55 YCR051WP25631 222 aa0.33□□□□□ -2.36
snR55snR55 RIM1P32445 135 aaKnown RBP0.33□□□□□ -2.36
snR55snR55 YSC83P32792 385 aa0.33□□□□□ -2.36
snR55snR55 CTM1P38818 585 aa0.33□□□□□ -2.36
snR55snR55 YFR018CP43599 363 aa0.33□□□□□ -2.36
snR55snR55 BNI5P53890 448 aaKnown RBP0.33□□□□□ -2.36
snR55snR55 TRM82Q03774 444 aa0.33□□□□□ -2.36
snR55snR55 VPS68Q12016 184 aa0.33□□□□□ -2.36
snR55snR55 YHR086W-AQ3E746 53 aa0.33□□□□□ -2.36
snR55snR55 AFI1Q99222 893 aa0.33□□□□□ -2.36
snR55snR55 VPS63O13549 108 aa0.32□□□□□ -2.36
snR55snR55 MRP7P12687 371 aa0.32□□□□□ -2.36
snR55snR55 RED1P14291 827 aa0.32□□□□□ -2.36
snR55snR55 FCY21P40039 528 aa0.32□□□□□ -2.36
snR55snR55 MIC19P43594 170 aa0.32□□□□□ -2.36
snR55snR55 MIG2P53035 382 aa0.32□□□□□ -2.36
snR55snR55 MRPL19P53875 158 aa0.32□□□□□ -2.36
snR55snR55 TAF11Q04226 346 aa0.32□□□□□ -2.36
snR55snR55 YLR456WQ06199 204 aa0.32□□□□□ -2.36
snR55snR55 ALE1Q08548 619 aa0.32□□□□□ -2.36
snR55snR55 RRP7P25368 297 aaPredicted RBP0.31□□□□□ -2.36
snR55snR55 URA7P28274 579 aaKnown RBP0.31□□□□□ -2.36
snR55snR55 DCR2Q05924 578 aa0.31□□□□□ -2.36
snR55snR55 IES3Q12345 250 aa0.31□□□□□ -2.36
snR55snR55 CDC42P19073 191 aa0.3□□□□□ -2.36
snR55snR55 REC107P21651 314 aa0.3□□□□□ -2.36
snR55snR55 YIL054WP40524 105 aa0.3□□□□□ -2.36
snR55snR55 PAC11P40960 533 aa0.3□□□□□ -2.36
snR55snR55 GPD2P41911 440 aaKnown RBP0.3□□□□□ -2.36
snR55snR55 SSU72P53538 206 aaPredicted RBP0.3□□□□□ -2.36
snR55snR55 ACT1P60010 375 aaKnown RBP0.3□□□□□ -2.36
snR55snR55 RPN8Q08723 338 aaKnown RBP0.3□□□□□ -2.36
snR55snR55 DET1Q99288 334 aaKnown RBP0.3□□□□□ -2.36
snR55snR55 MRPL20P22354 195 aaPredicted RBP0.29□□□□□ -2.36
snR55snR55 PHO91P27514 894 aa0.29□□□□□ -2.36
snR55snR55 ERV1P27882 189 aa0.29□□□□□ -2.36
snR55snR55 URA10P30402 227 aa0.29□□□□□ -2.36
snR55snR55 FAD1P38913 306 aa0.29□□□□□ -2.36
snR55snR55 DSK2P48510 373 aa0.29□□□□□ -2.36
snR55snR55 FMP48P53233 369 aa0.29□□□□□ -2.36
snR55snR55 RTT102P53330 157 aa0.29□□□□□ -2.36
snR55snR55 UBX2Q04228 584 aa0.29□□□□□ -2.36
snR55snR55 YOR012WQ12351 137 aa0.29□□□□□ -2.36
snR55snR55 ITR2P30606 609 aa0.28□□□□□ -2.36
snR55snR55 RFT1P38206 574 aaPredicted RBP0.28□□□□□ -2.36
snR55snR55 NAB3P38996 802 aaKnown RBP RIP-Chip data0.28□□□□□ -2.36not detected
snR55snR55 YJL027CP47063 138 aaPredicted RBP0.28□□□□□ -2.36
snR55snR55 YGL118CP53132 145 aa0.28□□□□□ -2.36
snR55snR55 YNL040WP53960 456 aaPredicted RBP0.28□□□□□ -2.36
snR55snR55 RDS3Q06835 107 aaPredicted RBP0.28□□□□□ -2.36
snR55snR55 AEP3Q12089 606 aa0.28□□□□□ -2.36
snR55snR55 MRPL8P22353 238 aa0.27□□□□□ -2.37
snR55snR55 PRE7P23724 241 aaKnown RBP0.27□□□□□ -2.37
snR55snR55 YKL071WP36086 256 aa0.27□□□□□ -2.37
snR55snR55 YHR177WP38867 453 aa0.27□□□□□ -2.37
snR55snR55 SLM1P40485 686 aa0.27□□□□□ -2.37
snR55snR55 PIR5P46999 287 aa0.27□□□□□ -2.37
snR55snR55 YJR146WP47174 117 aa0.27□□□□□ -2.37
snR55snR55 YMR166CQ03829 368 aa0.27□□□□□ -2.37
snR55snR55 TAF10Q12030 206 aa0.27□□□□□ -2.37
snR55snR55 UBA3Q99344 299 aa0.27□□□□□ -2.37
snR55snR55 DAP2P18962 818 aa0.26□□□□□ -2.37
snR55snR55 SCO1P23833 295 aa0.26□□□□□ -2.37
snR55snR55 LSM4P40070 187 aaKnown RBP0.26□□□□□ -2.37
snR55snR55 LSM5P40089 93 aaKnown RBP0.26□□□□□ -2.37
snR55snR55 HIT1P46973 164 aa0.26□□□□□ -2.37
snR55snR55 VPS72Q03388 795 aa0.26□□□□□ -2.37
snR55snR55 SHS1Q07657 551 aa0.26□□□□□ -2.37
snR55snR55 AAD15Q08361 143 aa0.26□□□□□ -2.37
snR55snR55 YOL163WP0CF20 169 aa0.25□□□□□ -2.37
snR55snR55 NFU1P32860 256 aa0.25□□□□□ -2.37
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms