RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	YLR112W	Q12130	139 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	YOR029W	Q12243	111 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	PET20	Q99373	253 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	Q0144	Q9ZZW2	109 aa		3.17	□□□□□ -1.9
VAM10	YOR068C	THP2	O13539	261 aa	Known RBP	3.16	□□□□□ -1.9
VAM10	YOR068C	HTB1	P02293	131 aa	Known RBP	3.16	□□□□□ -1.9
VAM10	YOR068C	HTB2	P02294	131 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	LEU4	P06208	619 aa	Known RBP	3.16	□□□□□ -1.9
VAM10	YOR068C	RHO1	P06780	209 aa	Known RBP	3.16	□□□□□ -1.9
VAM10	YOR068C	COR1	P07256	457 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	RPS28B	P0C0X0	67 aa	Known RBP	3.16	□□□□□ -1.9
VAM10	YOR068C	RPL42A	P0CX27	106 aa	Known RBP	3.16	□□□□□ -1.9
VAM10	YOR068C	RPL42B	P0CX28	106 aa	Known RBP	3.16	□□□□□ -1.9
VAM10	YOR068C	ERG9	P29704	444 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	SEC1	P30619	724 aa	Known RBP	3.16	□□□□□ -1.9
VAM10	YOR068C	YBL010C	P32788	280 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	MTR2	P34232	184 aa	Known RBP	3.16	□□□□□ -1.9
VAM10	YOR068C	MCH2	P36032	473 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	SCO2	P38072	301 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	RIB5	P38145	238 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	BNA4	P38169	460 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	ERG7	P38604	731 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	UBA4	P38820	440 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	PFS1	P38872	237 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	FAD1	P38913	306 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	ALP1	P38971	573 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	FET3	P38993	636 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	SER3	P40054	469 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	ALG8	P40351	577 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	HPM1	P40481	377 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	SYG1	P40528	902 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	SNL1	P40548	159 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	MRX5	P47007	382 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	YIP5	P53108	310 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	YNL234W	P53857	426 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	ALG11	P53954	548 aa	Known RBP	3.16	□□□□□ -1.9
VAM10	YOR068C	MPS1	P54199	764 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	SKI8	Q02793	397 aa	Predicted RBP	3.16	□□□□□ -1.9
VAM10	YOR068C	CTL1	Q03220	320 aa	Known RBP	3.16	□□□□□ -1.9
VAM10	YOR068C	COX20	Q04935	205 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	CDC123	Q05791	360 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	YET3	Q07451	203 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	DIS3	Q08162	1001 aa	Known RBP	3.16	□□□□□ -1.9
VAM10	YOR068C	GEP3	Q08622	556 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	RPS10A	Q08745	105 aa	Predicted RBP	3.16	□□□□□ -1.9
VAM10	YOR068C	RPN6	Q12377	434 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	RTR2	Q12378	196 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	EMP46	Q12396	444 aa		3.16	□□□□□ -1.9
VAM10	YOR068C	RPS28A	Q3E7X9	67 aa	Predicted RBP	3.16	□□□□□ -1.9
VAM10	YOR068C	EDE1	P34216	1381 aa		3.15	□□□□□ -1.9
VAM10	YOR068C	QCR7	P00128	127 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	REP1	P03871	373 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	YBR121C-A	P0C5L4	52 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	CBS2	P14905	389 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	URA4	P20051	364 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	DAL82	P21705	255 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	AAT2	P23542	418 aa	Known RBP	3.15	□□□□□ -1.91
VAM10	YOR068C	MGR1	P25573	417 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	YCR101C	P25607	182 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	SNC1	P31109	117 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	ECM25	P32525	599 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	KAR9	P32526	644 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	CDC13	P32797	924 aa	Known RBP	3.15	□□□□□ -1.91
VAM10	YOR068C	VAM7	P32912	316 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	PDR3	P33200	976 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	ASK1	P35734	292 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	RIP-Chip
VAM10	YOR068C	DER1	P38307	211 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	VHC1	P38329	1120 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	LAG1	P38703	411 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	POP1	P41812	875 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	YGR201C	P42936	225 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	COS4	P43542	379 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	RPS10B	P46784	105 aa	Known RBP	3.15	□□□□□ -1.91
VAM10	YOR068C	AIM22	P47051	409 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	ASN2	P49090	572 aa	Known RBP	3.15	□□□□□ -1.91
VAM10	YOR068C	YGL235W	P53071	178 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	YGL108C	P53139	140 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	YGL082W	P53155	381 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	NQM1	P53228	333 aa	Predicted RBP	3.15	□□□□□ -1.91
VAM10	YOR068C	SHY1	P53266	389 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	OKP1	P53298	406 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	NOP19	P53317	196 aa	Predicted RBP	3.15	□□□□□ -1.91
VAM10	YOR068C	OCA2	P53949	197 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	SPP2	Q02521	185 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	MSC1	Q03104	513 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	IZH1	Q03419	316 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	YMR114C	Q04471	368 aa	Known RBP	3.15	□□□□□ -1.91
VAM10	YOR068C	YMR310C	Q04867	317 aa	Predicted RBP	3.15	□□□□□ -1.91
VAM10	YOR068C	POS5	Q06892	414 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	SSK1	Q07084	712 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	NSE1	Q07913	336 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	YOR365C	Q08844	703 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	YPL199C	Q08954	240 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	AFT2	Q08957	416 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	ATX2	Q12067	313 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	YPL150W	Q12152	901 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	TPT1	Q12272	230 aa	Known RBP	3.15	□□□□□ -1.91
VAM10	YOR068C	SFM1	Q12314	213 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	IES3	Q12345	250 aa		3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 173.6 ms