RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W BUD5P25300 642 aaPredicted RBP3.48□□□□□ -1.85
SWI1YPL016W TCA17P32613 152 aa3.48□□□□□ -1.85
SWI1YPL016W CLB6P32943 380 aa3.48□□□□□ -1.85
SWI1YPL016W TVP38P36164 337 aa3.48□□□□□ -1.85
SWI1YPL016W PRS3P38689 320 aaKnown RBP3.48□□□□□ -1.85
SWI1YPL016W PAN5P38787 379 aa3.48□□□□□ -1.85
SWI1YPL016W NSG1P38837 291 aa3.48□□□□□ -1.85
SWI1YPL016W YNR021WP53723 404 aaKnown RBP3.48□□□□□ -1.85
SWI1YPL016W CDC14Q00684 551 aa3.48□□□□□ -1.85
SWI1YPL016W PRP38Q00723 242 aaPredicted RBP3.48□□□□□ -1.85
SWI1YPL016W ARG5,6Q01217 863 aa3.48□□□□□ -1.85
SWI1YPL016W EST3Q03096 181 aa3.48□□□□□ -1.85
SWI1YPL016W TRM12Q04235 462 aa3.48□□□□□ -1.85
SWI1YPL016W YPR109WQ06104 294 aa3.48□□□□□ -1.85
SWI1YPL016W THI73Q07904 523 aa3.48□□□□□ -1.85
SWI1YPL016W LEU9Q12166 604 aaKnown RBP3.48□□□□□ -1.85
SWI1YPL016W JLP1Q12358 412 aa3.48□□□□□ -1.85
SWI1YPL016W AI4P03878 556 aa3.47□□□□□ -1.85
SWI1YPL016W ACE2P21192 770 aa3.47□□□□□ -1.85
SWI1YPL016W RFA1P22336 621 aaKnown RBP3.47□□□□□ -1.85
SWI1YPL016W SSS1P35179 80 aa3.47□□□□□ -1.85
SWI1YPL016W MRPL28P36527 147 aa3.47□□□□□ -1.85
SWI1YPL016W GAA1P39012 614 aa3.47□□□□□ -1.85
SWI1YPL016W MET30P39014 640 aa3.47□□□□□ -1.85
SWI1YPL016W HXT9P40885 567 aa3.47□□□□□ -1.85
SWI1YPL016W SKP2P42843 763 aa3.47□□□□□ -1.85
SWI1YPL016W PMT6P42934 759 aa3.47□□□□□ -1.85
SWI1YPL016W YJL163CP46996 555 aa3.47□□□□□ -1.85
SWI1YPL016W PAC10P48363 199 aa3.47□□□□□ -1.85
SWI1YPL016W NQM1P53228 333 aaPredicted RBP3.47□□□□□ -1.85
SWI1YPL016W YNL034WP53963 612 aa3.47□□□□□ -1.85
SWI1YPL016W HXT11P54862 567 aa3.47□□□□□ -1.85
SWI1YPL016W RHO3Q00245 231 aaKnown RBP3.47□□□□□ -1.85
SWI1YPL016W OAZ1Q02803 292 aa3.47□□□□□ -1.85
SWI1YPL016W RRN5Q02983 363 aa3.47□□□□□ -1.85
SWI1YPL016W EFR3Q03653 782 aaKnown RBP3.47□□□□□ -1.85
SWI1YPL016W RIF2Q06208 395 aa3.47□□□□□ -1.85
SWI1YPL016W PUS5Q06244 254 aa3.47□□□□□ -1.85
SWI1YPL016W SUE1Q06524 206 aa3.47□□□□□ -1.85
SWI1YPL016W PML1Q07930 204 aaPredicted RBP3.47□□□□□ -1.85
SWI1YPL016W SPC3Q12133 184 aa3.47□□□□□ -1.85
SWI1YPL016W FRE8Q12209 686 aa3.47□□□□□ -1.85
SWI1YPL016W HBN1Q96VH4 193 aa3.47□□□□□ -1.85
SWI1YPL016W AHC2P25649 128 aa3.47□□□□□ -1.85
SWI1YPL016W ACB1P31787 87 aa3.47□□□□□ -1.85
SWI1YPL016W GLC7P32598 312 aaKnown RBP3.47□□□□□ -1.85
SWI1YPL016W SCT1P32784 759 aa3.47□□□□□ -1.85
SWI1YPL016W TAT1P38085 619 aa3.47□□□□□ -1.85
SWI1YPL016W FLR1P38124 548 aa3.47□□□□□ -1.85
SWI1YPL016W LDH1P38139 375 aa3.47□□□□□ -1.85
SWI1YPL016W YPC1P38298 316 aa3.47□□□□□ -1.85
SWI1YPL016W LRO1P40345 661 aa3.47□□□□□ -1.85
SWI1YPL016W TIM44Q01852 431 aa3.47□□□□□ -1.85
SWI1YPL016W NUP49Q02199 472 aa3.47□□□□□ -1.85
SWI1YPL016W AIM33Q04516 312 aa3.47□□□□□ -1.85
SWI1YPL016W YLR358CO13565 187 aa3.47□□□□□ -1.85
SWI1YPL016W RPP2BP02400 110 aaKnown RBP3.47□□□□□ -1.85
SWI1YPL016W KIN28P06242 306 aa3.47□□□□□ -1.85
SWI1YPL016W MRPL44P19956 98 aa3.47□□□□□ -1.85
SWI1YPL016W MAK31P23059 88 aa3.47□□□□□ -1.85
SWI1YPL016W MEK1P24719 497 aaPredicted RBP3.47□□□□□ -1.85
SWI1YPL016W PER1P25625 357 aa3.47□□□□□ -1.85
SWI1YPL016W HEM3P28789 327 aa3.47□□□□□ -1.85
SWI1YPL016W YEF1P32622 495 aa3.47□□□□□ -1.85
SWI1YPL016W TUL1P36096 758 aa3.47□□□□□ -1.85
SWI1YPL016W IKI1P38874 309 aa3.47□□□□□ -1.85
SWI1YPL016W TAT2P38967 592 aa3.47□□□□□ -1.85
SWI1YPL016W AFG3P39925 761 aa3.47□□□□□ -1.85
SWI1YPL016W CFD1P40558 293 aa3.47□□□□□ -1.85
SWI1YPL016W YFL052WP43551 465 aa3.47□□□□□ -1.85
SWI1YPL016W GIM3P53900 129 aa3.47□□□□□ -1.85
SWI1YPL016W RPA49Q01080 415 aaPredicted RBP3.47□□□□□ -1.85
SWI1YPL016W YPL077CQ02831 240 aa3.47□□□□□ -1.85
SWI1YPL016W GIP3Q03016 1276 aa3.47□□□□□ -1.85
SWI1YPL016W YMR226CQ05016 267 aaKnown RBP3.47□□□□□ -1.85
SWI1YPL016W GAS2Q06135 555 aa3.47□□□□□ -1.85
SWI1YPL016W PUN1Q06991 263 aa3.47□□□□□ -1.85
SWI1YPL016W YJR112W-AQ3E743 109 aa3.47□□□□□ -1.85
SWI1YPL016W AMD1P15274 810 aaKnown RBP3.46□□□□□ -1.86
SWI1YPL016W RPI1P23250 407 aaKnown RBP3.46□□□□□ -1.86
SWI1YPL016W NRP1P32770 719 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
SWI1YPL016W PHD1P36093 366 aa3.46□□□□□ -1.86
SWI1YPL016W RCK1P38622 512 aa3.46□□□□□ -1.86
SWI1YPL016W PPE1P38796 400 aa3.46□□□□□ -1.86
SWI1YPL016W BAT1P38891 393 aaKnown RBP3.46□□□□□ -1.86
SWI1YPL016W SHU2P38957 223 aa3.46□□□□□ -1.86
SWI1YPL016W UIP3P39547 235 aa3.46□□□□□ -1.86
SWI1YPL016W RPN3P40016 523 aaKnown RBP3.46□□□□□ -1.86
SWI1YPL016W PRM10P42946 383 aa3.46□□□□□ -1.86
SWI1YPL016W DIA3P52290 468 aa3.46□□□□□ -1.86
SWI1YPL016W YNL181WP53878 407 aa3.46□□□□□ -1.86
SWI1YPL016W TOF2Q02208 771 aa3.46□□□□□ -1.86
SWI1YPL016W PEX25Q02969 394 aa3.46□□□□□ -1.86
SWI1YPL016W CTL1Q03220 320 aaKnown RBP3.46□□□□□ -1.86
SWI1YPL016W CSN9Q03981 162 aa3.46□□□□□ -1.86
SWI1YPL016W TPO3Q06451 622 aa3.46□□□□□ -1.86
SWI1YPL016W COQ10Q08058 207 aa3.46□□□□□ -1.86
SWI1YPL016W NAT5Q08689 176 aa3.46□□□□□ -1.86
SWI1YPL016W PRM4Q12498 284 aa3.46□□□□□ -1.86
SWI1YPL016W MHT1Q12525 324 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 79.1 ms