RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W CTF8P38877 133 aa3.51□□□□□ -1.85
ROD1YOR018W PRP39P39682 629 aaKnown RBP3.51□□□□□ -1.85
ROD1YOR018W THO1P40040 218 aaKnown RBP3.51□□□□□ -1.85
ROD1YOR018W MPC1P53157 130 aaKnown RBP3.51□□□□□ -1.85
ROD1YOR018W YGR067CP53243 804 aa3.51□□□□□ -1.85
ROD1YOR018W DBP6P53734 629 aaKnown RBP3.51□□□□□ -1.85
ROD1YOR018W SNZ1Q03148 297 aa3.51□□□□□ -1.85
ROD1YOR018W SEI1Q06058 285 aa3.51□□□□□ -1.85
ROD1YOR018W PRP46Q12417 451 aaPredicted RBP3.51□□□□□ -1.85
ROD1YOR018W PSF1Q12488 208 aa3.51□□□□□ -1.85
ROD1YOR018W TPK3P05986 398 aa3.51□□□□□ -1.85
ROD1YOR018W GPH1P06738 902 aaKnown RBP3.51□□□□□ -1.85
ROD1YOR018W ENA1P13587 1091 aa3.51□□□□□ -1.85
ROD1YOR018W EMP70P32802 667 aa3.51□□□□□ -1.85
ROD1YOR018W SSZ1P38788 538 aaKnown RBP3.51□□□□□ -1.85
ROD1YOR018W YHR097CP38809 366 aaKnown RBP3.51□□□□□ -1.85
ROD1YOR018W RRG9P40156 214 aa3.51□□□□□ -1.85
ROD1YOR018W NAS2P40555 220 aa3.51□□□□□ -1.85
ROD1YOR018W SMK1P41808 388 aa3.51□□□□□ -1.85
ROD1YOR018W IRC7P43623 340 aa3.51□□□□□ -1.85
ROD1YOR018W EMC2P47133 292 aaKnown RBP3.51□□□□□ -1.85
ROD1YOR018W VMA10P48836 114 aaKnown RBP3.51□□□□□ -1.85
ROD1YOR018W NUP57P48837 541 aa3.51□□□□□ -1.85
ROD1YOR018W TOM22P49334 152 aa3.51□□□□□ -1.85
ROD1YOR018W SEH1P53011 349 aaKnown RBP3.51□□□□□ -1.85
ROD1YOR018W COS1P53822 381 aa3.51□□□□□ -1.85
ROD1YOR018W ENA2Q01896 1091 aa3.51□□□□□ -1.85
ROD1YOR018W YGK3Q12222 375 aaPredicted RBP3.51□□□□□ -1.85
ROD1YOR018W ENA5Q12691 1091 aa3.51□□□□□ -1.85
ROD1YOR018W YKL033W-AQ86ZR7 236 aa3.51□□□□□ -1.85
ROD1YOR018W RIB3Q99258 208 aa3.51□□□□□ -1.85
ROD1YOR018W YSF3P0C074 85 aaPredicted RBP3.5□□□□□ -1.85
ROD1YOR018W RPL40AP0CH08 128 aaKnown RBP3.5□□□□□ -1.85
ROD1YOR018W RPL40BP0CH09 128 aaKnown RBP3.5□□□□□ -1.85
ROD1YOR018W ERD2P18414 219 aa3.5□□□□□ -1.85
ROD1YOR018W ERG4P25340 473 aa3.5□□□□□ -1.85
ROD1YOR018W GAR1P28007 205 aaKnown RBP3.5□□□□□ -1.85
ROD1YOR018W YJU2P28320 278 aaPredicted RBP3.5□□□□□ -1.85
ROD1YOR018W NDC1P32500 655 aa3.5□□□□□ -1.85
ROD1YOR018W MDL1P33310 695 aa3.5□□□□□ -1.85
ROD1YOR018W SEF1P34228 1148 aa3.5□□□□□ -1.85
ROD1YOR018W LOT5P34234 306 aa3.5□□□□□ -1.85
ROD1YOR018W LHS1P36016 881 aa3.5□□□□□ -1.85
ROD1YOR018W VPS52P39904 641 aa3.5□□□□□ -1.85
ROD1YOR018W YJL068CP40363 299 aa3.5□□□□□ -1.85
ROD1YOR018W ICE2P40499 491 aa3.5□□□□□ -1.85
ROD1YOR018W MSS2P40990 351 aa3.5□□□□□ -1.85
ROD1YOR018W EFM3P47163 339 aa3.5□□□□□ -1.85
ROD1YOR018W YJR141WP47172 347 aaPredicted RBP3.5□□□□□ -1.85
ROD1YOR018W RBG2P53295 368 aaKnown RBP3.5□□□□□ -1.85
ROD1YOR018W TLG1Q03322 224 aa3.5□□□□□ -1.85
ROD1YOR018W YMD8Q03697 442 aa3.5□□□□□ -1.85
ROD1YOR018W YPR091CQ06833 770 aa3.5□□□□□ -1.85
ROD1YOR018W SIA1Q12212 622 aa3.5□□□□□ -1.85
ROD1YOR018W PST2Q12335 198 aaKnown RBP3.5□□□□□ -1.85
ROD1YOR018W TMA17Q12513 150 aa3.5□□□□□ -1.85
ROD1YOR018W KGD1P20967 1014 aaKnown RBP3.5□□□□□ -1.85
ROD1YOR018W HIR2P32480 875 aa3.5□□□□□ -1.85
ROD1YOR018W PRP21P32524 280 aaPredicted RBP3.5□□□□□ -1.85
ROD1YOR018W CIN1P40987 1014 aa3.5□□□□□ -1.85
ROD1YOR018W SNM1P40993 198 aa3.5□□□□□ -1.85
ROD1YOR018W BPL1P48445 690 aaPredicted RBP3.5□□□□□ -1.85
ROD1YOR018W SLD3P53135 668 aa3.5□□□□□ -1.85
ROD1YOR018W ASI1P54074 624 aa3.5□□□□□ -1.85
ROD1YOR018W YKR011CQ02209 353 aa3.5□□□□□ -1.85
ROD1YOR018W SPO19Q03029 223 aa3.5□□□□□ -1.85
ROD1YOR018W MAK3Q03503 176 aa3.5□□□□□ -1.85
ROD1YOR018W TPP1Q03796 238 aa3.5□□□□□ -1.85
ROD1YOR018W NBA1Q08229 501 aaKnown RBP3.5□□□□□ -1.85
ROD1YOR018W RKM1Q08961 583 aaPredicted RBP3.5□□□□□ -1.85
ROD1YOR018W FRE7Q12333 620 aa3.5□□□□□ -1.85
ROD1YOR018W MHF1Q3E835 90 aa3.5□□□□□ -1.85
ROD1YOR018W NCP1P16603 691 aaKnown RBP3.49□□□□□ -1.85
ROD1YOR018W DBP3P20447 523 aaKnown RBP3.49□□□□□ -1.85
ROD1YOR018W CPR2P23285 205 aa3.49□□□□□ -1.85
ROD1YOR018W ITR2P30606 609 aa3.49□□□□□ -1.85
ROD1YOR018W REC104P33323 182 aa3.49□□□□□ -1.85
ROD1YOR018W WBP1P33767 430 aaKnown RBP3.49□□□□□ -1.85
ROD1YOR018W ECM4P36156 370 aa3.49□□□□□ -1.85
ROD1YOR018W OM14P38325 134 aa3.49□□□□□ -1.85
ROD1YOR018W SOP4P39543 234 aaPredicted RBP3.49□□□□□ -1.85
ROD1YOR018W YEL068CP39977 110 aa3.49□□□□□ -1.85
ROD1YOR018W CAF16P43569 289 aa3.49□□□□□ -1.85
ROD1YOR018W ALB1P47019 175 aaPredicted RBP3.49□□□□□ -1.85
ROD1YOR018W RPS12P48589 143 aaKnown RBP3.49□□□□□ -1.85
ROD1YOR018W SWP1Q02795 286 aa3.49□□□□□ -1.85
ROD1YOR018W ATG21Q02887 496 aa3.49□□□□□ -1.85
ROD1YOR018W GIS1Q03833 894 aa3.49□□□□□ -1.85
ROD1YOR018W SMA2Q04658 369 aa3.49□□□□□ -1.85
ROD1YOR018W PAL1Q05518 499 aaKnown RBP3.49□□□□□ -1.85
ROD1YOR018W BRE4Q07660 1125 aa3.49□□□□□ -1.85
ROD1YOR018W YDL211CQ12121 372 aa3.49□□□□□ -1.85
ROD1YOR018W YDR061WQ12298 539 aa3.49□□□□□ -1.85
ROD1YOR018W YOL162WP0CF19 215 aa3.49□□□□□ -1.85
ROD1YOR018W KSS1P14681 368 aa3.49□□□□□ -1.85
ROD1YOR018W ORC2P32833 620 aa3.49□□□□□ -1.85
ROD1YOR018W NUF2P33895 451 aa3.49□□□□□ -1.85
ROD1YOR018W VPS51P36116 164 aa3.49□□□□□ -1.85
ROD1YOR018W MRPL15P36523 253 aa3.49□□□□□ -1.85
ROD1YOR018W YBR139WP38109 508 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms